ID: mmu-mir-6998
GENE: Fubp3(12)
chr2:31467805-31468054+


(1)
AGO.mut
(2)
AGO1.ip
(19)
AGO2.ip
(2)
AGO3.ip
(7)
B-CELL
(42)
BRAIN
(12)
CELL-LINE
(2)
DCR.mut
(2)
DGCR8.mut
(15)
EMBRYO
(13)
ESC
(8)
FIBROBLAST
(1)
KIDNEY
(5)
LIVER
(1)
LUNG
(4)
LYMPH
(21)
OTHER
(6)
OTHER.mut
(1)
PIWI.mut
(6)
SKIN
(7)
SPLEEN
(21)
TESTES
(1)
THYMUS
(1)
TOTAL-RNA
(1)
UTERUS

Sense strand
GACTGGCTGTGTGGTGGTCTTGGTCATTTGAGGGGCAGAGCCACCGCTGCAGACATTGTCTGCTGGGGAAGGAAGCTAGTGTGAGCGCAGAGCTGTCTCCTTCACTTGACTTGCCTCCCATAGTGGCTTCCCTGGGTGGGCCTGGGCAGAGGGCAAAGTGACTCGGTGACACGGGTGAGAGCTGCTCTGTGCCCACACAGGGTGCCAGCCTCGGAGCCCCTGCAGCCTTCGGACAGAGCCCCTTCAGCCA
.......................................................................................................................................(((....((((((.(((((..(((.(((((......)))))....)))))))).)))))))))....................................................
.......................................................................................................................................136.............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR037937(GSM510475)
293cand2. (cell line)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR390298(GSM849856)
cell line: NIH-3T3cell type: fibroblastinfect. (fibroblast)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
mjTestesWT3()
Testes Data. (testes)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR306527(GSM750570)
19-24nt. (ago2 brain)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR073955(GSM629281)
total RNA. (blood)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesWT2()
Testes Data. (testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR206942(GSM723283)
other. (brain)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
GSM475281(GSM475281)
total RNA. (testes)
SRR037928(GSM510466)
e7p5_rep2. (embryo)
SRR073954(GSM629280)
total RNA. (blood)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR060845(GSM561991)
total RNA. (brain)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR059776(GSM562838)
MEF_Dicer. (MEF)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
GSM361415(GSM361415)
WholeCerebellum_P6_p53--_Ink4c--_rep4. (brain)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
GSM361398(GSM361398)
CGNP_P6_p53--_Ink4c--_rep1. (brain)
SRR206940(GSM723281)
other. (brain)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
GSM361407(GSM361407)
CGNP_P6_Ptc+-_Ink4c--_rep5. (brain)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR206939(GSM723280)
other. (brain)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR306528(GSM750571)
19-24nt. (ago2 brain)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
mjLiverWT1()
Liver Data. (liver)
GSM416732(GSM416732)
MEF. (cell line)
SRR037929(GSM510467)
e7p5_rep3. (embryo)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
SRR037927(GSM510465)
e7p5_rep1. (embryo)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR037919(GSM510457)
e12p5_rep1. (embryo)
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACACA...................................................22129.0029.00-1.001.002.00------2.00-5.00---2.00-1.00--1.00-1.00-----2.001.00--------2.00--1.001.00-------1.00---1.00---------------1.00----------------------------1.00--------------1.00----------1.00---------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCACA.....................................................22121.0021.004.00---------2.00--1.00-3.001.00---1.00----------------1.00------1.00---------1.00----------------1.00-----------------------1.00----------------------1.001.00-----1.00-----------1.00----------------------------
............................................................................................................................................CCTGGGCAGAGGGCAAAGTGACT.......................................................................................23118.0018.00----1.001.00-------2.00--------1.00---1.00----2.00---------------1.00-------1.00-1.00------1.00--1.00--1.00---------------------------------1.00--1.001.00----1.00----------------------------------------------------
....................................................ACATTGTCTGCTGGGTTTA...................................................................................................................................................................................19714.430.29-4.002.144.43-----0.14-----------------------0.292.43-------------------------0.14----------------------------------------------------------------------------------0.29---------0.140.14-------0.140.14--
.............................................................................................................................................CTGGGCAGAGGGCAAAGTGACT.......................................................................................22114.0014.00-----2.00-4.00--1.00--1.00-------------1.00---1.00------1.00-----1.00-----------------------------------1.00---1.00---------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACA.....................................................20112.0012.001.001.00-2.00------1.00---1.00--------------1.00------1.00----1.00------------------------------------2.00-1.00-------------------------------------------------------------------------------------
....................................................ACATTGTCTGCTGGGGTT....................................................................................................................................................................................1811.000.00-2.00---------6.00---------------------3.00------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCACAC....................................................23110.0010.00------8.00----------1.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCAC......................................................2119.009.00--1.00-2.00----------1.00----1.002.00------1.00-------------------------------------------------------------------1.00---------------------------------------------------------------------
............................................................................................................................................CCTGGGCAGAGGGCAAAGTGAC........................................................................................2219.009.001.00----2.00----------------1.00------------1.00------------------------1.001.00------------------------------1.00-------------------1.00-----------------------------------------------------
.............................................................................................................................................CTGGGCAGAGGGCAAAGTGAC........................................................................................2119.009.00-----2.00---1.00----1.00----------1.00-------------------------------1.00-------------------------------------------1.00-------------------1.001.00-------------------------------------------
............................................................................................................................................CCTGGGCAGAGGGCAAAGTGA.........................................................................................2119.009.00-------------------------1.00-2.00--1.00------------1.00------------1.00----1.00--------------------------------------------1.00-------------------------------1.00---------------------------
....................................................ACATTGTCTGCTGGGTTTT...................................................................................................................................................................................1978.430.29-1.860.710.86-----0.29------1.00----0.29-0.14---------0.140.43--------------------0.290.14--------------------------0.57--------0.140.14-------------------------------------------------0.430.29-------0.290.14----------0.140.14
..................................................................................................................................................................................GAGCTGCTCTGTGCCCACACAG..................................................2217.007.00------------------2.00-------1.00-----1.00---1.00-------------1.00------------------------1.00------------------------------------------------------------------------------------------
