ID: mmu-mir-7034
GENE: Tmem120a(11)
chr5:136211626-136211816-


(1)
AGO.mut
(1)
AGO1.ip
(11)
AGO2.ip
(4)
B-CELL
(19)
BRAIN
(3)
CELL-LINE
(2)
DCR.mut
(2)
DGCR8.mut
(4)
EMBRYO
(8)
ESC
(6)
FIBROBLAST
(1)
HEART
(1)
KIDNEY
(8)
LIVER
(2)
LUNG
(4)
LYMPH
(18)
OTHER
(6)
OTHER.mut
(1)
OVARY
(1)
PANCREAS
(3)
PIWI.ip
(1)
PIWI.mut
(2)
SKIN
(8)
SPLEEN
(15)
TESTES
(1)
THYMUS
(2)
UTERUS

Sense strand
CGCTGACATTGTTTAACTTGGCCCGGGACCCGGAGTGCAAGGAGTGGCAGGTGAGCCAGGGGTCCGGGAGGGATGGATGTGCTGGAGGTCCCATCTAGACCTTGACTGTCCTGACCTTGGCCTTCCTTCCCTACCCTACAGGTGCTCATGTGCGGCTTCCCCTTCCTCCTCCTCTTCCTCGGCAATTTCTT
..........................................................(((((..((((((((.((........((((((.......))))))......((.......)))).)))))))).)))))......................................................
.........................................................58.................................................................................141................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
mjLiverKO2()
Liver Data. (Zcchc11 liver)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR553582(SRX182788)
source: Brain. (Brain)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
mjLiverWT3()
Liver Data. (liver)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
mjTestesWT4()
Testes Data. (testes)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR060845(GSM561991)
total RNA. (brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR059771(GSM562833)
CD4_control. (spleen)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
GSM640577(GSM640577)
small RNA in the liver with paternal control . (liver)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR095853(SRX039174)
sequencing of miRNA from wild type and diseas. (heart)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR206942(GSM723283)
other. (brain)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)
SRR525239(SRA056111/SRX170315)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)
GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
..............................................................TCCGGGAGGGATGGATGTGCTGG..........................................................................................................23127.0027.007.00--1.00-2.00-3.00-1.00-3.001.002.00----------3.00----------1.00-----------------------------1.00-------------------1.00---------1.00------------
..............................................................TCCGGGAGGGATGGATGTGCT............................................................................................................21123.0023.001.00-9.00---5.00-------------------2.00---------1.00-------------1.00-----1.00---------1.00---------1.00-----------------------1.00-------
..............................................................TCCGGGAGGGATGGATGTGCTGGAGG.......................................................................................................26121.0021.003.00---13.00----2.00----------------------------------1.00---1.00--------------------1.00--------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGGA.........................................................................................................24119.0019.004.00--1.00-1.00-2.00--------1.001.00---------------------1.00-1.001.00-----------------1.00-1.00--------------1.00-1.00--------1.00---------1.00---------
....................................................................................................................TTGGCCTTCCTTCCCTACCCTATA...................................................2416.000.00-16.00----------------------------------------------------------------------------------------------------------
...............................................................CCGGGAGGGATGGATGTGCTGGAGG.......................................................................................................25112.0012.00-10.00-------1.00------------------------------------------1.00-------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTG...........................................................................................................22111.0011.001.00-1.00--1.00-1.00-----1.00-----------1.00--1.00--2.00--------------1.00--------------------1.00----------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGGAG........................................................................................................25110.0010.00--------4.001.00--2.001.00----------------1.00----------------------------------------------------------1.00------------------
..............................................................TCCGGGAGGGATGGATGTGC.............................................................................................................2018.008.001.00-2.00---1.00----1.00-------------------------1.00-----------1.00----------------------1.00-----------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGGAGT.......................................................................................................2618.0010.003.00----2.00--------------------------------1.00----------------------------------------------------1.00---------1.00------
....................................................................................................................TTGGCCTTCCTTCCCTACCCTACA...................................................2418.008.001.00-----1.00----------------1.00-----------------1.00-------------------1.00-1.00----1.00---------------------------1.00-----------
....................................................................................................................TTGGCCTTCCTTCCCTACCCTAC....................................................2315.005.001.00-1.00--------------------2.00---1.00--------------------------------------------------------------------------------
..................................................GTGAGCCAGGGGTCCGGGAGGGATGGATGTGCTGGAGGTCCCATCTAGACCTTGACTGTCCTGACCTTGGCCTTCCTTCCCTACCCTACAG..................................................9115.005.00----------5.00-------------------------------------------------------------------------------------------------
.............................................................................................TCTAGACCTTGACTGTCCTGACC...........................................................................2315.005.00------------1.00------3.00-------1.00--------------------------------------------------------------------------------
...............................................................CCGGGAGGGATGGATGTGCT............................................................................................................2015.005.00--1.00------------1.00--------------------------------------1.00----------------1.00---1.00--------------------------------
..............................................................TCCGGGAGGGATGGATGTG..............................................................................................................1914.004.00---------------1.00--3.00-----------------------------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGT..........................................................................................................2314.0011.00---1.00-1.00-1.00------------------------------1.00---------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGGAA........................................................................................................2513.0019.00-----2.00---------------------------------1.00--------------------------------------------------------------------
.............................................................................................TCTAGACCTTGACTGTCCTGA.............................................................................2113.003.001.00--------------------1.00-----------------------------------------------------------------1.00--------------------
...............................................................CCGGGAGGGATGGATGTGCTGGAG........................................................................................................2413.003.001.00--2.00--------------------------------------------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGA..........................................................................................................2313.0011.002.00-------------------------------------------------------------------------1.00---------------------------------
.......................................................................GATGGATGTGCTGGAGG.......................................................................................................1713.003.00--------3.00---------------------------------------------------------------------------------------------------
...............................................................CCGGGAGGGATGGATGTGCTGGAAT.......................................................................................................2512.002.001.00----------------------------1.00------------------------------------------------------------------------------
