ID: mmu-mir-6959
GENE: Sbf1(11)
chr15:89136039-89136475-


(3)
AGO1.ip 		(13)
AGO2.ip 		(2)
AGO3.ip 		(7)
B-CELL 		(39)
BRAIN 		(4)
CELL-LINE 		(3)
DCR.mut 		(1)
DGCR8.mut 		(7)
EMBRYO 		(8)
ESC 		(6)
FIBROBLAST 		(2)
HEART 		(3)
KIDNEY 		(9)
LIVER 		(1)
LUNG 		(4)
LYMPH 		(18)
OTHER 		(11)
OTHER.mut 		(3)
PIWI.ip 		(2)
PIWI.mut 		(5)
SKIN 		(9)
SPLEEN 		(28)
TESTES 		(2)
THYMUS 		(1)
TRIM32.ip

Sense strand
ACCTTGCCTTCCCACCCCCTACAACATCTGCTTCCTCCCTGAAAATGCAGGTGGGGGTCACTGCTGCTCTGGGATAGAGATTGCATTGCCTCTCATGGCTAAGCTGATGGTGTCACAGCCCTACCTCCAAGCTGACCTCAGGCTTCTCTAGCCTGGGAGCAAAGGAGCTATACAAACAGTTAGGTGTGGTGACGGTACCAGTCAGTACAGTGAACCGATCAAGGGGCTCTGAACAGGAGCTGTCTGTTCAACACTTGTAGAACTCACTGGGCTAAGAAGCACTGTTGGGAGAGGCAAAGGGGGGTGGCAGAGGTGCCTGGGAAACCTGTGTCGGGCTGTGAGTGTTTTCTGGGACCTGATACTCACTGCACCGACCTGCTCTCCCAGGACAAGGAGCTCCGTGCTGTCTTTCTGCGGCTCTTTGCTCAGCTCCTGCA
............................................................................................................................................................................................................................................................................................................................((((((.......(((((((.(((((((((...........))))))))).)).)))))......))))))..................................................
........................................................................................................................................................................................................................................................................................................................313.......................................................................387................................................
SizePerfect hitTotal NormPerfect NormmjLiverWT2()
Liver Data. (liver)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR553582(SRX182788)
source: Brain. (Brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		mjLiverWT1()
Liver Data. (liver)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		mjLiverWT3()
Liver Data. (liver)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR206942(GSM723283)
other. (brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR206941(GSM723282)
other. (brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR206939(GSM723280)
other. (brain)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR206940(GSM723281)
other. (brain)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR037902(GSM510438)
testes_rep3. (testes)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR037906(GSM510442)
brain_rep3. (brain)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		mjTestesWT1()
Testes Data. (testes)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR073955(GSM629281)
total RNA. (blood)		SRR306543(GSM750586)
19-24nt. (ago2 brain)		GSM361415(GSM361415)
WholeCerebellum_P6_p53--_Ink4c--_rep4. (brain)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		GSM361398(GSM361398)
CGNP_P6_p53--_Ink4c--_rep1. (brain)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR014229(GSM319953)
10 dpp MILI. (mili testes)		GSM361407(GSM361407)
CGNP_P6_Ptc+-_Ink4c--_rep5. (brain)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR346415(SRX098256)
source: Testis. (Testes)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR306538(GSM750581)
19-24nt. (ago2 brain)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		mjTestesWT2()
Testes Data. (testes)		GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		GSM317184(GSM317184)
TRIM32 IP small RNAs from mouse brain. (trim32 brain)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR525241(SRA056111/SRX170317)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR553586(SRX182792)
source: Testis. (testes)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGT................................................................................................241146.0057.0023.0015.0011.009.00-5.00--4.005.003.003.00-5.003.001.001.00--1.00-5.004.00-3.001.00---3.002.002.00-2.002.001.004.001.00---1.001.00----1.00-----2.002.00---1.00----1.00--1.00---1.001.002.00--1.00----1.00----1.00---2.00----2.00----------------1.00--------------1.00-------1.00---------1.00--1.00--1.00-
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGT..................................................................................................221103.00103.0031.003.003.005.00-2.00--5.006.00-2.002.00-2.003.003.00----1.00-5.00-------2.00-----1.002.00--1.00--1.00---1.00---1.00-----1.001.00--------1.00-1.001.00------1.00-----1.00--1.00-----2.00-2.00--1.00--1.001.00----------1.00------1.00--1.00-1.00----------1.00---1.00-----------
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTCCCAGT.................................................231100.007.00---2.0023.006.0014.0019.00---1.00--2.001.00--6.001.00-----2.00-3.00-1.00-1.00-1.00----1.00-1.001.001.00-1.001.001.00--1.002.00--------------1.00-1.00--------1.00--1.001.00---------------1.00--------------------------------------------1.00----------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGA................................................................................................24175.0075.0011.0016.002.001.00----2.00-10.001.003.00--1.00-11.00----2.00------1.00--1.00--2.00----1.00-------------------------1.00------2.002.00---1.00-------------------1.001.00------------------------1.00--------1.00------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTG.................................................................................................23157.0057.00-4.005.004.00-1.00--6.002.00-2.00-7.002.00----1.00---1.002.00---1.00-1.00-2.00-1.00----------1.00---1.00-1.00---1.00-------1.00---1.00--------1.00----1.00----------2.00-----------1.00---1.00-----1.001.00---------------------1.00--------------
............................................................................................................................................................................................................................................................................................................................CTGGGAAACCTGTGTCGGGCTGT..................................................................................................23114.0014.00--1.001.00--------8.00-----------------1.00----1.00---------------------------------------------------------------------------------------------------1.00---------------1.00
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTG...................................................................................................21112.0012.00---1.00-1.00-----1.00--1.001.001.00--------------------1.00-----------1.00-----1.00--------------------------1.00---1.00--------------------------------------------------------1.00--------
