ID: mmu-mir-6984
GENE: Mrpl21(4)
chr19:3288784-3289033+


(1)
AGO.mut
(16)
AGO2.ip
(1)
AGO3.ip
(11)
B-CELL
(34)
BRAIN
(5)
CELL-LINE
(2)
DCR.mut
(3)
DGCR8.mut
(9)
EMBRYO
(9)
ESC
(6)
FIBROBLAST
(4)
HEART
(2)
KIDNEY
(6)
LIVER
(1)
LUNG
(5)
LYMPH
(19)
OTHER
(2)
OTHER.mut
(1)
OVARY
(4)
PIWI.ip
(2)
PIWI.mut
(2)
SKIN
(8)
SPLEEN
(16)
TESTES
(2)
THYMUS
(2)
TOTAL-RNA
(3)
UTERUS

Sense strand
CTACACAGGAAGCAGAGGTAGGAGGGTCAGAGGTCAGTTTATTCCTTGGATGTAAAGAGAATTTAAGGTTGGTCTGGGCTGCATGAGACCCCACTGCAGAACCAGGAATTCTCTGGGGAGCTTCCGCAAGTTGTGCGTGAAACTGAAAGGCAATGAAGGAGGAGCACTGTCACAGTGTACTTTCTTTCCTGTCTTTCTAGAAAGGAGCTTGTACGAGTTGAAGCCACAGTCATTGAAAAGACAGAATCAT
................................................................................................................................................((((((((..((((((((.((((((...)))))).))))))))..)))))))).....................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
mjTestesWT4()
Testes Data. (testes)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR206941(GSM723282)
other. (brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR206942(GSM723283)
other. (brain)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
mjLiverWT3()
Liver Data. (liver)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)
mjTestesWT3()
Testes Data. (testes)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)
GSM510454(GSM510454)
newborn_rep10. (total RNA)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR306529(GSM750572)
19-24nt. (ago2 brain)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR206939(GSM723280)
other. (brain)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR206940(GSM723281)
other. (brain)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR095855BC8(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR038741(GSM527276)
small RNA-Seq. (brain)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR059765(GSM562827)
DN3_control. (thymus)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
GSM416732(GSM416732)
MEF. (cell line)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR037928(GSM510466)
e7p5_rep2. (embryo)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR038740(GSM527275)
small RNA-Seq. (dicer brain)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR306543(GSM750586)
19-24nt. (ago2 brain)
SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR037935(GSM510473)
293cand3. (cell line)
SRR073955(GSM629281)
total RNA. (blood)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
.............................................................................................................................................ACTGAAAGGCAATGAAGGAGGAG......................................................................................23141.0041.00--3.003.002.001.00-2.00--1.00---1.00-1.00--1.00---1.00--2.002.00------1.00-----1.001.002.00----2.00--1.00------1.00------1.00----1.001.00---1.00--1.00---1.00-----1.00--------------1.00--------------1.00-----------1.00--1.00---1.00--------
.............................................................................................................................................ACTGAAAGGCAATGAAGGAGGAGC.....................................................................................24139.0039.00-3.003.00-3.002.00-1.00--4.002.00--1.002.00-1.002.001.001.00--2.00----1.00-1.00---1.001.00------------------1.001.00-------1.00-----------------1.00-2.00----------------------------------------1.00--------------------
.............................................................................................................................................ACTGAAAGGCAATGAAGGAGG........................................................................................21122.0022.00---2.00---4.00-2.00--7.00---1.00----------1.00----------1.00-------1.00-----------------------------------------------------1.00---------------------------1.00---------1.00------
.............................................................................................................................................ACTGAAAGGCAATGAAGGAGGA.......................................................................................22122.0022.001.00--1.001.00--1.00-1.001.00--1.002.00---2.001.001.00-------------1.00-1.00--------2.00-------------1.00-------------1.00--1.00-----------------1.00-----------------------------------1.00--------------
.................................................................................................................................................................................TACTTTCTTTCCTGTCTTTCTAG..................................................23119.0019.003.00-------6.00-1.001.00-1.00--------------1.00--1.00---------------------2.00--------------------1.00-----------1.00----------------------------1.00-----------------------------
.................................................................................................................................................................................TACTTTCTTTCCTGTCTTTCT....................................................21117.0017.004.00----2.00--2.00----3.00-2.001.00-------------------------1.00---------------------------------1.00---1.00----------------------------------------------------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGAGCA....................................................................................23114.0014.00-1.00----1.00-------------1.00-5.00--------------1.001.00-------1.00-------------1.00---------------------1.00---------------------------------------1.00----------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGAGCAT...................................................................................24113.0014.00---1.00--4.00---------------------1.00-2.00------------------2.00------------------------------------------------------------1.00-----1.00------------------1.00---------
.............................................................................................................................................ACTGAAAGGCAATGAAGGAGGAGCA....................................................................................25113.0013.00-3.00---------1.00--1.00-----------1.00------1.00-1.00----------------------1.00------1.00------1.001.00--------------1.00--------------------------------------------------------
.............................................................................................................................................ACTGAAAGGCAATGAAGGAG.........................................................................................20111.0011.001.00--1.00-----2.00----------------------------------------1.00--------------1.00-------------2.001.00---1.00-----------------------------------------1.00------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGAG......................................................................................21110.0010.00-2.00-1.00-1.001.00--------------5.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TACTTTCTTTCCTGTCTTTCTAGT.................................................2419.0019.004.00--------------------------------------------1.00-------------1.00--2.00--------------------------1.00-------------------------------------------------------