..............................................................................................................................................TGGGCAGAGGGCAAAGTGACT.......................................................................................2117.007.00--1.00----5.00------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCACACT...................................................2416.0010.003.001.00---------------------1.00------------------------------------------------------------------------------------------------------------1.00---------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACACT...................................................2215.003.00----------------------1.00----1.00--1.00-------------1.00---------1.00---------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCACT.....................................................2215.009.00---------3.00--------------------------------1.00------------------------------------------------------------------1.00--------------------------------------------------------
.....................................................CATTGTCTGCTGGGGTTC...................................................................................................................................................................................185.000.00--------3.00------------------------------------2.00------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCACAT....................................................2314.0021.00--------------1.00---------------------------------3.00---------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CTGGGCAGAGGGCAAAGTGA.........................................................................................2014.004.00----------------------------1.00-----------1.00-------------------------1.00---1.00-----------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACACAT..................................................2314.0029.00---------3.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................GAGCTGCTCTGTGCCCACACAGT.................................................2314.007.00------------2.00----------------------------------1.00-------------------------------------1.00--------------------------------------------------------------------------------
..................................................................................................................................................................................GAGCTGCTCTGTGCCCACACA...................................................2114.004.00-----------------2.00--------------1.00-------------------------------------------------------------1.00-----------------------------------------------------------------------
............................................................................................................................................CCTGGGCAGAGGGCAAAGTGACTC......................................................................................2414.004.00------------------------2.00-------------1.00----------------------------------------------------------------------------------------------------1.00--------------------------
....................................................ACATTGTCTGCTGGGTTA....................................................................................................................................................................................1873.430.29-1.000.860.71-----------------------------0.14----------------------0.14------------------------------------------------------------------------------------------------0.140.29------0.14----
..................................................................................................................................................................................GAGCTGCTCTGTGCCCACACAGA.................................................2313.007.00-----------------------------------------------1.00---1.00-----------------1.00------------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACAT....................................................2113.0012.00--1.00-------------------------------------------2.00-----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................GAGCTGCTCTGTGCCCACACAT..................................................2213.004.00-----------------------------------2.00--------------------------1.00-------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCAT......................................................2113.001.001.00-----------------1.00---------------------------------------------------------------1.00-----------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACAC....................................................2113.003.00--1.00--------------------------------------2.00----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CCTGGGCAGAGGGCAAAGTGACTCA.....................................................................................2512.004.00--------------------------------------1.00-----------------------------------------------------------------------------------------------------1.00-------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCAAA.....................................................2212.001.00---------------------1.00---------------------------------------------------------1.00--------------------------------------------------------------------------------------
.............................................................................................................................................CTGGGCAGAGGGCAAAGTGAA........................................................................................2112.004.00-------------------------1.00------------------------------1.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................GAGCTGCTCTGTGCCCACAAAA..................................................222.000.00-------------------------------------------------------------------------2.00--------------------------------------------------------------------------------------------
.............................................................................................................................................CTGGGCAGAGGGCAAAGTGACTTA.....................................................................................2412.0014.00-------------------------------------------------1.00-------------------------------------------------------------1.00------------------------------------------------------
....................................................................................................................................................................................GCTGCTCTGTGCCCACACAGT.................................................212.000.00-----------------------------------------------------------------2.00----------------------------------------------------------------------------------------------------
..............................................................................................................................................TGGGCAGAGGGCAAAGTGA.........................................................................................1912.002.00--1.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................GTGGGCCTGGGCAGAGGGCAAAGTGACTCGGTGACACGGGTGAGAGCTGCTCTGTGCCCACACCA..................................................652.000.00-----------------------------------------------------2.00----------------------------------------------------------------------------------------------------------------
.................TCTTGGTCATTTGAGTTAT......................................................................................................................................................................................................................192.000.00--------------------2.00-------------------------------------------------------------------------------------------------------------------------------------------------
....................................................ACATTGTCTGCTGGGGTTCT..................................................................................................................................................................................202.000.00---------------------------------------------1.00-------------------------------------1.00----------------------------------------------------------------------------------
............................................................................................................................................CCTGGGCAGAGGGCAAAGTT..........................................................................................2012.001.00-------------------------------------------------------------------------------------------------------------------------------------1.00--1.00-----------------------------
.............................................................................................................................................CTGGGCAGAGGGCAAAGTGACTAAA....................................................................................2512.0014.001.00------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CTGGGCAGAGGGCAAAGTGACA.......................................................................................2212.009.00------------------------------------------------------------1.00----------------1.00----------------------------------------------------------------------------------------
