ID: mmu-mir-7065
GENE: Cul4a(12)
chr8:13135920-13136182+


(1)
AGO.mut
(3)
AGO1.ip
(24)
AGO2.ip
(2)
AGO3.ip
(3)
B-CELL
(40)
BRAIN
(6)
CELL-LINE
(3)
DCR.mut
(2)
DGCR8.mut
(16)
EMBRYO
(7)
ESC
(7)
FIBROBLAST
(6)
HEART
(2)
KIDNEY
(18)
LIVER
(1)
LUNG
(2)
LYMPH
(17)
OTHER
(11)
OTHER.mut
(1)
OVARY
(1)
PANCREAS
(2)
PIWI.ip
(2)
PIWI.mut
(7)
SKIN
(5)
SPLEEN
(29)
TESTES
(3)
THYMUS
(1)
TOTAL-RNA
(2)
UTERUS

Sense strand
ACTGGAGAGGATCCTGGACAAGATCATGATTCTCTTCCGTTTCATCCATGGTGAGGAAGGAGGGGCTGTGGGGCCAGACGAGCCTGCAAACCTGCATTCAGAGGGAAAAATGGTCCCCGAACACGGAAGTAGTACTCAAGGAGATTTTTGTCCATGGAGTGTAGCAGGTAAACCAGGAATCTCTCTCAGGTCTTGGTTTTCCTGTTTGCACAGGTAAAGATGTCTTTGAAGCGTTTTATAAGAAAGACTTAGCAAAAAGGCTG
..............................................................................................................................................................((((((((((.((((((((.((((.....)))))))))))).)))))).))))....................................................
.....................................................................................................................................................150............................................................213................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjLiverKO2()
Liver Data. (Zcchc11 liver)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR206940(GSM723281)
other. (brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR206939(GSM723280)
other. (brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR206941(GSM723282)
other. (brain)
mjTestesWT4()
Testes Data. (testes)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR073954(GSM629280)
total RNA. (blood)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
mjLiverWT1()
Liver Data. (liver)
SRR206942(GSM723283)
other. (brain)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
mjTestesWT2()
Testes Data. (testes)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesWT3()
Testes Data. (testes)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR059768(GSM562830)
Treg_control. (spleen)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR077865(GSM637802)
18-30 nt small RNAs. (liver)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR306529(GSM750572)
19-24nt. (ago2 brain)
SRR037906(GSM510442)
brain_rep3. (brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR077864(GSM637801)
18-30 nt small RNAs. (liver)
GSM475281(GSM475281)
total RNA. (testes)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
SRR037928(GSM510466)
e7p5_rep2. (embryo)
SRR306526(GSM750569)
19-24nt. (ago2 brain)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR306527(GSM750570)
19-24nt. (ago2 brain)
SRR073955(GSM629281)
total RNA. (blood)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR095855BC8(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR038740(GSM527275)
small RNA-Seq. (dicer brain)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
GSM317183(GSM317183)
Ago-1 IP small RNAs from mouse brain. (ago1 brain)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
mjLiverWT3()
Liver Data. (liver)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
GSM416732(GSM416732)
MEF. (cell line)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR525243(SRA056111/SRX170319)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR037907(GSM510443)
brain_rep4. (brain)
SRR037929(GSM510467)
e7p5_rep3. (embryo)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
SRR095853(SRX039174)
sequencing of miRNA from wild type and diseas. (heart)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR037922(GSM510460)
e12p5_rep4. (embryo)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR525242(SRA056111/SRX170318)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR306528(GSM750571)
19-24nt. (ago2 brain)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)
SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
GSM261959(GSM261959)
oocytesmallRNA-19to30. (oocyte)
SRR037897(GSM510433)
ovary_rep2. (ovary)
SRR065050(SRR065050)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR059767(GSM562829)
DN3_Dicer. (thymus)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR553586(SRX182792)
source: Testis. (testes)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)
GSM640583(GSM640583)
small RNA in the liver with paternal Low prot. (liver)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR037930(GSM510468)
e7p5_rep4. (embryo)
GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)
SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)
SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGT.................................................222241.5017.0031.00-8.004.50-8.00--8.007.009.004.502.502.0010.00-1.008.507.004.506.503.003.503.504.00-3.006.504.001.50-3.002.504.00-0.50-2.004.002.503.502.002.503.000.500.502.000.50-2.50--2.503.001.00--1.500.501.00-1.000.501.000.501.001.000.500.501.001.001.002.001.001.501.00-2.00---0.501.001.001.500.500.500.501.000.501.00-0.501.50-0.500.500.501.001.00-0.50-1.00---0.50-------1.001.00--1.00-------------0.50---1.00-----0.500.500.500.500.500.50-0.500.50----0.50-0.50-0.500.500.500.500.50-0.500.500.50-----
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGA.................................................222172.5017.0088.50-9.007.00-3.50--3.004.50-4.504.504.00---0.50-1.00-3.000.502.000.500.502.500.500.501.00------1.000.50----1.50--0.50-0.50--0.50---0.503.00-1.50-0.502.501.000.501.00-1.50--0.500.50-----------0.500.50---0.50---0.500.500.50-1.50------------0.50-1.000.501.00--------0.50----1.00--1.00---1.00----------------0.50---0.50-----------0.50---0.500.50--0.50
..................................................GTGAGGAAGGAGGGGCTGTGGGGCCAGACGAGCCTGCAAACCTGCATTCAGA.................................................................................................................................................................52167.0067.00-67.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACACC.................................................22222.005.507.50-1.50--2.00--1.00---------0.502.00--1.001.50--0.50--0.50------------0.50--0.50-1.50--------------------------------------------0.50----------------------------------------0.50--------------------------------------0.50-
..........................................................................................................................................................TGGAGTGTAGCAGGTAAACCAGA......................................................................................23121.003.00----21.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAG..................................................21217.0017.003.50--0.50----0.501.001.500.50--0.501.00--1.50---1.00---0.50-----1.00--------2.50-----------------0.50---0.50--------------------------------0.50-----------------------------------------------------------------------------
.............................................................................................................................................................AGTGTAGCAGGTAAACCAGGA.....................................................................................21116.0016.00--1.00---------1.00--1.001.00-----------1.00----1.00---------------1.00-2.00------------1.00--------------2.00-----------1.00----------------------------------1.001.00---1.00------------------------------------------
.......................................................................................................................................................................................................................AAAGATGTCTTTGAAGCGTTTT..........................22114.0014.00-------7.00--------3.00--------4.00----------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................AGTGTAGCAGGTAAACCAGGAATCTCT...............................................................................27113.0013.00------13.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGTT................................................23212.5017.002.50---------0.500.50--0.50-0.50--1.00-0.50-0.500.50----0.50----1.00----0.50----0.50-------0.50--------------------1.00-0.50-------------0.50--------0.50---------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGC.................................................22212.5017.005.50-1.00--0.50--0.50----0.50-------0.50-0.50-----0.50-----1.00----------0.50-0.50----------------------------------------0.50--------------------0.50---------------------------------------------------------------
