ID: mmu-mir-6972
GENE: Cfb(13)
chr17:34994464-34994662-


(1)
AGO.mut 		(9)
BRAIN 		(1)
CELL-LINE 		(1)
EMBRYO 		(3)
KIDNEY 		(24)
LIVER 		(9)
OTHER 		(1)
OTHER.ip 		(6)
OTHER.mut 		(1)
PANCREAS 		(3)
PIWI.ip 		(1)
TDRD1.ip 		(18)
TESTES 		(3)
TOTAL-RNA

Sense strand
GTGGCCCTAGTCAAGCTCAAGAACAAGCTCAAGTATGGCCAGACTCTCAGGTGAGTGAGGCTGGGGCTCAGAGATGCTATGAAAGGTTGGGCTGGAGGCACAGGGCAGAACAGGTTGTCTGTGGCTCCTTACTGTACCTGTCTCCATAGGCCCATCTGTCTCCCCTGCACGGAGGGAACCACACGAGCCTTGAGGCTTC
............................................................................(((((..(((((((...((((.((((.(((((......))))))))).))))...))).)))).....)))))..................................................
........................................................................73..........................................................................149................................................
SizePerfect hitTotal NormPerfect NormmjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		mjLiverWT3()
Liver Data. (liver)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		mjLiverWT1()
Liver Data. (liver)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR553585(SRX182791)
source: Kidney. (Kidney)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		mjTestesWT1()
Testes Data. (testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		mjLiverWT2()
Liver Data. (liver)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR065049(SRR065049)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR037937(GSM510475)
293cand2. (cell line)		SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR065048(SRR065048)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		GSM640582(GSM640582)
small RNA in the liver with paternal control . (liver)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR077865(GSM637802)
18-30 nt small RNAs. (liver)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesWT2()
Testes Data. (testes)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR206942(GSM723283)
other. (brain)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		GSM640583(GSM640583)
small RNA in the liver with paternal Low prot. (liver)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM475281(GSM475281)
total RNA. (testes)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR073955(GSM629281)
total RNA. (blood)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR065050(SRR065050)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR073954(GSM629280)
total RNA. (blood)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
................................................................................................................................TTACTGTACCTGTCTCCATAGT.................................................221382.00129.00114.00-37.0029.0053.0028.0044.0014.0013.002.009.0018.006.002.002.001.002.001.00-------1.001.001.00----------------1.00--1.001.00----------1.00---------
................................................................................................................................TTACTGTACCTGTCTCCATAG..................................................211129.00129.0062.00-8.0017.00-4.004.0018.00--2.00-3.007.00-2.00-1.00-----------------------------------1.00---------------
.............................................................................TATGAAAGGTTGGGCTTCG.......................................................................................................1985.000.00-76.00-1.00----------------5.00---2.00---------1.00----------------------------------
.............................................................................TATGAAAGGTTGGGCTTCGG......................................................................................................2047.000.00-46.00-----------------------------------------------1.00-------------------
................................................................................................................................TTACTGTACCTGTCTCCATAGA.................................................22146.00129.0015.00-20.00----1.001.00-1.00--1.001.003.002.00-----1.00----------------------------------------------
.............................................................................TATGAAAGGTTGGGCTTC........................................................................................................1824.000.00-23.00----------------------1.00--------------------------------------------
...........................................................................................CTGGAGGCACAGGGCAGAACAG......................................................................................22115.0015.00-------14.00--------------1.00----------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATAA..................................................21114.004.0013.00--1.00-----------------------------------------------------------------
.............................................................................TATGAAAGGTTGGGCTTCC.......................................................................................................1910.000.00-10.00-------------------------------------------------------------------
.................................................................................................................................TACTGTACCTGTCTCCATAG..................................................2018.008.004.00-2.002.00-----------------------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATAC..................................................2118.004.008.00--------------------------------------------------------------------
.....................................................................................................................................................................TGCACGGAGGGAACCACACGAGCC..........2417.007.00--------7.00------------------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATAGAAA...............................................2417.00129.00---7.00-----------------------------------------------------------------
............................................................................CTATGAAAGGTTGGGCTTCGG......................................................................................................217.000.00-6.00---------------------------------1.00---------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATAAT.................................................2217.004.00----7.00----------------------------------------------------------------
..........................................................................................GCTGGAGGCACAGGGCAGAACAG......................................................................................2316.006.00-----------------1.00-1.00-----2.00-------------------1.00------1.00----------------
................................................................................................................................TTACTGTACCTGTCTCCATAGTA................................................2316.00129.004.00-2.00------------------------------------------------------------------
..........................................................................................GCTGGAGGCACAGGGCAGAACA.......................................................................................2216.006.00-----1.00--------2.00-------1.00----------------1.00------------------------1.00----
