ID: mmu-mir-7029
GENE: Gcn1l1(10)
chr5:116030539-116031061+


(1)
AGO.mut
(1)
AGO1.ip
(12)
AGO2.ip
(1)
AGO3.ip
(5)
B-CELL
(27)
BRAIN
(2)
CELL-LINE
(1)
DCR.mut
(1)
DGCR8.mut
(12)
EMBRYO
(8)
ESC
(5)
FIBROBLAST
(1)
HEART
(3)
KIDNEY
(8)
LIVER
(1)
LUNG
(4)
LYMPH
(15)
OTHER
(11)
OTHER.mut
(1)
PANCREAS
(6)
PIWI.ip
(1)
PIWI.mut
(3)
SKIN
(7)
SPLEEN
(28)
TESTES
(3)
THYMUS
(1)
TOTAL-RNA
(2)
UTERUS

Sense strand
GACACTCGATCTCAGCCAGTACGCCCTGGACATCGTGAAAGGCTTGGCAAGTGAGTGTGCTGCCCACTCTGGACAAGCAGACCTCTGCAGCCCCTGATGCTCCTGGCAGTTCCTGTTGTATCTGACAGCTTTTTGTTGAAAAGGGGTGGGGAACAGCTCCTTGGGTTAAAAAGGTGGTTTCTGCCAAGCATGCAAACTCCAGTGTAATCCTGGAAACCCCGTGATGAAAGGAGAGAGCCCGCTCCCACAGTTTGTTCTCTGCCCTGTACTGTGTGCCATGGCAGCCCCTCCCCCAGACAGAGTAAATAAATGTTAAATAAATGAAAAGGAAAAGGCTTTTACTCCCTTCAAGGGGAGGAGGTCCTTTCCCGAGGTGGTTGATAGTTGAGGTCAGAGAGCCGGGACCCCTGGGAAGAGAGGTAAGTCTGGACGCTCGGCTGCCAGCGCCCTGAGCTGTGGCTCTGTGTGTCCAGATCAGCTGAAGTCCAACAGCCCCCGCCTGATGGATGAAGCGGTCCTGGCG
...................................................................................................................................................................................................................................................................................................................................................................................................................................((..((((((((((.(((..((((..((.....))..)))).))).))))))))))..))............................................
...................................................................................................................................................................................................................................................................................................................................................................................................................................420.........................................................480.........................................
SizePerfect hitTotal NormPerfect NormmjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
mjTestesWT4()
Testes Data. (testes)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR206940(GSM723281)
other. (brain)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
mjTestesWT3()
Testes Data. (testes)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
mjLiverWT1()
Liver Data. (liver)
mjTestesWT2()
Testes Data. (testes)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
mjLiverWT3()
Liver Data. (liver)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR073955(GSM629281)
total RNA. (blood)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR037906(GSM510442)
brain_rep3. (brain)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR095855BC10(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR037909(GSM510446)
newborn_rep2. (total RNA)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)
SRR037928(GSM510466)
e7p5_rep2. (embryo)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR206941(GSM723282)
other. (brain)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
SRR037930(GSM510468)
e7p5_rep4. (embryo)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR059767(GSM562829)
DN3_Dicer. (thymus)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCAGCGC............................................................................23138.0038.004.005.00-4.002.00---1.001.00-3.00-1.00---2.001.00-1.00--1.00-------1.00-1.001.00-------------------2.00----1.00-----------------------1.001.001.00--1.00------------1.00------------------------1.00---------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGATC...............................................22116.0016.002.002.001.002.00---------1.00------------1.00------1.00-----1.002.00-------1.00--------------------------------------------------1.00-------------1.00----------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTCTGGACGCTCGGCTGCCA................................................................................23115.0015.00-----1.00-1.00-1.00---------1.00-1.002.00-1.00------------2.00----1.00---1.00--------1.00---------------------------------1.00----------1.00-----------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCAGC..............................................................................21112.0012.00--1.001.00------6.00-1.00---1.00--------1.00------1.00-------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGATA...............................................2219.004.008.00-------------------------------------------------------------------1.00-------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGATCT..............................................2319.0016.007.00------1.00-----------------------------------------------------1.00--------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTGGACGCTCGGCTGCCA................................................................................2218.008.00------------1.00---------1.00-------------------1.00--------------2.00---------------------------------------------------1.00---------1.00-------1.00--------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGTTT...............................................2217.002.00--1.00-----1.00--1.00-----2.00-----------1.00---------------------------------------------------------1.00------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGTGTGTCCAGATCAGT............................................2317.001.00--1.001.00---1.00-------1.00---------------1.00----------------------------------1.00--------------------------------------1.00------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGATCAGT............................................2517.004.00-1.00-1.00-------1.00--------1.00-------------------1.00---------------------------------------------------------------------1.00----------1.00--------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCAGCG.............................................................................2217.007.00--1.00-2.001.00-----------1.00-------1.00--------------------------------------1.00-----------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGA.................................................2016.006.00-2.00-------1.00---1.001.00--------------------1.00----------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGATT...............................................2216.004.00--1.00--1.00----------1.00----------------------------------1.00---------------------------------------1.00------------------------------1.00-------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGACC...............................................2215.006.00-1.00----------1.00--------1.00----1.00---------------------------------------------------------------------------------------1.00---------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTCTGGACGCTCGGCTGCC.................................................................................2215.005.00-1.00----------1.00---------------1.00------------------------------------------------------------------------------1.00---------------------1.00------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGAAGA..............................................2315.006.00--------------4.00-----------1.00-------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGGACGCTCGGCTGCCAGC..............................................................................2314.004.00-1.001.00----------1.00-----------------------------------------------------------------------------------------1.00--------------------------------