..........................................................................................................................................................TGGAGTGTAGCAGGTAAACCAGG......................................................................................2319.009.004.00-1.001.00---------1.00----------------------2.00-----------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................AAAGATGTCTTTGAAGCGTTTTAT........................2418.008.00---1.00---5.00-----------------2.00----------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................AAAGATGTCTTTGAAGCGT.............................1918.008.00---2.00---1.00----1.001.00-3.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................TGGTTTTCCTGTTTGCACAGA.................................................217.000.004.00-1.002.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGTA................................................2326.5017.001.50--1.00-1.00---------------------------0.50----0.50-----------------------0.50-----------0.50-------0.50-----0.50-------------------------------------------------------------------------------------
..................................................GTGAGGAAGGAGGGGCTGTGGG...............................................................................................................................................................................................2216.006.00------------------------------6.00-----------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACA...................................................2025.505.50-----1.00----0.50---------2.00------------------------0.50-------------0.50------------------------------------0.50--------------------------------------------------------------0.50--------------
...............................................................................................................................................................................................................................................AAGAAAGACTTAGCAAAAAGGCT.2325.005.00---1.50--------1.001.00--1.50-------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................GTTTTCCTGTTTGCACAGT.................................................195.000.00--------------------------------------------2.00--------------------------------------1.00-----------1.00----------------------------------------1.00-------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCAC....................................................1924.004.00--------0.50-------------------------------1.00-------------0.50--------------0.50----------------0.50---------------------------1.00-----------------------------------------------------------
.............................................................................................................................................................AGTGTAGCAGGTAAACCAGGAA....................................................................................2214.004.00-------------------------------3.00----------------------------------1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................AGTGTAGCAGGTAAACCAGGAAA...................................................................................2314.004.00---------------1.00----------------2.00-----------------------------------------------1.00---------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGTAG...............................................2423.5017.002.00-------------------------0.50---------0.50--------------------------------------------------------------------------------------------------------------------------------------0.50--
.................................................................................................................................................................................................TGGTTTTCCTGTTTGCACAGT.................................................213.000.00---------------------1.00-----------------------2.00--------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................TGTAGCAGGTAAACCAGGAATCTCT...............................................................................2523.003.00------3.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................TGGAGTGTAGCAGGTAAACCAG.......................................................................................2213.003.001.00-2.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........GATCCTGGACAAGATCATG...........................................................................................................................................................................................................................................1912.002.00------------------------------------------------2.00-----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................GAGTGTAGCAGGTAAACCAGGA.....................................................................................2212.002.00---------------1.00--------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................TGGTTTTCCTGTTTGCACAGTT................................................222.000.00-----------------------------------------------------------------------------------------------------------------1.00--------------------------1.00---------------------------------
...............................................................................................................................................................................................CTTGGTTTTCCTGTTTGCACAGT.................................................232.000.00----------------------------1.00-------------------------------------------------------------------------------------------------------------1.00-----------------------------------
....................................................................................................................................................................................................................GGTAAAGATGTCTTTGAAGCGTTTTAT........................2712.002.00-------------------------------------2.00----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................CCCGAACACGGAAGTTAA..................................................................................................................................182.000.00----------------------------------2.00-------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................CCCGAACACGGAAGTTAAG.................................................................................................................................192.000.00---------------1.00----------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................ATAAGAAAGACTTAGCAAAAAGGCT.2512.002.00------------1.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................GAGTGTAGCAGGTAAACCAGG......................................................................................2112.002.00---------------------------------------------------------------------------------1.00---------------1.00----------------------------------------------------------------------------
..........................................................................................................................................................TGGAGTGTAGCAGGTAAACC.........................................................................................2012.002.00--1.00-----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................GTCTTGGTTTTCCTGTTTGCAC....................................................2222.002.00------------------------------------------------------------------------------------0.50------------------------------------------------------1.00--------------0.50-------------------