............................................................................CTATGAAAGGTTGGGCTTC........................................................................................................195.000.00------------------5.00--------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATAGAA................................................2315.00129.00---5.00-----------------------------------------------------------------
.............................................................................TATGAAAGGTTGGGCTTCA.......................................................................................................195.000.00-5.00-------------------------------------------------------------------
.....................................................................................................................................................................TGCACGGAGGGAACCACACG..............2015.005.00--------5.00------------------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATAGTT................................................2314.00129.00---3.00-----------------------------------------------------------1.00-----
................................................................................................................................TTACTGTACCTGTCTCCATAGAT................................................2314.00129.003.00----1.00---------------------------------------------------------------
................................GTATGGCCAGACTCTCAG.....................................................................................................................................................1814.004.00--3.00---------1.00--------------------------------------------------------
..................................................................................................................................ACTGTACCTGTCTCCATAGT.................................................2014.001.00---4.00-----------------------------------------------------------------
.............................................................................TATGAAAGGTTGGGCTTCGC......................................................................................................204.000.00-4.00-------------------------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATA...................................................2014.004.00--3.00--1.00---------------------------------------------------------------
..........................................................................................GCTGGAGGCACAGGGCAGAACAGG.....................................................................................2414.004.00--------------1.00--1.00-1.00--------------------------------------1.00----------
.............................................................................TATGAAAGGTTGGGCTTCGA......................................................................................................204.000.00-4.00-------------------------------------------------------------------
..............................................................................ATGAAAGGTTGGGCTTCG.......................................................................................................1873.430.14-2.00------------------0.43---0.29---------0.71----------------------------------
.................................................................................................................................TACTGTACCTGTCTCCATAGT.................................................2113.008.00--3.00------------------------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATAGTAA...............................................2413.00129.00--------------------------2.00----------------1.00-------------------------
................................................................................................................................TTACTGTACCTGTCTCCATAGTTT...............................................2413.00129.003.00--------------------------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCAT....................................................1913.003.002.00--------1.00-----------------------------------------------------------
.........................................................................................................................................................ATCTGTCTCCCCTGCACGG...........................1913.003.00---------3.00-----------------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATAT..................................................2112.004.00----------1.00-----------------1.00----------------------------------------
......................................................................................................................................................................GCACGGAGGGAACCACACGAGCCT.........2412.002.00------------------------------2.00--------------------------------------
.............................................................................TATGAAAGGTTGGGCTTTGG......................................................................................................202.000.00-2.00-------------------------------------------------------------------
.......TAGTCAAGCTCAAGAACAAG............................................................................................................................................................................2012.002.00-----1.00---1.00-----------------------------------------------------------
.......................CAAGCTCAAGTATGGCCAGACTCTCAG.....................................................................................................................................................2712.002.00--------------1.00----1.00-------------------------------------------------
............................................................................CTATGAAAGGTTGGGCTTCGC......................................................................................................212.000.00-2.00-------------------------------------------------------------------
......................................................................................................................................................................GCACGGAGGGAACCACACGAG............2112.002.00---------2.00-----------------------------------------------------------
.............................CAAGTATGGCCAGACTCTCAG.....................................................................................................................................................2112.002.00-----1.00----------1.00----------------------------------------------------
...........................................................................................................................................................................GAGGGAACCACACGAGCCTTGAGG....2412.002.00---------2.00-----------------------------------------------------------
.............................................................................TATGAAAGGTTGGGCTTTG.......................................................................................................192.000.00-2.00-------------------------------------------------------------------
.........GTCAAGCTCAAGAACAAG............................................................................................................................................................................1812.002.00-----2.00---------------------------------------------------------------