..........................TGGACATCGTGAAAGGCTTGGCAAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................274.000.00----------------------------------------------------------1.00-------------1.00-------------------1.00-------------------------1.00-----------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGATCAG.............................................2414.004.00----1.00--------------------------1.00---------------1.00-------------------------------------------------------------------1.00--------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTCTGGACGCTCGGCTGC..................................................................................2114.004.00-----1.00---------------------------------------1.00---------------------2.00--------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGGACGCTCGGCTGCCA................................................................................2114.004.00-----2.00--------------------------------2.00-------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGAT................................................2114.004.00----1.001.00--1.00---------------------------------------------------------------------------------------------1.00---------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGAAG...............................................2213.006.00------------------------2.00-------------------------------------------------------1.00-------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTGGACGCTCGGCTGCCAT...............................................................................2313.008.00--------1.00------1.00------------------------------------------------------------------------------------------1.00-----------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGAAAA..............................................2313.006.00--1.00----------1.00----------------------1.00---------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGAAA...............................................2213.006.00---------------------1.00-----------------------------------------------1.00--------------------------------------------------1.00---------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGGACGCTCGGCTGCCAGT..............................................................................2313.002.00-1.00----------------1.00--------------------------------------------------------------------------------------------1.00------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGATCA..............................................2313.003.00---------1.00----------------------------------------------------1.00------1.00------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCAGCGCT...........................................................................2413.0038.00----------------------------------1.00-------1.00----------------1.00----------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGGCTGCCAGCGC............................................................................1613.003.00------------------------------3.00---------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGTGTGTCCAGATCAGA............................................2313.001.00-------1.00----------------------------1.00----------------------------------------------------------1.00----------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGAAT...............................................2213.006.00--------------------------------------------------1.00------------------------------------------------------------------------1.00--------1.00---
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGGTT...............................................2213.002.00--------------------------------------------3.00-------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGGACGCTCGGCTGCCAT...............................................................................2212.004.00----------------------1.00-------------------------------------------1.00---------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTCTGGACGCTCGGCTG...................................................................................2012.002.00-----1.00----------------------1.00-----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTGGACGCTCGGCTGCCATAC.............................................................................2512.008.00-------------------2.00--------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTCTGGACGCTCGGCTGCCAT...............................................................................2412.0015.00------------------1.00------------------------------------------------------------------------------1.00--------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGAAC...............................................2212.006.00------------------------------------1.00-----------------------------------------------------------------------1.00---------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGGACGCTCGGCTGCCAG...............................................................................2212.002.00------------1.00------------1.00--------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGATGAAGCGGTCCT....1812.002.00--------------------------------2.00-------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCAGTT.............................................................................2212.001.00-2.00--------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAG..................................................1912.002.00------------------------------------------------------------2.00---------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGATCC..............................................2312.0016.00-----------------------2.00----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCAGCGCA...........................................................................2412.0038.00----------------1.00-------------------------------1.00---------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................CCCCTGGGAAGAGAGGTAAGTCTGGACGCTCGGCTGCCAGCGCCCTGAGCTGTGGCTCTGTGTGTCCAG..................................................6912.002.00----------------------------------------------------2.00-----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTGGACGCTCGGCTGCCATT..............................................................................2412.008.00-------------------------------------------------------1.00--------1.00-----------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGTCC...............................................2212.002.00-----------------------------------------------------------------2.00----------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTCTGGACGCTCGGCT....................................................................................1912.002.00-----------------------------------------1.00---------------------------------------------------------------------------1.00------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGACT...............................................2212.006.00--1.00--------------------1.00----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................AGAGAGCCGGGACCCAAA.................................................................................................................182.000.00---------------------------------------1.00----------------------------------1.00-------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGGACGCTCGGCTGCCAGC..............................................................................2211.001.00----------------------------------------------------------------------------------------------1.00-----------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCAGT..............................................................................2111.001.00--------1.00-------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................AGCTTTTTGTTGAAAAT............................................................................................................................................................................................................................................................................................................................................................................................171.000.00----------------------------------------------------------------------------------------------------------------------------------1.00-----
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGTGTGTCCAGATC...............................................2011.001.00-----------------------------------------------1.00----------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGTT................................................2111.002.00------------------------------------------------------------------------------------------1.00---------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGGACGCTCGGCTGCCATT..............................................................................2311.004.00--------------------------------------1.00-------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGTCGA..............................................2311.002.00----------------------------------1.00-----------------------------------------------------------------------------------------------------