............................................................................................................................................AACTGAAAGGCAATGAAGGAG.........................................................................................2119.009.00-------------1.00--1.00--------1.00-----2.00----------------1.00--------------------------------------------------------1.00------------1.00--1.00-----------------------
..............................................................................................................................................CTGAAAGGCAATGAAGGAGGAG......................................................................................2218.008.001.00---1.00-1.00-------------2.00-------1.001.00------------------------------------------------------------------------------1.00------------------------------------
..............................................................................................................................................CTGAAAGGCAATGAAGGAGGAGC.....................................................................................2318.008.00-----------------4.00---------------------------------2.00-----------------------------------------------1.00-----------------------------------------1.00---
.............................................................................................................................................ACTGAAAGGCAATGAAGGAGGAA......................................................................................2318.0022.00--2.00-1.00-------------------------------1.00-----------1.00-------------------1.00------1.00--------------------------------------1.00------------------------------
............................................................................................................................................AACTGAAAGGCAATGAAGGAGG........................................................................................2216.006.00----------1.00-----1.00--------------------------1.00--------------------------1.00-----------1.00--------------------------1.00-----------------------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGAGC.....................................................................................2216.006.00--1.00--1.00------------1.00-------------------1.00-1.00------------------------------------------------------------------------1.00-------------------------------
.........................................................................................................................................................................................................AAGGAGCTTGTACGAGTTGAAGCCACA......................2716.006.00--------------------------------1.00----------------------------2.00----1.00-----1.00----------------------------------------------------------1.00-------------
..............................................................................................................................................CTGAAAGGCAATGAAGGAGGAGCA....................................................................................2416.006.00--------------1.00----------2.00-----------------------------1.00----------------------2.00------------------------------------------------------------------
.............................................................................................................................................ACTGAAAGGCAATGAAGGAGGAGCAT...................................................................................2615.0013.00---------------1.00----------1.00------1.00-------------------------------------------------------------1.00-----1.00-------------------------------------------
.............................................................................................................................................ACTGAAAGGCAATGAAGGAGGAGT.....................................................................................2415.0041.001.00--------1.00-----------------------------------------------1.00----------1.00------------------------1.00---------------------------------------------------
............................................................................................................................................AACTGAAAGGCAATGAAGGAGGA.......................................................................................2315.005.00----1.00------1.00-------------------------1.00---1.00-------------------------1.00-----------------------------------------------------------------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGAGCAA...................................................................................2415.0014.00------------------------------------------------------------1.00--------1.00--------------------1.00-1.00--------------------------------------------1.00-------
.................................................................................................................................................................................TACTTTCTTTCCTGTCTTTCTAGA.................................................2415.005.00-----------2.00---------------------------------------------------1.00-------2.00-------------------------------------------------------------------------
..................................................................................................................................................................................................................GTACGAGTTGAAGCCACAGTCATT................2415.005.00--1.002.001.00-------------------1.00------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ACTGAAAGGCAATGAAGGA..........................................................................................1914.004.00-------------------------1.00-------2.00--1.00------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ACTGAAAGGCAATGAAGGAGGAGA.....................................................................................2414.0041.00---------1.00----------------------------------3.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................ACTGAAAGGCAATGAAGGAGGAT......................................................................................2314.0022.00-------1.001.001.00-------------------1.