..........................................................................................GCTGGAGGCACAGGGCAGAACAGGT....................................................................................2512.002.00--1.00----------------1.00-------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATTTT.................................................2212.003.00---2.00-----------------------------------------------------------------
............................................................................CTATGAAAGGTTGGGCTTCG.......................................................................................................202.000.00-2.00-------------------------------------------------------------------
.................................TATGGCCAGACTCTCAG.....................................................................................................................................................1712.002.00-----1.00------1.00--------------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATATA.................................................2212.004.001.00---------------1.00----------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATAGC.................................................2212.00129.00-----------------------------------------1.00--------1.00------------------
.................CAAGAACAAGCTCAAGTATGGCCAGACTC.........................................................................................................................................................2912.002.00---------2.00-----------------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATGG..................................................2111.003.001.00--------------------------------------------------------------------
................................GTATGGCCAGACTCTCAGGCCC.................................................................................................................................................221.000.00---------------------------1.00-----------------------------------------
.......................................................................................................................................................................CACGGAGGGAACCACACGAGCCTTGAGGCT..3011.001.00-----1.00---------------------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATAGGA................................................2311.001.001.00--------------------------------------------------------------------
.............................................................................................................................................................GTCTCCCCTGCACGGAGGGAA.....................2111.001.00---------1.00-----------------------------------------------------------
.........................AGCTCAAGTATGGCCAGACTCT........................................................................................................................................................2211.001.00---------1.00-----------------------------------------------------------
..........TCAAGCTCAAGAACAAGCTC.........................................................................................................................................................................2011.001.00----------------------------1.00----------------------------------------
.......TAGTCAAGCTCAAGAACAAGCTCAAGTATGG.................................................................................................................................................................3111.001.00-----1.00---------------------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATCGA.................................................2211.003.00----------------1.00----------------------------------------------------
..................................................GTGAGTGAGGCTGGGGCTCAGAGATGCTATGAAAGGTTGGGCTGGAGGCACAGGGCAGAACAGGTTGTCTGTGGCTCCT......................................................................7911.001.00-----------------------1.00---------------------------------------------
......................ACAAGCTCAAGTATGGCCAGACTCTCA......................................................................................................................................................2711.001.00---------1.00-----------------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCTAT....................................................191.000.001.00--------------------------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATAGATC...............................................2411.00129.00---1.00-----------------------------------------------------------------
...................AGAACAAGCTCAAGTATGGC................................................................................................................................................................2011.001.00----------1.00----------------------------------------------------------
...............................AGTATGGCCAGACTCTCAG.....................................................................................................................................................1911.001.00-------------------------------1.00-------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATCGT.................................................2211.003.001.00--------------------------------------------------------------------
.......TAGTCAAGCTCAAGAACAAGCTCA........................................................................................................................................................................2411.001.00---------1.00-----------------------------------------------------------
..........................................................................................GCTGGAGGCACAGGGCAGAACAGGTT...................................................................................2611.001.00----------------------1.00----------------------------------------------
.............................................................................TATGAAAGGTTGGGCTTGGG......................................................................................................201.000.00-1.00-------------------------------------------------------------------
.......TAGTCAAGCTCAAGAACAA.............................................................................................................................................................................1911.001.00----------1.00----------------------------------------------------------
.................................................................................................................................TACTGTACCTGTCTCCATAGTT................................................2211.008.00---1.00-----------------------------------------------------------------
..................................................................................................................................ACTGTACCTGTCTCCATAG..................................................1911.001.00---1.00-----------------------------------------------------------------
..........................GCTCAAGTATGGCCAGACTCTC.......................................................................................................................................................2211.001.00-----1.00---------------------------------------------------------------