......................................................................................................................TATCTGACAGCTTTTTGTTGAAAAGG...........................................................................................................................................................................................................................................................................................................................................................................................2611.001.00----------------------------------------------------------------------------------1.00-----------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCA................................................................................1911.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCACCGC............................................................................2311.001.001.00---------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................TCAGAGAGCCGGGACATCA..................................................................................................................191.000.00----------------------------------------------1.00-----------------------------------------------------------------------------------------
....CTCGATCTCAGCCAGTACGCCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00--------------------------------------------------------1.00-------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCTCTGTGTGTCCAGATCAGT............................................241.000.00-------------------------------------------------------------1.00--------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGGACGCTCGGCTGCCAGTA.............................................................................2411.002.00-------1.00--------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGACA...............................................2211.006.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGAAGCGGTCCTGGCG2011.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTGGACGCTCGGCT....................................................................................1811.001.00-----------------------------------------1.00----------------------------------------------------------------------------------------------
....................................................GAGTGTGCTGCCCACTCTGGACAAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00--------------------------------------------------------------------------------------1.00-------------------------------------------------
.........................CTGGACATCGTGAAAGGCTTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-------1.00--------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGAAAC..............................................2311.006.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGGACGCTCGGCTGCCAGCG.............................................................................2311.001.00--------------------------------------------------------------------1.00-------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTCTGGACGCTCGGCTGCCAAT..............................................................................2511.0015.00--------------------1.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGAATT..............................................2311.006.00----------------------------1.00-----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGGACGCTCGGCTGCCAGTT.............................................................................2411.002.00----------------1.00-----------------------------------------------------------------------------------------------------------------------
...............................................................CCACTCTGGACAAGCAGACCTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00------------------------1.00---------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGTTA...............................................2211.002.00----------------------------------------------------------------------------------------------------------------------------1.00-----------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGGCTGCCAGCGGTT..........................................................................181.000.00-----------------------------------------------------1.00----------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGTGTGTCCAGATCAG.............................................2211.001.00-------1.00--------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGTC................................................2111.002.00--1.00-------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTGGACGCTCGGCTGCCAAAA.............................................................................2511.008.00-----------------------------1.00----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCAGCGA............................................................................2311.007.00---------------1.00------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGTAAA..............................................2311.002.00--------------------------------------------------------------1.00-------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGATGGATGAAGCGGTCCTGGC.2511.001.00-----------------------------------------------------------------------------------------------------------------------------------1.00----
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCAGCTC............................................................................2311.0012.00------------------1.00---------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGATGGATGAAGCGGGC......211.000.00--------1.00-------------------------------------------------------------------------------------------------------------------------------
.......................CCCTGGACATCGTGAAAGGCTTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00---------------------------------------------------------------1.00------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGTGTGTCCAGATCAGT............................................211.000.00-----------1.00----------------------------------------------------------------------------------------------------------------------------
.......................CCCTGGACATCGTGAAAGGCTTGGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTCTGGACGCTCGGCTA...................................................................................2011.002.00-------------------------------------------1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGACGCTCGGCTGCCAGCGC............................................................................2211.001.00-----------------------------------------------------------------------------1.00----------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTCTGGACGCTCGGCTTA..................................................................................2111.002.00-----1.00----------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGAC................................................2111.006.00--------------------------------------------------------------------------------------------------------1.00-------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGCTT...............................................2211.002.00---------1.00------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCAGCGAA...........................................................................2411.007.00----------------1.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTGGACGCTCGGCTGCCATA..............................................................................2411.008.00-----------------------------------------------------------------------1.00----------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCTGCCAGCGCCCTGAGCTGTGG................................................................2511.001.00------------------1.00---------------------------------------------------------------------------------------------------------------------