.............CTGGACAAGATCATGAC.........................................................................................................................................................................................................................................172.000.00--------------------------------------------------2.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAC..................................................2122.005.500.50--------------------0.50-------0.50---------------------------------------------0.50--------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GGTAAAGATGTCTTTGAAGCGT.............................2212.002.00---------------2.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................TCATGATTCTCTTCCGTTTCAT..........................................................................................................................................................................................................................2212.002.00----------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AAGATGTCTTTGAAGCGTTTT..........................2112.002.00-------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................TATAAGAAAGACTTAGCAAAAAGGC..2512.002.00----------------------------------------------------------------------------2.00-------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................TGGTTTTCCTGTTTGCACACC.................................................212.000.001.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCA.....................................................1831.001.00------------------------------------------------------------------0.33--------------------------------0.33-0.33------------------------------------------------------------------------
.........................................................................................................................................................ATGGAGTGTAGCAGGTAAA...........................................................................................1911.001.00---------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------
..............................................................................................................................................................................................TCTTGGTTTTCCTGTTTGCACAGA.................................................241.000.00---------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
...........................GATTCTCTTCCGTTTCATCCA.......................................................................................................................................................................................................................2111.001.00--------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGAT................................................2321.0017.000.50-----------------------0.50-----------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................AGTGTAGCAGGTAAACCAGGAATA..................................................................................241.000.00---------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------
..........................................................................................................................................................TGGAGTGTAGCAGGTAAACCA........................................................................................2111.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGTTT...............................................2421.0017.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................GAGGAAGGAGGGGCTGACGT...............................................................................................................................................................................................201.000.00--------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................GTCTTGGTTTTCCTGTTTGCACAGTT................................................261.000.00------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGGAAGGAGGGGCTCTA.................................................................................................................................................................................................191.000.00--------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
............................ATTCTCTTCCGTTTCATCCATGGT...................................................................................................................................................................................................................2411.001.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......AGGATCCTGGACAAGATCATGA..........................................................................................................................................................................................................................................2211.001.00----------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------
.........................................................................................................................................................................................................................................TTTTATAAGAAAGACTTAGCA.........2111.001.00-----------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................TGGAGTGTAGCAGGTAAACCAA.......................................................................................2211.001.00-------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------
............................................................AGGGGCTGTGGGGCCAGACGAGCCTGCA...............................................................................................................................................................................2811.001.00---------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................CCCGAACACGGAAGTGAAA.................................................................................................................................191.000.00----------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGTAT...............................................2421.0017.00-------------------0.50-----------------------------------------------------------------0.50----------------------------------------------------------------------------------------
.............................................................................................................................................................AGTGTAGCAGGTAAACCAGG......................................................................................2011.001.00-----------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................TGGAGTGTAGCAGGTAAACCAGGT.....................................................................................2411.009.00----------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
........................................................................................................................................................CATGGAGTGTAGCAGGTAAACCAGGAAT...................................................................................2811.001.00----------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------
................................................................................................................................................TTTTTGTCCATGGAGTGTAGCAGGTA.............................................................................................2611.001.00---------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------
..TGGAGAGGATCCTGGACAAGATCATG...........................................................................................................................................................................................................................................2611.001.00----------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------
.......................................................................................................................................................................................................................AAAGATGTCTTTGAAGCG..............................1811.001.00----------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................AAAGATGTCTTTGAAGCGTTT...........................2111.001.00----------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................AGTGTAGCAGGTAAACCAG.......................................................................................1911.001.00----------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------