...................................................................................................ACAGGGCAGAACAGGTTGTCTG..............................................................................2211.001.00----------------------------1.00----------------------------------------
..........TCAAGCTCAAGAACAAGCTCAAGTATGGCC...............................................................................................................................................................3011.001.00-----1.00---------------------------------------------------------------
...................................................................................................................................................................CCTGCACGGAGGGAACCACACGAGCCTTGAG.....3111.001.00---------1.00-----------------------------------------------------------
..........................................................................................GCTGGAGGCACAGGGCAGATT........................................................................................211.000.00-----------------1.00---------------------------------------------------
...........................................................................................................................................................................GAGGGAACCACACGAGCCTTGAGGCT..2611.001.00---------1.00-----------------------------------------------------------
..........................................................................................................................................................TCTGTCTCCCCTGCACGGA..........................1911.001.00---------------------------1.00-----------------------------------------
.....................AACAAGCTCAAGTATGGCCAGACT..........................................................................................................................................................2411.001.00----------1.00----------------------------------------------------------
.............................................................................TATGAAAGGTTGGGCTT.........................................................................................................171.000.00-1.00-------------------------------------------------------------------
................................................................................GAAAGGTTGGGCTGGAGGCACAGGGCAGAACAGGTTGTCTGTGGCTCCTTACTGTACCTGTCTCCCTAG..................................................691.000.00-----------------------1.00---------------------------------------------
..........................................................................................GCTGGAGGCACAGGGCAGAACAGGA....................................................................................2511.004.00--------------------------------------1.00------------------------------
..........................................................................................GCTGGAGGCACAGGGCAGAACAGA.....................................................................................2411.006.00--------------1.00------------------------------------------------------
........................................................................................GGGCTGGAGGCACAGCTCG............................................................................................191.000.00------------------------------------------------------------1.00--------
..........................................................................TGCTATGAAAGGTTGTTA...........................................................................................................181.000.00--------------------------------1.00------------------------------------
..................................................................................................................................ACTGTACCTGTCTCCATAGC.................................................2011.001.00-------------1.00-------------------------------------------------------
............................TCAAGTATGGCCAGACTCT........................................................................................................................................................1911.001.00----------1.00----------------------------------------------------------
...........................................................................GCTATGAAAGGTTGGGCTGGAGGCAC..................................................................................................2611.001.00----------------------------------------------1.00----------------------
...........CAAGCTCAAGAACAAGCTCAAGTATGG.................................................................................................................................................................2711.001.00-----1.00---------------------------------------------------------------
.................................................................................................................................TACTGTACCTGTCTCCATTG..................................................201.000.001.00--------------------------------------------------------------------
.......................CAAGCTCAAGTATGGCCAGACTCTCA......................................................................................................................................................2611.001.00-----------------1.00---------------------------------------------------
............................................................................................................................................................TGTCTCCCCTGCACGGAGGG.......................2011.001.00----------1.00----------------------------------------------------------
.........................AGCTCAAGTATGGCCAGACTCTCAGGTGAGTGAGGCTGGGGCTCAGAGATGCTATGAAAGGTTGGGCTGGAGGCACAGGGCAGAAA........................................................................................861.000.00-----------------------1.00---------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATAGG.................................................2211.001.00-------1.00-------------------------------------------------------------
...................................................................................................................................................AGGCCCATCTGTCTCCCCTGCACGG...........................2511.001.00-----1.00---------------------------------------------------------------
.......................................................................................................................................................................CACGGAGGGAACCACACGAGC...........2111.001.00------------------------------1.00--------------------------------------
.............................................................................TATGAAAGGTTGGGCCTCA.......................................................................................................191.000.00------------------------------------1.00--------------------------------
......................................................................................................................................................................GCACGGAGGGAACCACACGAGCCTTGAGGCT..3111.001.00-----1.00---------------------------------------------------------------
.....................................................................................................................................................................TGCACGGAGGGAACCACACGAGCCTTG.......2711.001.00----------1.00----------------------------------------------------------