..............................................................................................................................................................................................................................................................................................................................................................................TGCACCGACCTGCTCTCCCAGT.................................................2212.000.00--1.00---4.001.00----------2.00--------2.00---------------1.00--------------------------------------------------------------------------------------------------------1.00---
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTCCCAGA.................................................23110.007.00---1.00--2.001.00----2.00-----1.00------------------------2.00--1.00---------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGAGTGTTTTCTGGGACCTGATACTCACTGCACCGACCTGCTCTCCCAGT.................................................7118.001.00--------------------8.00-----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGTAGA.............................................................................................2718.0057.008.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGTT...............................................................................................2517.0057.00-2.00-1.00----1.001.00-1.00-------------------------------------------1.00------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTCCCAG..................................................2217.007.00------2.00-----------1.00-----1.00--------1.00------------1.00------------------1.00--------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................CCTGGGAAACCTGTGTCGGGCTGT..................................................................................................2414.004.00-------------------2.00--------1.00----------------------------------------------------------------------------------------------------1.00----------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGA..................................................................................................2214.0012.00---1.00-1.00-------------------------------1.00------1.00-----------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................CTGGGAAACCTGTGTCGGGCTGTGT................................................................................................2514.002.00---------1.00---------2.00-----1.00------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCT....................................................................................................2014.004.00-----2.00--1.00-------------------------------------------------------------------------1.00---------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTCCCAGC.................................................2314.007.00--1.00----------------------1.00--------------1.00---------------------------------------------1.00-----------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTCCCAGTAT...............................................2514.007.00---------------------------------------4.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGC................................................................................................2413.0057.00----------1.001.00-----------------------------------1.00--------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................CTGGGAAACCTGTGTCGGGCTGTAA................................................................................................2513.0014.00-2.00--------------------------------------------------------------------------------------------------------1.00---------------------------------------------
........................................................................................................................................................................................................................................................................................................................................TGTCGGGCTGTGAGTGTTTTCT.......................................................................................2213.003.00---------1.00------------------------1.00-------------------------------------------------------------1.00-------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGAA...............................................................................................2513.0075.00----------------3.00---------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGG.......................................................................................................1713.003.00-----------1.00---------2.00----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTCCCAGTT................................................2413.007.00--1.00------------1.00----------------------------------------------1.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTCCCAGTAG...............................................2512.007.00-------------------------------------------------------------2.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTTTGA................................................................................................2412.004.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCAGT..................................................................................................2212.002.002.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................GGGAAACCTGTGTCGGGCTGTG.................................................................................................2212.002.00---------------1.00----------1.00-----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................CTGGGAAACCTGTGTCGGGC.....................................................................................................2012.002.00-----------------------1.00-----------------------------------------------------------1.00--------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................CCTGGGAAACCTGTGTCGGGCTGTGA................................................................................................2612.002.00-------------------2.00------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................CAAGGAGCTCCGTGCTGTCTTTCTGCGGCT..................3012.002.00------------------------------------------------------------------------------------------2.00-------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGTTT..............................................................................................2612.0057.00------------------------------------------------------1.00----------------------------------------------------------------------------1.00--------------------