.................................................................................................................................................................................................TGGTTTTCCTGTTTGCACAAAGA...............................................231.000.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................TGGTTTTCCTGTTTGCACAGTA................................................221.000.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...GGAGAGGATCCTGGACAAGATCAT............................................................................................................................................................................................................................................2411.001.00-------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................AGTGTAGCAGGTAAACCAGGAT....................................................................................2211.0016.00----------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................GTCTTTGAAGCGTTTTAT........................1811.001.00----------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................AAGGAGGGGCTGTGGCATT............................................................................................................................................................................................191.000.00------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACACCA................................................2321.005.50---------0.50---------------------------------0.50----------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGGAAGGAGGGGCTGTGG................................................................................................................................................................................................2111.001.00------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................GAGTGTAGCAGGTAAACCA........................................................................................1911.001.00--------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------
....................................................GAGGAAGGAGGGGCTGCCGT...............................................................................................................................................................................................201.000.00----------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
..................CAAGATCATGATTCTCTTCCGT...............................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................TTTCCTGTTTGCACAGTA................................................181.000.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGGAAGGAGGGGCTGTGGGGCC............................................................................................................................................................................................2511.001.00---------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------
............................................................................................................................................................................................................................................TATAAGAAAGACTTAGCAAAAAGGCTG2711.001.00------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGAA................................................2321.0017.00---0.50---------------------------------------------------------------------------------0.50----------------------------------------------------------------------------------------
..................................................................................................................................................................................................GGTTTTCCTGTTTGCACCGA.................................................201.000.00-----------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................ATAAGAAAGACTTAGCAAA.......1911.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................GTTTTCCTGTTTGCACAGTTA...............................................211.000.00----------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGGAAGGAGGGGCATCT.................................................................................................................................................................................................191.000.00--------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
............................ATTCTCTTCCGTTTCATCCA.......................................................................................................................................................................................................................2011.001.00---------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------
...................................................TGAGGAAGGAGGGGCTATCG................................................................................................................................................................................................201.000.00--------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................AGTGTAGCAGGTAAACCAGGC.....................................................................................2111.001.00---------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
......GAGGATCCTGGACAAGAT...............................................................................................................................................................................................................................................1811.001.00-----------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................CCCCGAACACGGAAGTTA...................................................................................................................................181.000.00----------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................TGGAGTGTAGCAGGTAAACCAGGAAT...................................................................................2611.001.00----------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------
..........................................................................................................................................................TGGAGTGTAGCAGGTAAACCAGT......................................................................................2311.003.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GTAAAGATGTCTTTGAAGC...............................1911.001.00--------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGCT................................................2321.0017.000.50---------------------------------------------0.50-------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................TTTGTCCATGGAGTGTAGCAGGTAA............................................................................................2511.001.00--------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------
.............................................................................................................................................................AGTGTAGCAGGTAAACCAGGAAG...................................................................................2311.004.00-----------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................AGGAGATTTTTGTCCATGGAGTGTAGCAGGT..............................................................................................3111.001.00------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................TGGAGTGTAGCAGGTAAACAAGA......................................................................................231.000.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................CCCGAACACGGAAGTTA...................................................................................................................................171.000.00----------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------
...................................................................................................................................................................................................GTTTTCCTGTTTGCACAGA.................................................191.000.00--------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCCAG...................................................201.000.00-----------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------