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGA.......................................................................................2014.004.00-2.001.00-------------------------------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................................AGAACCAGGAATTCTGTTT......................................................................................................................................193.000.00---------------------------------------1.00------------2.00--------------------------------------------------------------------------------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGAGT.....................................................................................2213.0010.00-----1.00-------------------------1.00-----------------------------------------------------------------1.00-----------------------------------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGAGCAG...................................................................................2413.0014.00-3.00-----------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CTGAAAGGCAATGAAGGAGGGGC.....................................................................................232.000.001.00--------------------------------------------------------------------------------------------------------------------------1.00---------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGAGCT....................................................................................2312.006.00----------------------------------------------1.00-----------------------------------------------------------------1.00--------------------------------
..............................................................................................................................................CTGAAAGGCAATGAAGGAGGA.......................................................................................2112.002.00-----1.00-----------------------------------------------------------------------------------------------------------------------1.00-------------------
............................................................................................................................................AACTGAAAGGCAATGAAGGA..........................................................................................2012.002.00-------------------2.00-----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................ACTTTCTTTCCTGTCTTTCTAGA.................................................2312.002.00--------------------------------------------------------2.00----------------------------------------------------------------------------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGAGCATT..................................................................................2512.0014.00------1.00------------------------------1.00-----------------------------------------------------------------------------------------------------------
................................................................................................................................................GAAAGGCAATGAAGGAGGAGC.....................................................................................2112.002.00--------------------------------------------------------------------------------------------------------1.00------1.00---------------------------------
.................................................................................................................................................................................TACTTTCTTTCCTGTCTTTC.....................................................2012.002.001.00----------------------------------------------1.00-------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................ACGAGTTGAAGCCACAGTCATT................2221.501.50--0.50--------------------0.500.50------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGAA......................................................................................2111.004.00------1.00------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ACTGAAAGGCAATGAAGGAGGAGCT....................................................................................2511.0039.00------------------------------------------------------1.00------------------------------------------------------------------------------------------
................................................................................................................................................................................................................TTGTACGAGTTGAAGCCACAGTCATTG...............2711.001.00-------------------------------------------------------------------------------------------------------------------------------------------1.00-----
.....................................................................................................................................................GCAATGAAGGAGGAGCGGG..................................................................................191.000.00-----------------------------------------------------------------------------------------------------------------------1.00-------------------------
............................................................................................................................................AACTGAAAGGCAATGAAGGAGGAGCA....................................................................................2611.001.00---------------------------------------------------------------------------1.00---------------------------------------------------------------------
.............................................................................................................................................ACTGAAAGGCAATGAAGGAGGAGTA....................................................................................2511.0041.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AACTGAAAGGCAATGAACAA..........................................................................................201.000.00-----------------------------------------------------------------------------------------------------------1.00-------------------------------------
........GAAGCAGAGGTAGGAGGGGCA.............................................................................................................................................................................................................................211.000.00-------------------------------------------------------------------------------------------------------------------------------------1.00-----------
..............................................................................................................................................CTGAAAGGCAATGAAGGAGGAGCACTGTCACAGTGTACTTTCTTTCCTGTCTTTCTAGA.................................................5911.001.00-------------------------------------------------------------------------------------------------------------------------------1.00-----------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGAGCAAAT.................................................................................2611.0014.00-----------------------------------1.00-------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGA........................................................................................191.000.00--------------------------------------------------------------------------------------------------1.00----------------------------------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGAGCTT...................................................................................2411.006.00-------------------------------------------1.00-----------------------------------------------------------------------------------------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGAGCAAT..................................................................................2511.0014.00-------------------------------------------------------------------1.00-----------------------------------------------------------------------------