.............TAACTTGGCCCGGGACCCGGAGTTCA........................................................................................................................................................262.000.00--------------------2.00---------------------------------------------------------------------------------------
...............................................................CCGGGAGGGATGGATGTGCTGG..........................................................................................................2212.002.001.00-----------------------------------------------------------------------------------1.00-----------------------
...............................................................CCGGGAGGGATGGATGTGCTGGA.........................................................................................................2312.002.00---------------------------------1.00------------------------------------1.00-------------------------------------
...............................................................CCGGGAGGGATGGATGTGCTGT..........................................................................................................2212.001.00---2.00--------------------------------------------------------------------------------------------------------
....................................................................................................................................................TGTGCGGCTTCCCCTTCCTCCTC....................2312.002.00--------------2.00---------------------------------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGGAT........................................................................................................2512.0019.00--------------------------------1.00-------1.00-------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGGAAA.......................................................................................................2612.0019.00--1.00--1.00------------------------------------------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGGAGA.......................................................................................................2612.0010.002.00-----------------------------------------------------------------------------------------------------------
................................................................CGGGAGGGATGGATGTGCTGGAG........................................................................................................2312.002.001.00------------------------------------------------------------------------------------------------1.00----------
..................................................GTGAGCCAGGGGTCCGGGAGGGATG....................................................................................................................2512.002.00----------------2.00-------------------------------------------------------------------------------------------
...............................................................CCGGGAGGGATGGATGTG..............................................................................................................1811.001.00-------------------------------------1.00----------------------------------------------------------------------
........................................................................................TCCCATCTAGACCTTGACTGTCCTGACC...........................................................................2811.001.00-------1.00----------------------------------------------------------------------------------------------------
................................................................CGGGAGGGATGGATGTGCTGGAGA.......................................................................................................2411.002.00---------------------------------------------------------------------------------------------1.00--------------
....................................................................................................................................................TGTGCGGCTTCCCCTTCCTCCTCCTC.................2611.001.00----------------------------------1.00-------------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGTAAG.......................................................................................................2611.0011.00---1.00--------------------------------------------------------------------------------------------------------
...............................................................CCGGGAGGGATGGATGTGC.............................................................................................................1911.001.00---------------1.00--------------------------------------------------------------------------------------------
.............................................GGCAGGTGAGCCAGGATCT...............................................................................................................................191.000.00------------------------------------------------------------------------------------------1.00-----------------
..............................................................TCCGGGAGGGATGGAGAG...............................................................................................................181.000.00-----------------------------------------------------------1.00------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGGAGGT......................................................................................................2711.001.00---1.00--------------------------------------------------------------------------------------------------------
................................................................CGGGAGGGATGGATGTGCTGGT.........................................................................................................221.000.00-----------------------------1.00------------------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGGTAA.......................................................................................................2611.0027.00---------------------------------------------------1.00--------------------------------------------------------
.................................................................GGGAGGGATGGATGTGCTGGAGG.......................................................................................................2311.001.00----------------------------------------------------------------1.00-------------------------------------------
...............................................................CCGGGAGGGATGGATGTGCTGGAGGTAAG...................................................................................................2911.001.001.00-----------------------------------------------------------------------------------------------------------
............................CCCGGAGTGCAAGGAGTGGCAG.............................................................................................................................................2211.001.001.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................TTGGCCTTCCTTCCCTACCCT......................................................2111.001.001.00-----------------------------------------------------------------------------------------------------------
................................................................CGGGAGGGATGGATGTGCT............................................................................................................1911.001.00------1.00-----------------------------------------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTTT..........................................................................................................2311.0023.00-------------------------1.00----------------------------------------------------------------------------------
............TTAACTTGGCCCGGGACCCGGAGTG..........................................................................................................................................................2511.001.00--------------------1.00---------------------------------------------------------------------------------------
...............................................................CCGGGAGGGATGGATGTGCTGA..........................................................................................................2211.001.00-----------------1.00------------------------------------------------------------------------------------------
..........................GACCCGGAGTGCAAGGAGTGGCAGG............................................................................................................................................2511.001.00-----------------------------------------------------------------------------------1.00------------------------