...........................................................................................................................................................GGAGTGTAGCAGGTAAACCAGG......................................................................................2211.001.00------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------
...............................................................................................................................................................TGTAGCAGGTAAACCAGGAAT...................................................................................2120.500.50---------------------------------------0.50--------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACACCTT...............................................2420.505.50---------0.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACACCAT...............................................2420.505.50-----------------------------0.50------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................TGTAGCAGGTAAACCAGGAATA..................................................................................2220.500.50------------------------------------------------------------------------------------------------------------------------0.50-----------------------------------------------------
...............................................................................................................................................................TGTAGCAGGTAAACCAGGAATCT.................................................................................2320.500.50-----------------------------------------------------------------------------------------------------------------------------------------------------------0.50------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACCGC.................................................2220.504.00-----------------------------------0.50------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGAC................................................2320.5017.000.50-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACTCCA................................................2320.504.00------------------------0.50-----------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGG.................................................2220.500.500.50-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................ACAAGATCATGATTCTCT....................................................................................................................................................................................................................................1820.500.50-------------------------------------------------------------0.50----------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................TGTAGCAGGTAAACCAGGAATCTCTCT.............................................................................2720.500.50----------------------------0.50-------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGTAA...............................................2420.5017.000.50-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACAGATT...............................................2420.5017.00----------------------------------------------------------------------0.50-------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACGGT.................................................2220.504.00------------------------0.50-----------------------------------------------------------------------------------------------------------------------------------------------------
..............TGGACAAGATCATGAT.........................................................................................................................................................................................................................................1620.500.50-------------------------------------------------------------------0.50----------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACCG..................................................2120.504.000.50-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................GTCTTGGTTTTCCTGTTTGCACT...................................................2320.502.000.50-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................AAGAAAGACTTAGCAAAAAGGC..2220.500.50-------------0.50----------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACATTT................................................2320.505.50--------------------------------------------------------------------------------------------------------------------------------------------------------0.50---------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACACCT................................................2320.505.50-------------------------------------------0.50----------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................AGGTAAACCAGGAATCTC................................................................................1820.500.50-------------------------------------------------------------------------------------------------------------------------------------------------------------0.50----------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCACATA.................................................2220.505.50----------------------------------------------------------------------0.50-------------------------------------------------------------------------------------------------------
.....................................................AGGAAGGAGGGGCTGTGG................................................................................................................................................................................................1830.330.33-----------------------------------------------------------------------------------------------------0.33------------------------------------------------------------------------
................................................................................................................................................................................................TTGGTTTTCCTGTTTGCATAGT.................................................2230.331.00--------------------------------0.33---------------------------------------------------------------------------------------------------------------------------------------------
....GAGAGGATCCTGGACA...................................................................................................................................................................................................................................................1640.250.25------------0.25-----------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................TGGTGAGGAAGGAGGGG......................................................................................................................................................................................................1760.170.17----------------------------------------------------------------------------------------------------0.17-------------------------------------------------------------------------
....GAGAGGATCCTGGAC....................................................................................................................................................................................................................................................15100.100.10-----------0.10------------------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
ACTGGAGAGGATCCTGGACAAGATCATGATTCTCTTCCGTTTCATCCATGGTGAGGAAGGAGGGGCTGTGGGGCCAGACGAGCCTGCAAACCTGCATTCAGAGGGAAAAATGGTCCCCGAACACGGAAGTAGTACTCAAGGAGATTTTTGTCCATGGAGTGTAGCAGGTAAACCAGGAATCTCTCTCAGGTCTTGGTTTTCCTGTTTGCACAGGTAAAGATGTCTTTGAAGCGTTTTATAAGAAAGACTTAGCAAAAAGGCTG
..............................................................................................................................................................((((((((((.((((((((.((((.....)))))))))))).)))))).))))....................................................
