ID: mmu-mir-7059
GENE: Cln3(8)
chr7:133722938-133723187-


(5)
AGO1.ip 		(11)
AGO2.ip 		(2)
AGO3.ip 		(14)
B-CELL 		(31)
BRAIN 		(5)
CELL-LINE 		(3)
DCR.mut 		(2)
DGCR8.mut 		(11)
EMBRYO 		(7)
ESC 		(5)
FIBROBLAST 		(2)
HEART 		(3)
KIDNEY 		(13)
LIVER 		(1)
LUNG 		(5)
LYMPH 		(29)
OTHER 		(8)
OTHER.mut 		(2)
OVARY 		(3)
PANCREAS 		(3)
PIWI.ip 		(2)
PIWI.mut 		(6)
SKIN 		(10)
SPLEEN 		(24)
TESTES 		(1)
THYMUS 		(2)
TOTAL-RNA 		(2)
UTERUS

Sense strand
TTAACTGAATGAAGATGGGGGTACAGTCTCGGAGAGGACATGTGGAGGAGGGTGTGGCTTTTCAGATGAGACCCTAGCCTGTCTGTTCAGTGACAGATCTGTTCTTAGCCCTGCTGAGCTGATGGAGTTGAGGCTGTAAACAAACCACCGGGGACTGCGGCTTTCAGTTAAAGGTCACTGTTTGCTGTTTGTCCTCCCAGGAGTGGTTTTGGCCAGCATCTCCTCAGGGCTAGGGGAGGTCACCTTCCTC
.....................................................................................................................................................((((((.(((((...((((........))))...)))))..))))))......................................................
.............................................................................................................................................142.......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		mjLiverWT2()
Liver Data. (liver)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjLiverWT1()
Liver Data. (liver)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		mjTestesWT4()
Testes Data. (testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR553585(SRX182791)
source: Kidney. (Kidney)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR553582(SRX182788)
source: Brain. (Brain)		mjTestesWT1()
Testes Data. (testes)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR525242(SRA056111/SRX170318)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR060845(GSM561991)
total RNA. (brain)		SRR525243(SRA056111/SRX170319)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		mjTestesWT3()
Testes Data. (testes)		mjTestesWT2()
Testes Data. (testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR525241(SRA056111/SRX170317)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR206940(GSM723281)
other. (brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)		mjLiverWT3()
Liver Data. (liver)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR095853(SRX039174)
sequencing of miRNA from wild type and diseas. (heart)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)		SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR206941(GSM723282)
other. (brain)		SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		GSM510444(GSM510444)
brain_rep5. (brain)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR038744(GSM527279)
small RNA-Seq. (brain)		GSM475281(GSM475281)
total RNA. (testes)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR525239(SRA056111/SRX170315)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR037898(GSM510434)
ovary_rep3. (ovary)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR206939(GSM723280)
other. (brain)		SRR346415(SRX098256)
source: Testis. (Testes)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR023848(GSM307157)
mEFsmallrna_rep1. (cell line)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR037937(GSM510475)
293cand2. (cell line)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGT..................................................................................2211187.001187.00126.00113.00124.0049.0021.0041.0024.0017.0022.0025.0025.0021.00---15.0013.00-11.0016.0017.0016.0014.0017.0012.0017.0014.009.0020.0010.0012.0017.0013.0017.0015.00-10.007.0016.00-11.008.009.007.007.004.006.006.005.001.006.005.00-3.007.004.007.005.006.008.006.00-3.006.005.004.004.005.00-3.001.003.004.004.00-2.003.003.005.00-2.001.001.001.004.002.002.003.001.002.004.00-1.003.002.001.002.003.001.002.001.00-1.002.002.001.00-1.00-2.002.001.002.00-2.00-1.001.00-2.001.001.002.002.00-2.001.00-1.002.001.001.00-1.001.001.001.00--1.001.001.00-1.00--1.00-1.001.00----1.001.001.001.00---1.00-1.00--1.001.00-1.001.00---1.00-
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAG...................................................................................211253.00253.0027.0021.005.0023.008.0010.006.003.001.009.003.006.004.00--4.008.003.003.008.003.003.003.002.002.00--2.00-1.001.001.007.003.001.0017.00-1.00--1.00-1.001.002.003.002.00--1.002.002.008.002.00----1.00--1.00---2.00------1.001.00-1.001.00--2.001.00--1.00-2.00--1.001.00--1.001.00--------1.00-1.002.00-1.00-------2.00----1.00----------------1.00----1.00--------------------------------1.00
..................................................................................................................................................ACCGGGGACTGCGGCTTTCA....................................................................................201147.00147.006.0010.001.0012.0011.004.006.0010.005.001.003.004.005.0013.00-3.002.002.006.00-7.001.00--2.00--1.00-4.00----1.00--1.00--------1.00--1.00-2.00-1.00-3.00-----2.002.00----------1.00---1.00---2.00----1.00-1.00--1.00---1.00-----1.00----3.00----------1.00----------------------------------1.00-----------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTC.....................................................................................19197.0097.00-1.002.004.0012.00-2.004.005.00---9.006.0021.001.002.006.00--1.00------6.00---------1.00-6.00---------------------1.00---------1.00--4.00----1.00----------------------1.00-------------------------------------------------------------------------
...................................................................................................................................................CCGGGGACTGCGGCTTTCAGT..................................................................................21194.0094.008.0015.004.002.00-2.006.001.006.005.001.00----3.001.00-----1.001.00-3.001.00-3.00--1.00----2.00----1.00-2.001.001.00-1.00-1.001.00--1.00------1.00-------1.001.00--1.00--------1.00-2.00----1.00-------1.00--1.001.00---------------------------1.00---1.00-----------1.00--1.00-----1.00----------1.001.00------1.00---
..................................................................................................................................................ACCGGGGACTGCGGCTTT......................................................................................18186.0086.004.007.00-8.003.006.001.002.00-1.002.00-2.009.0012.00-3.004.002.00--2.001.001.00-----2.00---------2.00---------1.00---1.00-------2.00--------1.00---1.002.001.00--------------1.00-----------------------------------------------------1.00-------------------------1.00----
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGTT.................................................................................23154.0054.0022.003.00-3.00--6.00--1.003.00-------3.001.00-1.00-1.00------1.00---1.00--1.00---1.00----1.00--1.00--------1.00-----------1.00---------1.00-------------1.00---------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGTA.................................................................................23132.001187.003.00--2.00-1.00-1.00--2.001.00---1.001.00----2.00--2.00--1.00-1.00------1.001.00------1.001.00-3.00------------------2.00--------1.00-------1.00-----------------2.00------------------------------------------------------------------1.00-------
..................................................................................................................................................ACCGGGGACTGCGGCTTTT.....................................................................................19125.0086.001.001.00---1.00------9.002.002.00-1.00--1.00---------1.00-------------------------------------1.00--2.00---1.00-------1.00-------------------------------------------1.00-------------------------------------------------