..................................................................................................................................................CATGTGCGGCTTCCCC.............................1611.001.00--------------1.00---------------------------------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGGAAT.......................................................................................................2611.0019.00---1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................TTGACTGTCCTGACCTTGGCCTTATAA...............................................................271.000.00------1.00-----------------------------------------------------------------------------------------------------
...............................................................CCGGGAGGGATGGATGTGCTGGAGT.......................................................................................................2511.003.00------------------------------1.00-----------------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGAG.........................................................................................................2411.0011.00-----------1.00------------------------------------------------------------------------------------------------
...............................................................CCGGGAGGGATGGATGTGCTGGAGGT......................................................................................................2611.001.00---------1.00--------------------------------------------------------------------------------------------------
...TGACATTGTTTAACTTGGCCCGGGACC.................................................................................................................................................................2711.001.00----------------------------------1.00-------------------------------------------------------------------------
...................................................................GAGGGATGGATGTGCTGGAG........................................................................................................2011.001.00---1.00--------------------------------------------------------------------------------------------------------
...............................................................CCGGGAGGGATGGATGTGCTAT..........................................................................................................2211.005.001.00-----------------------------------------------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCAT...........................................................................................................2211.008.00--------------------------------1.00---------------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGATG........................................................................................................2511.0011.00---------------------1.00--------------------------------------------------------------------------------------
....................................................................................................................TTGGCCTTCCTTCCCTACCCTAT....................................................231.000.00---------------------------------1.00--------------------------------------------------------------------------
...............................................................................................TAGACCTTGACTGTCCTGACCTTGT.......................................................................251.000.00--------------------------------------------------------------------------------1.00---------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGAAT........................................................................................................2511.0011.001.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................TTGGCCTTCCTTCCCTACCCTCTA...................................................2411.001.00-1.00----------------------------------------------------------------------------------------------------------
...............................................................CCGGGAGGGATGGATGTGCTGGAA........................................................................................................2411.002.00-------1.00----------------------------------------------------------------------------------------------------
...............................................................CCGGGAGGGATGGATGTGCTA...........................................................................................................2111.005.00----------------------------------------------------------------------------------------------1.00-------------
...................................................................................................................CTTGGCCTTCCTTCCCTACCCTAC....................................................2411.001.00-------------------------------------------------------------------------1.00----------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGGT.........................................................................................................2411.0027.00--------------------------------------------------------------------------------------1.00---------------------
.................................................................GGGAGGGATGGATGTGCTGGAG........................................................................................................2211.001.00-------------------------------------------------------1.00----------------------------------------------------
........................GGGACCCGGAGTGCAAG......................................................................................................................................................1711.001.00-----------------1.00------------------------------------------------------------------------------------------
.........................GGACCCGGAGTGCAAGGAGT..................................................................................................................................................2011.001.00----------------------------------------------------------------------------------1.00-------------------------
........................................................................................................................................TACAGGTGCTCATGTGCGGCTTCCCCTT...........................2811.001.00---------------------------------------------------------------------------------1.00--------------------------
................................................................CGGGAGGGATGGATGTGCTGGAT........................................................................................................231.000.00-----------------------------------------------------1.00------------------------------------------------------
.....................................................................................................TTGACTGTCCTGACCTTGGCC.....................................................................2111.001.001.00-----------------------------------------------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTGGAACA......................................................................................................2711.0019.001.00-----------------------------------------------------------------------------------------------------------
................................................................CGGGAGGGATGGATGTGCTGGAGT.......................................................................................................2411.002.00---------------------1.00--------------------------------------------------------------------------------------
...............................................................CCGGGAGGGATGGATGTGCTG...........................................................................................................2111.001.00---1.00--------------------------------------------------------------------------------------------------------
................................................................CGGGAGGGATGGATGTGCTGGAGG.......................................................................................................2411.001.00---1.00--------------------------------------------------------------------------------------------------------
..............................................................TCCGGGAGGGATGGATGTGCTTA..........................................................................................................2311.0023.00--1.00---------------------------------------------------------------------------------------------------------
....................................................................................................................TTGGCCTTCCTTCCCTACCCTAA....................................................231.000.00----------------------------1.00-------------------------------------------------------------------------------