..........................................................................................GCTGGAGGCACAGGGCAGAACAC......................................................................................2311.006.00-------------------1.00-------------------------------------------------
.....................AACAAGCTCAAGTATGGCCAGACTCTC.......................................................................................................................................................2711.001.00---------------------1.00-----------------------------------------------
.........GTCAAGCTCAAGAACAAGCTCAAGTATGG.................................................................................................................................................................2911.001.00-----1.00---------------------------------------------------------------
..........................................................................................GCTGGAGGCACAGGGCAGAACAGT.....................................................................................2411.006.00-------------------1.00-------------------------------------------------
..................................................................................................................................................................................CCACACGAGCCTTGAGGCTTC2111.001.00-----1.00---------------------------------------------------------------
.............................CAAGTATGGCCAGACTCTC.......................................................................................................................................................1911.001.00-----1.00---------------------------------------------------------------
................................................................................GAAAGGTTGGGCTGGAGGCACAGGGCAGAACAGGTTGTCTGTGGCTCCTTACTGTACCTGTCTCCATAG..................................................6911.001.00-----------------------1.00---------------------------------------------
..........................GCTCAAGTATGGCCAGACTCTCAGGC...................................................................................................................................................261.000.00-----1.00---------------------------------------------------------------
....CCCTAGTCAAGCTCAAGAACAA.............................................................................................................................................................................2211.001.00---------------1.00-----------------------------------------------------
..............................................................................................................................................................TCTCCCCTGCACGGAGGGAAC....................2111.001.00---------1.00-----------------------------------------------------------
....................................................................................................................................................................CTGCACGGAGGGAACCACACG..............2111.001.00-------------------------------1.00-------------------------------------
.....................................................................................................................................................................TGCACGGAGGGAACCACACGAG............2211.001.00-----1.00---------------------------------------------------------------
.............................................................................TATGAAAGGTTGGGCTTGG.......................................................................................................191.000.00-1.00-------------------------------------------------------------------
..............................................................................ATGAAAGGTTGGGCTTCGG......................................................................................................1970.860.14-0.86-------------------------------------------------------------------
..............................................................................ATGAAAGGTTGGGCTTCGA......................................................................................................1970.710.14-0.43------------------0.29------------------------------------------------
..................................ATGGCCAGACTCTCAG.....................................................................................................................................................1630.670.67------0.33-----0.33--------------------------------------------------------
.........................................................................................................................................................................CGGAGGGAACCACACGAG............1820.500.50-----0.50---------------------------------------------------------------
..........TCAAGCTCAAGAACAAG............................................................................................................................................................................1720.500.50-----0.50---------------------------------------------------------------
..............................................................................ATGAAAGGTTGGGCTTCA.......................................................................................................1870.290.14-0.29-------------------------------------------------------------------
..............................................................................ATGAAAGGTTGGGCT..........................................................................................................1570.140.14--------------------------------------------------------------------0.14
..............................................................................ATGAAAGGTTGGGCTTA........................................................................................................1770.140.14-0.14-------------------------------------------------------------------
..............................................................................ATGAAAGGTTGGGCTTGGG......................................................................................................1970.140.14-0.14-------------------------------------------------------------------
..............................................................................ATGAAAGGTTGGGCTTC........................................................................................................1770.140.14-0.14-------------------------------------------------------------------
..............................................................................ATGAAAGGTTGGGCTTTG.......................................................................................................1870.140.14-0.14-------------------------------------------------------------------

Antisense strand
GTGGCCCTAGTCAAGCTCAAGAACAAGCTCAAGTATGGCCAGACTCTCAGGTGAGTGAGGCTGGGGCTCAGAGATGCTATGAAAGGTTGGGCTGGAGGCACAGGGCAGAACAGGTTGTCTGTGGCTCCTTACTGTACCTGTCTCCATAGGCCCATCTGTCTCCCCTGCACGGAGGGAACCACACGAGCCTTGAGGCTTC
............................................................................(((((..(((((((...((((.((((.(((((......))))))))).))))...))).)))).....)))))..................................................
........................................................................73..........................................................................149................................................
