ID: mmu-mir-7062
GENE: Adam8(14)
chr7:147172658-147172841-


(2)
AGO1.ip 		(3)
AGO2.ip 		(2)
AGO3.ip 		(2)
B-CELL 		(3)
BRAIN 		(3)
CELL-LINE 		(1)
DCR.mut 		(6)
EMBRYO 		(2)
ESC 		(2)
LIVER 		(3)
LYMPH 		(8)
OTHER 		(1)
OTHER.ip 		(4)
OTHER.mut 		(1)
PANCREAS 		(2)
PIWI.ip 		(7)
SKIN 		(3)
SPLEEN 		(12)
TESTES

Sense strand
TGGGAGCTGTCCCACCCTGGCACAGCAGTGCCGGGATCTGTGGGGGCCAGGTGAGGCAGACATGAGCATAGGATGGAGGCCAGCTTGTGGAGTGTCTATGACCTAAACCAGACTAACTTCTCCTGGCCCCACAGGTGCTCGGGTAGCAGCCGACTCCTGCTATACCTTTAGCATCCCTCCGGGC
.........................................................................(((.((((((.....(((((((((............))))..)))))..))))))))).....................................................
....................................................................69...............................................................134................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		mjTestesWT3()
Testes Data. (testes)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
.........................................................................TGGAGGCCAGCTTGTGGAGTGTCT.......................................................................................24135.0035.00-4.005.001.001.002.002.001.00-2.001.003.001.001.002.002.001.001.00-2.00-------1.00---------------1.00-1.00------
........................................................................ATGGAGGCCAGCTTGTGGAGTGTCT.......................................................................................25112.0012.002.00--1.001.00----2.00--1.00---------1.00------1.00---------1.00---------1.001.00-
........................................................................ATGGAGGCCAGCTTGTGGAGTGT.........................................................................................23112.0012.002.001.001.003.00--2.001.00--1.00---------------------------1.00-------------
.........................................................................TGGAGGCCAGCTTGTGGAGTGT.........................................................................................2218.008.00-1.00-----1.00--------1.00-----------1.00----1.001.00--1.00----1.00---------
.........................................................................TGGAGGCCAGCTTGTGGAGTGTC........................................................................................2315.005.00-1.001.00-1.00-1.001.00--------------------------------------------
........................................................................ATGGAGGCCAGCTTGTGGAGTGTC........................................................................................2415.005.002.00-1.00---------------1.00-------1.00-------------------------
...............................................................................................................ACTAACTTCTCCTGGCCCCACAG..................................................2313.003.00-1.00------1.00-------------------------------1.00-----------
..................................................GTGAGGCAGACATGAGCATAGGATGG............................................................................................................2613.003.00-----------------------1.00-----------------1.00--1.00-------
.........................................................................TGGAGGCCAGCTTGTGGAGT...........................................................................................2012.002.001.00-----------------------------------1.00---------------
........................................................................ATGGAGGCCAGCTTGTGGAGTGTCTT......................................................................................2612.0012.00------------------1.00----------------------------1.00----
.........................................................................TGGAGGCCAGCTTGTGGAGTGTCA.......................................................................................2412.005.00-----1.00--1.00-------------------------------------------
...............................................................................................................ACTAACTTCTCCTGGCCCCACAGT.................................................2412.003.00----1.00---------------------------1.00-------------------
................................................................................................................................................AGCAGCCGACTCCTGCCAG.....................191.000.00---------------------1.00------------------------------
........................................................................ATGGAGGCCAGCTTGTGGAGTG..........................................................................................2211.001.00--------------------1.00-------------------------------
...................................................TGAGGCAGACATGAGCATAGGATGGAT..........................................................................................................271.000.00-------------------------1.00--------------------------
.........................................................................TGGAGGCCAGCTTGTGGA.............................................................................................1811.001.00--------1.00-------------------------------------------
................................................................................................................................................AGCAGCCGACTCCTGCCGCG....................201.000.00------------------------------------------------1.00---
........................................................................ATGGAGGCCAGCTTGTGGAGTGTCTAT.....................................................................................2711.001.00----------1.00-----------------------------------------
.........................................................................TGGAGGCCAGCTTGTGGAG............................................................................................1911.001.00--------1.00-------------------------------------------
..................................................GTGAGGCAGACATGAGCATAGGATGGT...........................................................................................................2711.003.00-----------------------------------1.00----------------