...................TACGCCCTGGACATCGTGAAAGGCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00----------------------------------------------------------------------------------------------------------------1.00-----------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTCTGGACGCTCGGCTGCCATAT.............................................................................2611.0015.00--------------------1.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGGACGCTCGGCTGCCAGCT.............................................................................2411.004.00--------------------------------------------------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTGGACGCTCGGCTGCC.................................................................................2111.001.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTCTGGACGCTCGGCTGA..................................................................................2111.002.00----------------------------------------------------------------------1.00-----------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGTCA...............................................2211.002.00-----------------------------1.00----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCAGCGT............................................................................2311.007.00------------------------------------------------1.00---------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGGACGCTCGGCTGCCAAT..............................................................................2311.004.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CGGGACCCCTGGGAAGAGAGGG......................................................................................................221.000.00---------------------------------------------------1.00------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTGGACGCTCGGCTGCCATTT.............................................................................2511.008.00-------------------------------------------------------------------------------1.00--------------------------------------------------------
..........................................................................................................................TGACAGCTTTTTGTTGAAAAGGGGTG.......................................................................................................................................................................................................................................................................................................................................................................................2611.001.00------------------------------------------------------------------------------1.00---------------------------------------------------------
..........................TGGACATCGTGAAAGGCTTGGCAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.00----1.00-----------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTGGACGCTCGGCTGCCAATT.............................................................................2511.008.00---------------------------------------------------------------------------------------------1.00------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTGGACGCTCGGCTGCCAA...............................................................................2311.008.00---------------1.00------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATCAGCTGAAGTCCC...................................181.000.00-----------------------------------------------------1.00----------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCAGCGCTTTG........................................................................2711.0038.00---------1.00------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCGAGC..............................................................................211.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTCTGGACGCTCGGCTGCCT................................................................................2311.005.00----------------------------------------------1.00-----------------------------------------------------------------------------------------
....................ACGCCCTGGACATCGTGAAAGGCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00---------------------1.00------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGGGAAGAGAGGTGAGT..................................................................................................201.000.00---------------------------------------------------------------------------------1.00------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGATCATT............................................2511.003.00-----------------------------------------------1.00----------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGATGGATGAAGCGGTCCTGGCG2711.001.00--------------------------------------------------------------------------------------------------------------------------------1.00-------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAAGTCCAACATTT.............................181.000.00--------------------------------------------------------1.00-------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCTCGGCTGCCAG...............................................................................2011.001.00---------------------------------------------------------------------------1.00------------------------------------------------------------
.....TCGATCTCAGCCAGTACGCCCTAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.00--------1.00-------------------------------------------------------------------------------------------------------------------------------
.........................CTGGACATCGTGAAAGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00------------------------------------------------------------------------------------------------1.00---------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGATTT..............................................2311.004.00----------------------------------------------------------------------------1.00-----------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCAGATCAA.............................................2411.003.00--------------------------------------------------------------------------------------------------1.00-------------------------------------
........................................................................................................................................................................................................................CCCCGTGATGAAAGG....................................................................................................................................................................................................................................................................................................1520.500.50--------------------------------------------------------------------------------------------------------------------------------------0.50-
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTCTGTGTGTCCA...................................................1820.500.50-------------------------------------------------------------------------------------------------------------------------------------0.50--
....................................................................................................................................................................................................................GAAACCCCGTGAT..........................................................................................................................................................................................................................................................................................................1390.110.11---------------------------------------------------------------------------------------------------------------------------------------0.11

Antisense strand
GACACTCGATCTCAGCCAGTACGCCCTGGACATCGTGAAAGGCTTGGCAAGTGAGTGTGCTGCCCACTCTGGACAAGCAGACCTCTGCAGCCCCTGATGCTCCTGGCAGTTCCTGTTGTATCTGACAGCTTTTTGTTGAAAAGGGGTGGGGAACAGCTCCTTGGGTTAAAAAGGTGGTTTCTGCCAAGCATGCAAACTCCAGTGTAATCCTGGAAACCCCGTGATGAAAGGAGAGAGCCCGCTCCCACAGTTTGTTCTCTGCCCTGTACTGTGTGCCATGGCAGCCCCTCCCCCAGACAGAGTAAATAAATGTTAAATAAATGAAAAGGAAAAGGCTTTTACTCCCTTCAAGGGGAGGAGGTCCTTTCCCGAGGTGGTTGATAGTTGAGGTCAGAGAGCCGGGACCCCTGGGAAGAGAGGTAAGTCTGGACGCTCGGCTGCCAGCGCCCTGAGCTGTGGCTCTGTGTGTCCAGATCAGCTGAAGTCCAACAGCCCCCGCCTGATGGATGAAGCGGTCCTGGCG
...................................................................................................................................................................................................................................................................................................................................................................................................................................((..((((((((((.(((..((((..((.....))..)))).))).))))))))))..))............................................