...................................................................................................................................................CCGGGGACTGCGGCTTTCAG...................................................................................20123.0023.00-3.001.001.004.002.001.001.001.00----1.00-1.00-1.00-----------1.00----1.00----1.00-----------------2.00------------1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTA.....................................................................................19122.0086.00-1.00--1.00-2.001.00--1.00-2.003.001.00--5.001.00--------1.00-------------------------1.00--------1.00-----------------------------1.00-----------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGA..................................................................................22122.00253.002.001.00-1.00--1.00--1.00-----1.00--1.00---1.001.001.001.00-2.00-1.00------4.001.00---------------------------1.00----------------------------1.00---------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCT....................................................................................20121.0097.00-2.00------3.001.00--3.00----7.00------------1.00------1.00------------------1.00-----------1.00-------------------------------------------------1.00---------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGTTT................................................................................24120.0054.007.001.001.00------2.00--------1.002.00-3.001.001.00-------------------------1.00------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGG..................................................................................22117.00253.00-3.003.00-1.00-1.00-1.00--1.00---1.00------2.00--1.00----1.00-----------------------1.00------------------------1.00------------------------------------------------------------------------------------------------
...................................................................................................................................................CCGGGGACTGCGGCTTTCAGA..................................................................................21116.0023.00----3.00-------2.00----2.00--------9.00-----------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAT...................................................................................21112.00147.002.00--1.00-------5.00-------1.00----------1.00------1.00-------1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGTAT................................................................................24110.001187.003.00--1.00--1.00------------1.00--------------------1.00--------------1.00---------------------------------1.00--------------------1.00-----------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCCGT..................................................................................22110.0097.001.00------1.002.00--1.00------------1.00-----1.00-------------1.00-----------------------------------------------------1.00-------------------------1.00---------------------------------------------------
..................................................................................................................................................................................TGTTTGCTGTTTGTCCTCCCAGA.................................................23110.001.00--2.00--------3.00-------------3.00-----1.00-------------------------------------------------------------------------------------------------------------------------------1.00----------------
.................................................................................................................................................CACCGGGGACTGCGGCTTTCAGT..................................................................................23110.0010.001.00-3.00---1.00----------------1.00---------------------------------------1.00--------------------------------------------3.00-------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTAA....................................................................................20110.0086.001.00-----1.00---1.00--------1.00------------------------------------------1.00------1.00-----------1.001.00----1.00----------1.00-----------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCATT..................................................................................22110.00147.00--1.002.00--1.00---------------2.00-1.00-----2.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CCGGGGACTGCGGCTTTCA....................................................................................1919.009.001.00---1.00-1.00------1.00-1.00--------------------1.001.00------------1.00----------------------------------------1.00------------------------------------------------------------------------------------
..................................................................................................................................................................................TGTTTGCTGTTTGTCCTCCCAGT.................................................2318.001.00-------------------------------------------2.00-1.00---1.00----------1.00-------1.00--1.00------------------------------------------------------------------------------------------1.00-------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGTAA................................................................................2418.001187.001.001.00----------------1.00----2.001.00---------1.00---------------------------------------------------------1.00-----------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTTT....................................................................................2017.0086.00-1.00----1.001.00----------1.00----------1.00--------------------------------1.00-----1.00-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGC..................................................................................2216.00253.00----2.00-1.001.00-1.00------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CCGGGGACTGCGGCTTTCAGTA.................................................................................2215.0094.00-2.00-----1.00--------------1.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGTTTGCTGTTTGTCCTCCCAT..................................................2214.001.00----------------------------------------------------------------2.00---1.00--1.00--------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCTGT..................................................................................2214.0097.00--1.00----1.001.00--------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGAA.................................................................................2314.00253.00-------1.00-------1.00--------1.00------------------------------------------------------------------------------1.00------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTAAGT..................................................................................2214.0086.003.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTT.......................................................................................1714.004.00-------2.001.00----1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAA...................................................................................2113.00147.00-------1.00-------------------2.00----------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CCGGGGACTGCGGCTTTCAGTT.................................................................................2213.003.001.001.00-----------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTAT....................................................................................2013.0086.00-------1.00--1.00----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTCC.....................................................................................1913.004.00-----------------1.00---------------------2.00----------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCG....................................................................................2012.0097.00---1.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGTTAA...............................................................................2512.002.00------------------------------------------------------------------------------------------------------------------------------------------------------1.001.00------------------------