.................................................................................................................................CCCTGGGTGGGCCTGGGCAGA....................................................................................................2112.002.00------2.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCC........................................................1912.002.00---------------1.00----------------1.00-------------------------------------------------------------------------------------------------------------------------------------
...................................................GACATTGTCTGCTGGGTTTC...................................................................................................................................................................................202.000.00-----------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CCTGGGCAGAGGGCAAAGTG..........................................................................................2012.002.00-------------------------1.00------------------------------------------------------------------------1.00-------------------------------------------------------------------
..................................................................................................................................................................................GAGCTGCTCTGTGCCCACACAA..................................................2212.004.00---------------------------------------------------------------------1.00-----------------------1.00------------------------------------------------------------------------
.........TGTGGTGGTCTTGGTACCG..............................................................................................................................................................................................................................192.000.00-------------------2.00--------------------------------------------------------------------------------------------------------------------------------------------------
.................TCTTGGTCATTTGAGGGGCAGAGCCA...............................................................................................................................................................................................................2612.002.00-------------2.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................ACATTGTCTGCTGGGTTAA...................................................................................................................................................................................1971.430.29-0.570.290.29------------0.14-----------------0.14-----------------------------------------------------------------------------------------------------------------------------------
....................................................ACATTGTCTGCTGGGTTC....................................................................................................................................................................................1871.290.29---0.29-----0.14-----------0.29----------------------------------------------------------------0.29----------------------------------------------------------------------0.29--------
....................................................ACATTGTCTGCTGGGCTT....................................................................................................................................................................................1871.140.29-0.290.29--------0.29--------------------------------------------------------------------------0.14-----------------------------------------------------------------0.14-------------
................................................................................................................................TCCCTGGGTGGGCCTGCACT......................................................................................................201.000.00--------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
..........................................................................................................................................................................ACGGGTGAGAGCTGCTCTGTGC..........................................................2211.001.00---------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCATT.....................................................2211.001.00---------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................CCCTGGGTGGGCCTGAC........................................................................................................171.000.00---------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCA.......................................................2011.001.00--------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACAAAC..................................................2311.0012.00--------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.....................................................CATTGTCTGCTGGGGTTCA..................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------
.............................................................................................................................................CTGGGCAGAGGGCAAAGTGT.........................................................................................201.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCAAG......................................................211.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................GTGTGAGCGCAGAGCTGTC.........................................................................................................................................................1911.001.00----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACACTAA.................................................2411.003.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CCTGGGCAGAGGGCAAAGTGAA........................................................................................2211.009.00----------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................GTGGGCCTGGGCAGAGGGCAAAGT...........................................................................................2411.001.00-------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCATAG....................................................211.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................ACATTGTCTGCTGGGGTTA...................................................................................................................................................................................191.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCAAAC....................................................2311.001.00----------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------
................................................................................................................................................GGCAGAGGGCAAAGTGACTCGGTGACACGGGT..........................................................................3211.001.00---------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------
.......................................................................................................................................GTGGGCCTGGGCAGAGGGCAAAGTGACTCGGT...................................................................................3211.001.00----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACACACT.................................................2411.0029.00--------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------
.......................................................................................................................................GTGGGCCTGGGCAGAGGGCA...............................................................................................2011.001.00--------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