.........................................................................................................................................................................................................AAGGAGCTTGTACGAGTTGAAGCCAC.......................2611.001.00------------------------------------------------------------------1.00------------------------------------------------------------------------------
................................................................................................................................................GAAAGGCAATGAAGGAGGAGCA....................................................................................2211.001.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGAAAGGCAATGAAGGAGGAGCAGAA.................................................................................2611.0014.00------------------------------1.00------------------------------------------------------------------------------------------------------------------
.............AGAGGTAGGAGGGTCATCCA.........................................................................................................................................................................................................................201.000.00------------------------------------------------------------------------------------------------------------------------1.00------------------------
..................................................................................................................................................................................ACTTTCTTTCCTGTCTTTCTAG..................................................2211.001.001.00------------------------------------------------------------------------------------------------------------------------------------------------
.....CAGGAAGCAGAGGTAGGACCC................................................................................................................................................................................................................................211.000.00-------------------------------------------1.00-----------------------------------------------------------------------------------------------------
...........................................................................................................................................AAACTGAAAGGCAATGAAGGAGGAGC.....................................................................................2611.001.00-------------------------------------------------------------------------------------------1.00-----------------------------------------------------
............................................................................................................................................AACTGAAAGGCAATGAAGGAGGAGCAT...................................................................................2711.001.001.00------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ACTGAAAGGCAATGAAGGAGGAAT.....................................................................................2411.0022.001.00------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TACTTTCTTTCCTGTCTT.......................................................1811.001.00------------------------------------------------------------------------------------------------1.00------------------------------------------------
................................................................................................................................................GAAAGGCAATGAAGGAGGAG......................................................................................2011.001.00-----------------------------------------------------------------------------1.00-------------------------------------------------------------------
..............................................................................................................................................CTGAAAGGCAATGAAGGAGGAGCAT...................................................................................2511.006.00---------------------------1.00---------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ACTGAAAGGCAATGAAGGAGGAACG....................................................................................2511.0022.00----------------------------------------------------------------1.00--------------------------------------------------------------------------------
.......................................................................................ACCCCACTGCAGAACCAAGG...............................................................................................................................................201.000.00---------------------------------------1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................AGGAGCTTGTACGAGTTGAAGCCACAGTC...................2911.001.00--------------------------------1.00----------------------------------------------------------------------------------------------------------------
........................................ATTCCTTGGATGTAAAGAGAATTT..........................................................................................................................................................................................2411.001.00------------------------1.00------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CTGAAAGGCAATGAAGGAGGAGCAAA..................................................................................2611.006.00----------------------------------------------------------1.00--------------------------------------------------------------------------------------
......AGGAAGCAGAGGTAGCGGG.................................................................................................................................................................................................................................191.000.00---------------------------------------1.00---------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................TGTACGAGTTGAAGCCACAG.....................2011.001.00------------------------1.00------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AACTGAAAGGCAATGAAGGAAG........................................................................................2211.002.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AACTGAAAGGCAATGAAGGAGGT.......................................................................................2311.006.00-------------------------------------------------------------------------------------1.00-----------------------------------------------------------