...................................................................................................................................................................................................................................................................................................................................................................................................................................420.........................................................480.........................................
SizePerfect hitTotal NormPerfect NormmjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
mjTestesWT4()
Testes Data. (testes)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR206940(GSM723281)
other. (brain)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
mjTestesWT3()
Testes Data. (testes)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
mjLiverWT1()
Liver Data. (liver)
mjTestesWT2()
Testes Data. (testes)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
mjLiverWT3()
Liver Data. (liver)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR073955(GSM629281)
total RNA. (blood)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR037906(GSM510442)
brain_rep3. (brain)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR095855BC10(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR037909(GSM510446)
newborn_rep2. (total RNA)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)
SRR037928(GSM510466)
e7p5_rep2. (embryo)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR206941(GSM723282)
other. (brain)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
SRR037930(GSM510468)
e7p5_rep4. (embryo)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR059767(GSM562829)
DN3_Dicer. (thymus)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
...........................................................................................................................................................................................................................................................................................GCCCCTCCCCCAGACAGAGTAAATA....................................................................................................................................................................................................................... 2518.008.00------8.00---------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTCCAACAGCCCCCGCCTGATG.................. 2512.002.00-----------------------------------2.00----------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCCAGATCAGCTGAAGTCCAACA................................ 2612.002.00---------------------------------------------2.00------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCCCCGCCTGATGGG................ 181.000.00-----------------------------------------1.00----------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................AGCCCGCTCCCACAGTTTGCC........................................................................................................................................................................................................................................................................... 211.000.00---------------------------1.00------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCAGCTGAAGTCCA................................... 1711.001.00---------------------------------------------------------------1.00------------------------------------------------------------------------
...........................................................................................................................................................................................................................................AGCCCGCTCCCACAGTGCT............................................................................................................................................................................................................................................................................. 191.000.00-------------------------------------1.00--------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................CCGCTCCCACAGTTTCA............................................................................................................................................................................................................................................................................ 171.000.00-------------------------------------------------1.00--------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................TGTTCTCTGCCCTGTACTGTGTGCCA..................................................................................................................................................................................................................................................... 2611.001.00----------------------------------------------------------1.00-----------------------------------------------------------------------------
...........................................................................................................................................................................................................................................AGCCCGCTCCCACAGTGCC............................................................................................................................................................................................................................................................................. 191.000.00---------------------------1.00------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACAGCCCCCGCCTCGA................... 191.000.00--------------------------------------------------------------------------------------------------------------------1.00-------------------
...........................................................................................................................................................................................................................................AGCCCGCTCCCACAGTTGTG............................................................................................................................................................................................................................................................................ 201.000.00---------------------------1.00------------------------------------------------------------------------------------------------------------
...............................................................................GACCTCTGCAGCCCCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................... 171.000.00---------------------------------1.00------------------------------------------------------------------------------------------------------
..........................................................................AAGCAGACCTCTGCAACT............................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00-------------------------------------------1.00--------------------------------------------------------------------------------------------
................................................................................ACCTCTGCAGCCCCTGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................ 191.000.00-------------------------------------------------------------------------1.00--------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACAGCCCCCGC........................ 1511.001.00-------------------------------------------1.00--------------------------------------------------------------------------------------------
...................................................TGAGTGTGCTGCCCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 161.000.00-------------------------------------------------1.00--------------------------------------------------------------------------------------
..................................................................................................................................................................GGGTTAAAAAGGTGGTCTA...................................................................................................................................................................................................................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------------------------------------------1.00----------
....CTCGATCTCAGCCAGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00----------------------------------------------------------------------1.00-----------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................GGTCAGAGAGCCGGGACA..................................................................................................................... 181.000.00---------------------------------------1.00------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................AGAGAGCCCGCTCCC..................................................................................................................................................................................................................................................................................... 1540.250.25-------------------------------------------------0.25--------------------------------------------------------------------------------------