..........GTGGTGGTCTTGGTCGTC..............................................................................................................................................................................................................................181.000.00---------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCACACC...................................................2411.0010.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CTGGGCAGAGGGCAAAGTGACTT......................................................................................2311.0014.00-----------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................AGCCTTCGGACAGAGCCCCTT......2111.001.00--------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACTTT...................................................221.000.00------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.............................................................................AGTGTGAGCGCAGAGCTGTC.........................................................................................................................................................2011.001.00-------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACATT...................................................2211.0012.00------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCAA......................................................2111.001.00------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TGGGCAGAGGGCAAAGTGACTCG.....................................................................................2311.001.00------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCACTAA...................................................2411.009.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACAAT...................................................2211.0012.00-------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................CTCGGAGCCCCTGCACTG.......................181.000.00-------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................GCCTGGGCAGAGGGCAAAGTGAC........................................................................................2311.001.00----------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCAAG.....................................................2211.001.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................AGTGTGAGCGCAGAGCTGTCT........................................................................................................................................................2111.001.00----------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
.............................................................................................................................................CTGGGCAGAGGGCAAACTGA.........................................................................................201.000.00------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................................................GAGCTGCTCTGTGCCCACACAGATA...............................................2511.007.00---------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------
.......................................................................................................................................GTGGGCCTGGGCAGAGGGC................................................................................................1911.001.00--------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCACACA...................................................2411.001.00--------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CCTGGGCAGAGGGCAAAGT...........................................................................................1911.001.00---------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
..................................................AGACATTGTCTGCTGGGTTTC...................................................................................................................................................................................211.000.00----------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCACAA....................................................2311.0021.00-----------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................GAGCTGCTCTGTGCCCACACAGAA................................................2411.007.00---------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
............................................................................................................................................CCTGGGCAGAGGGCAAAGTGACTCGT....................................................................................2611.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACACAGT.................................................241.000.00------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................GCCTGGGCAGAGGGCAAAGTGA.........................................................................................2211.001.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACACC...................................................2211.003.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCAGAGGGCAAAGTGGAAA......................................................................................191.000.00----------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------
...........................................................................................................................................GCCTGGGCAGAGGGCAAAGTGACTCATT...................................................................................281.000.00-------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCATTT....................................................2311.001.00-----------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TGCTCTGTGCCCACACAG..................................................1811.001.00----------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCACACAAG.................................................2611.001.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................TGCCAGCCTCGGAGCCCC..............................1811.001.00--------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
...................................................................GAAGGAAGCTAGTGTCCGT....................................................................................................................................................................191.000.00--------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................GAAGGAAGCTAGTGTGAGCGCAGA...............................................................................................................................................................2411.001.00-----------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
............................................................................TAGTGTGAGCGCAGAGCTGT..........................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------
..................................................................................................................................................................................GAGCTGCTCTGTGCCCACACAAT.................................................2311.004.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................TGGGCCTGGGCAGAGGTCC...............................................................................................191.000.00----------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CTGGGCAGAGGGCAAAGGGA.........................................................................................201.000.00----------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
.....................................................CATTGTCTGCTGGGGTT....................................................................................................................................................................................171.000.00----------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................GCCAGCCTCGGAGCCCCTGCA..........................2111.001.00----------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACCCA...................................................221.000.00-------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
............................................................................................................................................CCTGGGCAGAGGGCAAAGTGACTCG.....................................................................................2511.001.00------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACACCT..................................................2311.003.00----------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACACTT..................................................2311.003.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CTGGGCAGAGGGCAAAGTTACT.......................................................................................221.000.00-------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................CGGGTGAGAGCTGCTCTGTGCC.........................................................2211.001.00------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACACAAG.................................................2411.0029.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................CATTGTCTGCTGGGGTTAA..................................................................................................................................................................................191.000.00----------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................AGAGCTGCTCTGTGCCCACACAAA.................................................2411.0029.00----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