.....................................................................................................................................................150............................................................213................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjLiverKO2()
Liver Data. (Zcchc11 liver)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR206940(GSM723281)
other. (brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR206939(GSM723280)
other. (brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR206941(GSM723282)
other. (brain)
mjTestesWT4()
Testes Data. (testes)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR073954(GSM629280)
total RNA. (blood)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
mjLiverWT1()
Liver Data. (liver)
SRR206942(GSM723283)
other. (brain)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
mjTestesWT2()
Testes Data. (testes)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesWT3()
Testes Data. (testes)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR059768(GSM562830)
Treg_control. (spleen)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR077865(GSM637802)
18-30 nt small RNAs. (liver)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR306529(GSM750572)
19-24nt. (ago2 brain)
SRR037906(GSM510442)
brain_rep3. (brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR077864(GSM637801)
18-30 nt small RNAs. (liver)
GSM475281(GSM475281)
total RNA. (testes)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
SRR037928(GSM510466)
e7p5_rep2. (embryo)
SRR306526(GSM750569)
19-24nt. (ago2 brain)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR306527(GSM750570)
19-24nt. (ago2 brain)
SRR073955(GSM629281)
total RNA. (blood)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR095855BC8(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR038740(GSM527275)
small RNA-Seq. (dicer brain)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
GSM317183(GSM317183)
Ago-1 IP small RNAs from mouse brain. (ago1 brain)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
mjLiverWT3()
Liver Data. (liver)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
GSM416732(GSM416732)
MEF. (cell line)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR525243(SRA056111/SRX170319)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR037907(GSM510443)
brain_rep4. (brain)
SRR037929(GSM510467)
e7p5_rep3. (embryo)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
SRR095853(SRX039174)
sequencing of miRNA from wild type and diseas. (heart)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR037922(GSM510460)
e12p5_rep4. (embryo)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR525242(SRA056111/SRX170318)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR306528(GSM750571)
19-24nt. (ago2 brain)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)
SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
GSM261959(GSM261959)
oocytesmallRNA-19to30. (oocyte)
SRR037897(GSM510433)
ovary_rep2. (ovary)
SRR065050(SRR065050)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR059767(GSM562829)
DN3_Dicer. (thymus)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR553586(SRX182792)
source: Testis. (testes)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)
GSM640583(GSM640583)
small RNA in the liver with paternal Low prot. (liver)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR037930(GSM510468)
e7p5_rep4. (embryo)
GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)
SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)
SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
.....................................................................GGGGCCAGACGAGCCGAA................................................................................................................................................................................ 181.000.00-----------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................AGCGTTTTATAAGAAGGTA............... 191.000.00--------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------
.CTGGAGAGGATCCTGGACAAGATCAC............................................................................................................................................................................................................................................ 261.000.00-----------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGGCCAGACGAGCCCAA................................................................................................................................................................................ 181.000.00-----------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
................GACAAGATCATGATTCTCTTCCGTTTCA........................................................................................................................................................................................................................... 2811.001.00---------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------
....................................CCGTTTCATCCATGGGACA................................................................................................................................................................................................................ 191.000.00------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------