..................................................................................................................................................AAGGCAATGAAGGAGGAGCA....................................................................................2011.001.00----------------------------------------------------------------------------------------------------------1.00--------------------------------------
.............................................................................................................................................ACTGAAAGGCAATGAAGGACCCG......................................................................................2311.004.00-----------------------1.00-------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CTGAAAGGCAATGAAGGAGTAG......................................................................................221.000.00--------------------------------------------------------------------------------------------------------------------------------------1.00----------
.....CAGGAAGCAGAGGTAGATGT.................................................................................................................................................................................................................................201.000.00--------------------------------------------------------------------------------------------------------------------------------------------1.00----
...............................................................................................................................................TGAAAGGCAATGAAGGAGG........................................................................................1921.001.00-----------------------------------------1.00-------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................AGTCATTGAAAAGACAGAATC..2120.500.50----------------0.50--------------------------------------------------------------------------------------------------------------------------------
................................................................AAGGTTGGTCTGGGCTGCAT......................................................................................................................................................................2020.500.50------------------------0.50------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGCCACAGTCATTGAAAAGACA.......2220.500.50----------------------------------------------------------------------------------------------------------------------------------------------0.50--
...........................................................................................................................................................................................................................GAAGCCACAGTCATTGAAAAGA.........2220.500.50----------------0.50--------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGAAAGGCAATGAAGG...........................................................................................1630.330.33---0.33---------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CATTGAAAAGACAGAAT...1730.330.33-----------------------------------------------------------------------------------------------------------------------------------------------0.33-
.................................................................................................................................................................................TACTTTCTTTCCTGTC.........................................................1690.110.11------------------------------------------------------------------------------------------------------------------------------------------------0.11

Antisense strand
CTACACAGGAAGCAGAGGTAGGAGGGTCAGAGGTCAGTTTATTCCTTGGATGTAAAGAGAATTTAAGGTTGGTCTGGGCTGCATGAGACCCCACTGCAGAACCAGGAATTCTCTGGGGAGCTTCCGCAAGTTGTGCGTGAAACTGAAAGGCAATGAAGGAGGAGCACTGTCACAGTGTACTTTCTTTCCTGTCTTTCTAGAAAGGAGCTTGTACGAGTTGAAGCCACAGTCATTGAAAAGACAGAATCAT
................................................................................................................................................((((((((..((((((((.((((((...)))))).))))))))..)))))))).....................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
mjTestesWT4()
Testes Data. (testes)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR206941(GSM723282)
other. (brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR206942(GSM723283)
other. (brain)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
mjLiverWT3()
Liver Data. (liver)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)
mjTestesWT3()
Testes Data. (testes)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)
GSM510454(GSM510454)
newborn_rep10. (total RNA)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR306529(GSM750572)
19-24nt. (ago2 brain)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR206939(GSM723280)
other. (brain)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR206940(GSM723281)
other. (brain)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR095855BC8(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR038741(GSM527276)
small RNA-Seq. (brain)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR059765(GSM562827)
DN3_control. (thymus)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
GSM416732(GSM416732)
MEF. (cell line)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR037928(GSM510466)
e7p5_rep2. (embryo)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR038740(GSM527275)
small RNA-Seq. (dicer brain)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR306543(GSM750586)
19-24nt. (ago2 brain)
SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR037935(GSM510473)
293cand3. (cell line)
SRR073955(GSM629281)
total RNA. (blood)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
...............................................................................................................................................................................TGTACTTTCTTTCCTGTCTTTCTAGAAA............................................... 2811.001.00--------------------------------1.00----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................CACAGTCATTGAAAAGACC....... 191.000.00-------------------------------------------------------------------------------------------------------1.00-----------------------------------------
................................................................................................................................................................................GTACTTTCTTTCCTGTCTTTCTAGAAA............................................... 2711.001.00--------------------------------1.00----------------------------------------------------------------------------------------------------------------