.............GATGGGGGTACAGTCTCGGAGAGGACATGTGG.............................................................................................................................................................................................................3212.002.00-------------------------------------------------------------------------------------------------------------------------------2.00------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTAT.....................................................................................1912.004.00---1.00----------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTGAGT..................................................................................2212.0086.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GGGGACTGCGGCTTTCAGT..................................................................................1912.002.00----------------------------------------------1.00------------------------------------------------------------1.00--------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCCTTC.....................................................................................192.000.00-----------------1.00---------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTTAA...................................................................................2112.0086.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCCTT......................................................................................182.000.00-------------1.00-------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CAAACCACCGGGGACTGCGGCTTTCAGTT.................................................................................2912.002.00----------------------------------------------------------------------------------2.00---------------------------------------------------------------------------------------------
....................................................................................................................................................CGGGGACTGCGGCTTTCAGT..................................................................................2012.002.001.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGAAA................................................................................2412.00253.00----------------1.00------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTTA....................................................................................2012.0086.00------------1.00------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGTTTGCTGTTTGTCCTCCCAGTT................................................2412.001.00--2.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCCTT..................................................................................2212.0097.00------------------------1.00---------------------------------------------------------------------------------------------------1.00---------------------------------------------------
...................................................................................................................................................CCGGGGACTGCGGCTTTCAGG..................................................................................2112.0023.001.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGTTTGCTGTTTGTCCTC......................................................1811.001.00----------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------
........................................................................................................................................................................................................................CATCTCCTCAGGGCTAGGG...............1911.001.00-------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------
.................................................................................................................................................CACCGGGGACTGCGGCTTTCA....................................................................................2111.001.00---------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
......................................................................................................................................................GGGACTGCGGCTTTCCTG..................................................................................181.000.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CCGGGGACTGCGGCTTTCAGC..................................................................................2111.0023.00------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CGGGGACTGCGGCTTTTAGT..................................................................................201.000.00--------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------
..AACTGAATGAAGATGGGGG.....................................................................................................................................................................................................................................1911.001.00-------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................CCTAGCCTGTCTGTTTCAG...............................................................................................................................................................191.000.00------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGAAAT...............................................................................2511.00253.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGTATT...............................................................................2511.001187.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGTTA................................................................................2411.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CCGGGGACTGCGGCTTTAAG...................................................................................201.000.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGTTAGT..............................................................................2611.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTTAGT..................................................................................2211.0086.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTTTT...................................................................................2111.0086.00---------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAAAA.................................................................................2311.00147.00------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................CACCGGGGACTGCGGCTTTCAGTAAA...............................................................................2611.0010.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTCT.....................................................................................1911.004.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTATA...................................................................................2111.0086.00-------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTC......................................................................................1811.004.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTG.....................................................................................1911.0086.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTGC....................................................................................2011.0086.00---------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TCTCCTCAGGGCTAGGGGAG............2011.001.00----------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CCGGGGACTGCGGCTTTCATT..................................................................................2111.009.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CCGGGGACTGCGGCTTTAAGT..................................................................................211.000.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTTAG...................................................................................2111.0086.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCACT..................................................................................2211.00147.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................CACCGGGGACTGCGGGC........................................................................................171.000.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTCAG....................................................................................2011.004.00----------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGTTTGCTGTTTGTCCTCCCAG..................................................2211.001.00---------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------