..................................................GTGAGGCAGACATGAGCATAGGATG.............................................................................................................2511.001.001.00---------------------------------------------------
..................................................GTGAGGCAGACATGAGCATA..................................................................................................................2011.001.001.00---------------------------------------------------
..........................................................................GGAGGCCAGCTTGTGGAGTGT.........................................................................................2111.001.00-------------------------------1.00--------------------
..................................................GTGAGGCAGACATGAGCATAG.................................................................................................................2111.001.001.00---------------------------------------------------
........................................................................ATGGAGGCCAGCTTGTGGAGT...........................................................................................2111.001.00-------------1.00--------------------------------------
........................................................................ATGGAGGCCAGCTTGTGGAGTGAC........................................................................................2411.001.00-----------------1.00----------------------------------
...............................................................................................................ACTAACTTCTCCTGGCCCCAA....................................................211.000.001.00---------------------------------------------------
...............................................................................................................ACTAACTTCTCCTGGCCCCAC....................................................2111.001.00----------------------------------------------1.00-----
........................................................................ATGGAGGCCAGCTTGTGGAGTGTTT.......................................................................................2511.0012.001.00---------------------------------------------------
.......................................................................GATGGAGGCCAGCTTGTGGAGTGTCT.......................................................................................2611.001.00----1.00-----------------------------------------------
........................................................................ATGGAGGCCAGCTTGTGGAGTGA.........................................................................................2311.001.001.00---------------------------------------------------
.......................................................................GATGGAGGCCAGCTTGTGGAGTGA.........................................................................................241.000.001.00---------------------------------------------------
....................CACAGCAGTGCCGGGATCTGTAA.............................................................................................................................................231.000.00-----1.00----------------------------------------------
.........................................................................TGGAGGCCAGCTTGTGGAGTGGCT.......................................................................................241.000.00-------1.00--------------------------------------------
.......................................................................GATGGAGGCCAGCTTGTGGAGTGT.........................................................................................2411.001.00-----1.00----------------------------------------------
..........................................................................GGAGGCCAGCTTGTGGAGTGTC........................................................................................2211.001.001.00---------------------------------------------------
................................GGGATCTGTGGGGGCCAGGTG...................................................................................................................................2111.001.00-1.00--------------------------------------------------
........................................................................ATGGAGGCCAGCTTGTGGAGTGTCA.......................................................................................2511.005.001.00---------------------------------------------------
...............................................................................................................ACTAACTTCTCCTGGCCCCACAGA.................................................2411.003.00------------------------1.00---------------------------
...........................GTGCCGGGATCTGTGGGGG..........................................................................................................................................1911.001.00-1.00--------------------------------------------------

Antisense strand
TGGGAGCTGTCCCACCCTGGCACAGCAGTGCCGGGATCTGTGGGGGCCAGGTGAGGCAGACATGAGCATAGGATGGAGGCCAGCTTGTGGAGTGTCTATGACCTAAACCAGACTAACTTCTCCTGGCCCCACAGGTGCTCGGGTAGCAGCCGACTCCTGCTATACCTTTAGCATCCCTCCGGGC
.........................................................................(((.((((((.....(((((((((............))))..)))))..))))))))).....................................................
....................................................................69...............................................................134................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		mjTestesWT3()
Testes Data. (testes)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
.........................................GGGGGCCAGGTGAGGCCC............................................................................................................................. 181.000.00------------------------------1.00---------------------
................................................................................................................................................AGCAGCCGACTCCTGC........................ 1620.500.50---------------------------------------------------0.50