....................................................ACATTGTCTGCTGGGCTTC...................................................................................................................................................................................1970.860.29-0.290.140.14------------0.14--------------------------------------------------------------------------0.14--------------------------------------------------------------------------
....................................................ACATTGTCTGCTGGGTTTG...................................................................................................................................................................................1970.710.29-0.290.140.14------------------------------0.14-----------------------------------------------------------------------------------------------------------------------------------
....................................................ACATTGTCTGCTGGGTAA....................................................................................................................................................................................1870.570.29-0.14-0.29-------------------------------------------------------------------------------------------------------------------------------------------0.14----------------------
....................................................ACATTGTCTGCTGGGTTGA...................................................................................................................................................................................1970.430.29-0.29--------------------------------0.14-----------------------------------------------------------------------------------------------------------------------------------
....................................................ACATTGTCTGCTGGGTTAT...................................................................................................................................................................................1970.430.29--0.14------------------------------0.140.14-----------------------------------------------------------------------------------------------------------------------------------
....................................................ACATTGTCTGCTGGGTCT....................................................................................................................................................................................1870.290.29---0.14------------------------------0.14-----------------------------------------------------------------------------------------------------------------------------------
....................................................ACATTGTCTGCTGGG.......................................................................................................................................................................................1570.290.29----------------0.14-----------------------------------------------------------------------------------------------------------------------------------------------0.14-----
................................................................................GTGAGCGCAGAGCTG...........................................................................................................................................................1550.200.20--------------------------------------------------------------------------------------------------------------------------------------------------------------0.20-------
....................................................ACATTGTCTGCTGGGATT....................................................................................................................................................................................1870.140.29----------------0.14-----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................ACATTGTCTGCTGGGTGT....................................................................................................................................................................................1870.140.29-------------------------------------------------------0.14--------------------------------------------------------------------------------------------------------------

Antisense strand
GACTGGCTGTGTGGTGGTCTTGGTCATTTGAGGGGCAGAGCCACCGCTGCAGACATTGTCTGCTGGGGAAGGAAGCTAGTGTGAGCGCAGAGCTGTCTCCTTCACTTGACTTGCCTCCCATAGTGGCTTCCCTGGGTGGGCCTGGGCAGAGGGCAAAGTGACTCGGTGACACGGGTGAGAGCTGCTCTGTGCCCACACAGGGTGCCAGCCTCGGAGCCCCTGCAGCCTTCGGACAGAGCCCCTTCAGCCA
.......................................................................................................................................(((....((((((.(((((..(((.(((((......)))))....)))))))).)))))))))....................................................
.......................................................................................................................................136.............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR037937(GSM510475)
293cand2. (cell line)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR390298(GSM849856)
cell line: NIH-3T3cell type: fibroblastinfect. (fibroblast)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
mjTestesWT3()
Testes Data. (testes)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR306527(GSM750570)
19-24nt. (ago2 brain)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR073955(GSM629281)
total RNA. (blood)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesWT2()
Testes Data. (testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR206942(GSM723283)
other. (brain)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
GSM475281(GSM475281)
total RNA. (testes)
SRR037928(GSM510466)
e7p5_rep2. (embryo)
SRR073954(GSM629280)
total RNA. (blood)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR060845(GSM561991)
total RNA. (brain)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR059776(GSM562838)
MEF_Dicer. (MEF)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
GSM361415(GSM361415)
WholeCerebellum_P6_p53--_Ink4c--_rep4. (brain)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
GSM361398(GSM361398)
CGNP_P6_p53--_Ink4c--_rep1. (brain)
SRR206940(GSM723281)
other. (brain)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
GSM361407(GSM361407)
CGNP_P6_Ptc+-_Ink4c--_rep5. (brain)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR206939(GSM723280)
other. (brain)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR306528(GSM750571)
19-24nt. (ago2 brain)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
mjLiverWT1()
Liver Data. (liver)
GSM416732(GSM416732)
MEF. (cell line)
SRR037929(GSM510467)
e7p5_rep3. (embryo)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
SRR037927(GSM510465)
e7p5_rep1. (embryo)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR037919(GSM510457)
e12p5_rep1. (embryo)
...........................................................................................................................TGGCTTCCCTGGGTGGGC............................................................................................................. 18223.0023.00----4.000.50--4.50-0.50------0.50--------------0.50--0.50----------------1.500.500.50----1.50---------------------1.50--0.500.50----1.001.00-------------------------------------1.00--------------0.50-0.50-0.500.50-0.50--------------
...........................................................................................................................TGGCTTCCCTGGGTGGG.............................................................................................................. 1734.004.00----0.33-----0.33------0.33----0.33------------------------------------0.33----------------------0.33----0.330.330.33-------------------------------------------------------0.33---------0.330.33---------
................................................................................................................................TCCCTGGGTGGGCCTGCGC....................................................................................................... 194.000.00-------------------3.00------------------------------------------------1.00-------------------------------------------------------------------------------------------------