SizePerfect hitTotal NormPerfect NormmjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		mjLiverWT3()
Liver Data. (liver)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		mjLiverWT1()
Liver Data. (liver)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR553585(SRX182791)
source: Kidney. (Kidney)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		mjTestesWT1()
Testes Data. (testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		mjLiverWT2()
Liver Data. (liver)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR065049(SRR065049)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR037937(GSM510475)
293cand2. (cell line)		SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR065048(SRR065048)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		GSM640582(GSM640582)
small RNA in the liver with paternal control . (liver)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR077865(GSM637802)
18-30 nt small RNAs. (liver)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesWT2()
Testes Data. (testes)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR206942(GSM723283)
other. (brain)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		GSM640583(GSM640583)
small RNA in the liver with paternal Low prot. (liver)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM475281(GSM475281)
total RNA. (testes)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR073955(GSM629281)
total RNA. (blood)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR065050(SRR065050)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR073954(GSM629280)
total RNA. (blood)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
.........................................................................................................................TGGCTCCTTACTGTACCTGTCTCCATAT.................................................. 282.000.00---------------------1.00--------------------1.00--------------------------
........................................................GAGGCTGGGGCTCAGAGATGCTATGAA.................................................................................................................... 2711.001.00-------------------------------------------------------1.00-------------
...............................................................................................................AGGTTGTCTGTGGCTCCTTACTGT................................................................ 2411.001.00---------------------------------------------------------1.00-----------
.....................................................................................................................................................GCCCATCTGTCTCCCCTGC............................... 1911.001.00-------------------------------------------------------------------1.00-
........................................................................................................................GTGGCTCCTTACTGTACCTGTCTCCATAT.................................................. 291.000.00---------------------------------------------------1.00-----------------
...GCCCTAGTCAAGCTCGGTA................................................................................................................................................................................. 191.000.00-----------------------------1.00---------------------------------------
...GCCCTAGTCAAGCTCG.................................................................................................................................................................................... 161.000.00-----------------------------1.00---------------------------------------
.........................................................AGGCTGGGGCTCAGAGATGCTATGAA.................................................................................................................... 2611.001.00----------------------------------------1.00----------------------------
...GCCCTAGTCAAGCTCATCC................................................................................................................................................................................. 191.000.00-----------------------------1.00---------------------------------------
......................................................................................TTGGGCTGGAGGCACAGGGCAGAAAA....................................................................................... 261.000.00---------------------------------1.00-----------------------------------
........................................................................................................................GTGGCTCCTTACTGTACCTGTCTCCA..................................................... 2611.001.00------------------------------------------------------------------1.00--
........................................................................GATGCTATGAAAGGTTGGGCTGGAGGCACA................................................................................................. 3011.001.00---------------------------------1.00-----------------------------------
.............................................................TGGGGCTCAGAGATGCTATG...................................................................................................................... 2011.001.00-----1.00---------------------------------------------------------------
............................................................................CTATGAAAGGTTGGGCTA......................................................................................................... 181.000.00-1.00-------------------------------------------------------------------
...GCCCTAGTCAAGCTCGATT................................................................................................................................................................................. 191.000.00--------------------------------1.00------------------------------------
........................................................................................................................................CCTGTCTCCATAGGCCCATCT.......................................... 2111.001.00-------------------------------------------------------------1.00-------
...GCCCTAGTCAAGCTCGG................................................................................................................................................................................... 171.000.00--------------------------------------------------------------1.00------
..................................................................CTCAGAGATGCTATGAAA................................................................................................................... 1811.001.00-------------------------------------1.00-------------------------------
......................................................................................................................................TACCTGTCTCCATAGGCCCATCTGTC....................................... 2611.001.00------------------------------------------------------1.00--------------
............................................................................CTATGAAAGGTTGGGCTAA........................................................................................................ 191.000.00------------------1.00--------------------------------------------------
................................................................................................................................TTACTGTACCTGTCTCCATAGGCCCATCTGT........................................ 3111.001.00-----1.00---------------------------------------------------------------
....................................................................................................................................................GGCCCATCTGTCTCCCCTGCACGGAG......................... 2611.001.00---------------------1.00-----------------------------------------------
..............................................................................................................................................................................GGAACCACACGAGCCTCG....... 181.000.00-----------------------------------------------------------------1.00---
............................TCAAGTATGGCCAGACTCTCAGGTGAAA............................................................................................................................................... 281.000.00--------------------------------------------------------1.00------------
.......................CAAGCTCAAGTATGGCCAGACTCTCA...................................................................................................................................................... 2611.001.00---------------------1.00-----------------------------------------------