................................................................................GTCTGTTCAGTGACAGATC.......................................................................................................................................................1911.001.00----------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAC...................................................................................2111.00147.00---------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CCGGGGACTGCGGCTTTCAGTAA................................................................................2311.0094.00-----------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGTTTGCTGTTTGTCCTCCCATT.................................................2311.001.00-------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CGGGGACTGCGGCTTTCAGTT.................................................................................2111.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GAGCTGATGGAGTTGAGGCTGT.................................................................................................................2211.001.00------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCGA...................................................................................2111.0097.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGTTTGCTGTTTGTCCTCCCATTAT...............................................2511.001.00--------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGTGA................................................................................2411.001187.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGTTTGCTGTTTGTCCTCCCAAAA................................................2411.001.00---------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
....CTGAATGAAGATGGGGGTA...................................................................................................................................................................................................................................1911.001.00-------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTCAGT...................................................................................2111.004.00---------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCCT...................................................................................2111.0097.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTAAG...................................................................................2111.0086.00----------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTCGAG...................................................................................2111.004.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCCGTT.................................................................................2311.0097.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CCGGGGACTGCGGCTTTCAA...................................................................................2011.009.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................CACCGGGGACTGCGGCTTTAA....................................................................................211.000.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................GCTGAGCTGATGGAGTTGAG......................................................................................................................2011.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------
.................................................................................................................................................CACCGGGGACTGCGGCTTTCAGTA.................................................................................2411.0010.00-------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................TTTGGCCAGCATCTCCTCAGGGCTAGGGGAGGTCAC.......3611.001.00-------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTGT.....................................................................................1911.004.00-----------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCCG...................................................................................2111.0097.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTAGT...................................................................................2111.0086.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................CACCGGGGACTGCGGCTTTAT....................................................................................211.000.00----------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------
..............................................................................................................CTGCTGAGCTGATGGTAC..........................................................................................................................181.000.00------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GGGGACTGCGGCTTTTTT...................................................................................181.000.00-------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCC....................................................................................2011.0097.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCTAT..................................................................................2211.0097.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................TGTGGAGGAGGGTGTATAA...............................................................................................................................................................................................191.000.00--------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTCTCT....................................................................................201.000.00-----------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................CACCGGGGACTGCGGCTTTCAGTT.................................................................................2411.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTCAGT....................................................................................201.000.00---------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAAT..................................................................................2211.00147.00------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................ACCACCGGGGACTGCCCT.........................................................................................181.000.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGTTTGCTGTTTGTCCTCCCA...................................................2111.001.00--------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGTTAT...............................................................................2511.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTAC.....................................................................................1911.004.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTCAGGA.................................................................................2311.00253.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTGCAG...................................................................................2111.004.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTAG....................................................................................2011.0086.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................CACCGGGGACTGCGGCTTTCAG...................................................................................2211.001.00--------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTAA.....................................................................................1911.004.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTTTG...................................................................................2111.0086.00-------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................GTTGAGGCTGTAAACAAACCACCGGGGACTGCGGCTTTCAGTTAAAGGTCACTGTTTGCTGTTTGTCCTCCCAG..................................................7411.001.00-----------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