..............................................................................................................CTGACCTTGGCCTTCCTT...............................................................1820.500.50------------------------------------------------------------------------------------------------------0.50-----
.....................................................................................................................................................................CTCCTCCTCTTCCTCGGC........1840.250.25--------------------------------------------------------------------------------------------------------0.25---
........................................................................ATGGATGTGCTGGAG........................................................................................................1550.200.20-----------------------------------------------------------------------------------------------------------0.20
........................................................................ATGGATGTGCTGGAGCGTC....................................................................................................1950.200.20----------------------------------------------------------------------------------------------------------0.20-
........................................................................ATGGATGTGCTGGAGT.......................................................................................................1650.200.20--------------------------------------------0.20---------------------------------------------------------------
........................................................................ATGGATGTGCTGGAGCG......................................................................................................1750.200.20--------------------------------------------0.20---------------------------------------------------------------
................................................................CGGGAGGGATGGAT.................................................................................................................1480.120.12---------------------------------------------0.12--------------------------------------------------------------

Antisense strand
CGCTGACATTGTTTAACTTGGCCCGGGACCCGGAGTGCAAGGAGTGGCAGGTGAGCCAGGGGTCCGGGAGGGATGGATGTGCTGGAGGTCCCATCTAGACCTTGACTGTCCTGACCTTGGCCTTCCTTCCCTACCCTACAGGTGCTCATGTGCGGCTTCCCCTTCCTCCTCCTCTTCCTCGGCAATTTCTT
..........................................................(((((..((((((((.((........((((((.......))))))......((.......)))).)))))))).)))))......................................................
.........................................................58.................................................................................141................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
mjLiverKO2()
Liver Data. (Zcchc11 liver)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR553582(SRX182788)
source: Brain. (Brain)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
mjLiverWT3()
Liver Data. (liver)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
mjTestesWT4()
Testes Data. (testes)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR060845(GSM561991)
total RNA. (brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR059771(GSM562833)
CD4_control. (spleen)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
GSM640577(GSM640577)
small RNA in the liver with paternal control . (liver)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR095853(SRX039174)
sequencing of miRNA from wild type and diseas. (heart)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR206942(GSM723283)
other. (brain)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)
SRR525239(SRA056111/SRX170315)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)
GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
........................................................................................TCCCATCTAGACCTTGACT.................................................................................... 1913.003.00----------------------3.00-------------------------------------------------------------------------------------
..............................................................................................................................................................CCCCTTCCTCCTCCTCTTCCCT........... 222.000.00--1.00-------------------------------------1.00-------------------------------------------------------------------
..............................................................................................................................................................CCCCTTCCTCCTCCTCTTAT............. 202.000.00-------------------------------------------2.00----------------------------------------------------------------
..............................................................................................................................................................CCCCTTCCTCCTCCTCTTCCC............ 212.000.00--1.00------------------------------------------------------1.00--------------------------------------------------
.........................................................................................................................................................................TCCTCTTCCTCGGCAA...... 1611.001.00------------------------------------------------------------------------------1.00-----------------------------
.....................................................................................................................................CCCTACAGGTGCTCATG......................................... 1711.001.00---------------------------------------------------------------------------------------------------1.00--------
................................................................................................................GACCTTGGCCTTCCTTAGT............................................................ 191.000.00---------------------------------------------1.00--------------------------------------------------------------
.................................................................................................................................................................CTTCCTCCTCCTCTTCCTTTC......... 211.000.00-----------------------------------------------1.00------------------------------------------------------------
..............................................................................................................................................................CCCCTTCCTCCTCCTCTTCCCTCA......... 241.000.00-----------------------------------1.00------------------------------------------------------------------------
..................................................................................................................CCTTGGCCTTCCTTCCCTACCCTACAGG................................................. 2811.001.00---1.00--------------------------------------------------------------------------------------------------------
...............................................................................TGCTGGAGGTCCCATAT............................................................................................... 171.000.00----------------------------------------------------------1.00-------------------------------------------------
..............................................................................................................................................................CCCCTTCCTCCTCCTCTTCCTCC.......... 231.000.00------------------------------------1.00-----------------------------------------------------------------------
...........................................................................................................GTCCTGACCTTGGCCTTCCTT............................................................... 2111.001.00------------------------------------------1.00-----------------------------------------------------------------
..................................................................................TGGAGGTCCCATCTAG............................................................................................. 1620.500.50--------------0.50---------------------------------------------------------------------------------------------
.........................................................................................................CTGTCCTGACCTTGGCCT.................................................................... 1830.330.33-------------------------------------------------------------------------------------------------------0.33----
.............................................................................................................................CTTCCCTACCCTACA................................................... 1550.200.20---------------------------------------------------------------------------------------------------------0.20--