................................................................................................................................TCCCTGGGTGGGCCTCGCC....................................................................................................... 193.000.00-------------------------------------------------2.00-1.00------------------------------------------------------------------------------------------------------------------
............................................................................................................................GGCTTCCCTGGGTGGGC............................................................................................................. 1742.502.50----1.50--------------------------0.500.25------------------------------------------------0.25------------------------------------------------------------------------------------
............................................................................................................................................................................................................................TGCAGCCTTCGGACAG.............. 1612.002.00---------------------------------------------------------------1.00--------1.00---------------------------------------------------------------------------------------------
................................................................................................................................TCCCTGGGTGGGCCTGCGCC...................................................................................................... 202.000.00---------------------------------------------------------------------------------------1.00-1.00----------------------------------------------------------------------------
....................................................ACATTGTCTGCTGGGGAGCT.................................................................................................................................................................................. 202.000.00------------------------------------------------------------------------------------------------------------------1.00---------1.00-----------------------------------------
...........................................................................................................................TGGCTTCCCTGGGTGGGCC............................................................................................................ 1922.002.00--------0.50---------------------------0.50--------------------------------------------------------------------------------------------------------------0.50--0.50---------------
..............................................................................................................................CTTCCCTGGGTGGGCACA.......................................................................................................... 182.000.00--------1.00----------------------------------------------------------------------------------------------------------------------1.00--------------------------------------
...........................................................................................................................TGGCTTCCCTGGGTGG............................................................................................................... 1632.002.00----------0.67--0.33---------------------------------------------0.33----------------------0.33--------------------------------------------------------------0.33--------------------
............................................................................................................................GGCTTCCCTGGGTGGGCC............................................................................................................ 181.750.00----1.50------------0.25----------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................TCCCTGGGTGGGCCTCGC........................................................................................................ 181.000.00----------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------
.....................................................................................................................................................................GTGACACGGGTGAGAGAGGA................................................................. 201.000.00---------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------
....................................................ACATTGTCTGCTGGGAGAT................................................................................................................................................................................... 1971.000.00---------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------
................................................................................................................................TCCCTGGGTGGGCCTCG......................................................................................................... 171.000.00--------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
....................................................ACATTGTCTGCTGGGAGCC................................................................................................................................................................................... 1971.000.00--------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------
..........................................................................................................................................................................ACGGGTGAGAGCTGCTCTT............................................................. 191.000.00--------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
................................................................................................................................TCCCTGGGTGGGCCTCGA........................................................................................................ 181.000.00--------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
............................................................................................................................GGCTTCCCTGGGTGGG.............................................................................................................. 161.000.00------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
...............................................................................................................................................................................TGAGAGCTGCTCTGTGCCCACA..................................................... 2211.001.00------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------
.............................................................................................................................GCTTCCCTGGGTGGGC............................................................................................................. 1650.400.40---------------------------------------------------------------------------------0.20--------0.20---------------------------------------------------------------------------
.............................................................................................................................GCTTCCCTGGGTGGGCAA........................................................................................................... 180.400.00---------------------------------------------------------0.200.20-----------------------------------------------------------------------------------------------------------
...........................................................................................................................TGGCTTCCCTGGGTGGGTA............................................................................................................ 190.330.00----0.33-----------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................TGGCTTCCCTGGGTGGGTT............................................................................................................ 190.330.00-------------------------------0.33--------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................GCTTCCCTGGGTGGGCTA........................................................................................................... 180.200.00---------------------------------------------------------------------------------------------------------------------------------------------------------------0.20------
............................................................................................................................GGCTTCCCTGGGTGGG.............................................................................................................. 1680.120.12----0.12-----------------------------------------------------------------------------------------------------------------------------------------------------------------