...................................................................................................................................................CCGGGGACTGCGGCTTTCAGTAT................................................................................2311.0094.00------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................ATGGAGTTGAGGCTGTAAACAAACCACCGGGGACTGCGGCTTTCAGTTAAAGGTCACTGTTTGCTGTTTGTCCTCCCAG..................................................7911.001.00-----------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
..................................................................................................................................................ACCGGGGACTGCGGCTTTGAG...................................................................................2111.0086.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................CCTCAGGGCTAGGGGAGGTCACCT.....2411.001.00-----------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------
.....TGAATGAAGATGGGG......................................................................................................................................................................................................................................15100.700.70--------------------------------0.70-----------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GGGGACTGCGGCTT.......................................................................................1490.110.11---------------------------------------0.11----------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
TTAACTGAATGAAGATGGGGGTACAGTCTCGGAGAGGACATGTGGAGGAGGGTGTGGCTTTTCAGATGAGACCCTAGCCTGTCTGTTCAGTGACAGATCTGTTCTTAGCCCTGCTGAGCTGATGGAGTTGAGGCTGTAAACAAACCACCGGGGACTGCGGCTTTCAGTTAAAGGTCACTGTTTGCTGTTTGTCCTCCCAGGAGTGGTTTTGGCCAGCATCTCCTCAGGGCTAGGGGAGGTCACCTTCCTC
.....................................................................................................................................................((((((.(((((...((((........))))...)))))..))))))......................................................
.............................................................................................................................................142.......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		mjLiverWT2()
Liver Data. (liver)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjLiverWT1()
Liver Data. (liver)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		mjTestesWT4()
Testes Data. (testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR553585(SRX182791)
source: Kidney. (Kidney)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR553582(SRX182788)
source: Brain. (Brain)		mjTestesWT1()
Testes Data. (testes)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR525242(SRA056111/SRX170318)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR060845(GSM561991)
total RNA. (brain)		SRR525243(SRA056111/SRX170319)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		mjTestesWT3()
Testes Data. (testes)		mjTestesWT2()
Testes Data. (testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR525241(SRA056111/SRX170317)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR206940(GSM723281)
other. (brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)		mjLiverWT3()
Liver Data. (liver)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR095853(SRX039174)
sequencing of miRNA from wild type and diseas. (heart)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)		SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR206941(GSM723282)
other. (brain)		SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		GSM510444(GSM510444)
brain_rep5. (brain)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR038744(GSM527279)
small RNA-Seq. (brain)		GSM475281(GSM475281)
total RNA. (testes)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR525239(SRA056111/SRX170315)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR037898(GSM510434)
ovary_rep3. (ovary)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR206939(GSM723280)
other. (brain)		SRR346415(SRX098256)
source: Testis. (Testes)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR023848(GSM307157)
mEFsmallrna_rep1. (cell line)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR037937(GSM510475)
293cand2. (cell line)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
.......................................................................................CAGTGACAGATCTGTTTGC................................................................................................................................................ 191.000.00-----------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................GATCTGTTCTTAGCCCTG......................................................................................................................................... 1811.001.00------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.........................................................................CTAGCCTGTCTGTTCAGTGA............................................................................................................................................................. 2011.001.00------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................CCTGCTGAGCTGATGGAAAC......................................................................................................................... 201.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................CAGATCTGTTCTTAGCCCT.......................................................................................................................................... 1911.001.00------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.............................................................................................CAGATCTGTTCTTAGCCC........................................................................................................................................... 1811.001.00------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................GTCACTGTTTGCTGTTGG........................................................... 181.000.00---------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................TTAGCCCTGCTGAGCTCTTT.............................................................................................................................. 201.000.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00--
........................................................................................................................................................................TAAAGGTCACTGTTTCTGA............................................................... 191.000.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GGTGTGGCTTTTCAGATGAGAC.................................................................................................................................................................................. 2211.001.00------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------