..............................................................................................................................................................................................................................................................................................................................GGGAAACCTGTGTCGGGCTGTGT................................................................................................2312.002.00--------------------------2.00-----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................CTGGGAAACCTGTGTCGGGCTGTG.................................................................................................2412.002.00--------------------------------------------------------------------1.00----------------------------------------------------1.00------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGAAA................................................................................................2412.0012.00----------------2.00---------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTCCCAGTAAT..............................................2612.007.00---------------------------------------------------------------------2.00----------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTT.................................................................................................2312.00103.00------------------------------------------------------------------------------------1.00--1.00----------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGG......................................................................................................1812.002.00---------------1.00---------------------------------------------------------------------------------------------------------------------------1.00------------
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTCCCAGTAA...............................................2512.007.00-----------------------------------------------1.00---------------------------1.00----------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTAACA...................................................212.000.00---------2.00----------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTAT................................................................................................2412.00103.00-----2.00--------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGC.....................................................................................................1912.002.00---------------1.00-----------------------------------------------------------------------------------------------------1.00----------------------------------
............................................................................................................................................................................................................GTACAGTGAACCGATCACTTA....................................................................................................................................................................................................................212.000.00---------------------------------------------------------1.00---------------------------------------------------------------------1.00------------------------
............................................................................................................................................................................................................GTACAGTGAACCGATCACTTT....................................................................................................................................................................................................................212.000.00----------------------------------------------------------------------------------------1.00--1.00------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................CTGGGAAACCTGTGTCGGGCTG...................................................................................................2212.002.00---------------------------------------------------------------------------------1.00----------------------------------1.00-----------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTA.................................................................................................2311.00103.00----------------------------------------1.00---------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................AACACTTGTAGAACTCACTGGGCTAAGAAG..............................................................................................................................................................3011.001.00-----------------------------------------------------------------------------------------------------------------------1.00--------------------------------
....................ACAACATCTGCTTCCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00----------------------------1.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GTGAACCGATCAAGGGG...................................................................................................................................................................................................................1711.001.00-------------------------------------------------------------------------------1.00------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTA...................................................................................................2111.004.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................CTGGGAAACCTGTGTCGGGCTGTGA................................................................................................2511.001.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGTATT.............................................................................................2711.0057.00-------------------------------------------------------------------------------------------------------------1.00------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTTA................................................................................................2411.00103.00--------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTTTGT................................................................................................2411.004.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................TGTCGGGCTGTGAGTGTTTTC........................................................................................2111.001.00----------------1.00---------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................TGTCGGGCTGTGAGTGTTTTCTGG.....................................................................................2411.001.00-----------------------------------------------------------------------------1.00--------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTAA................................................................................................2411.00103.00--------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................CAACACTTGTAGAACTCACTGGGCTAAGAAGC.............................................................................................................................................................3211.001.00----------------------------------------------------------------------------------------------------------------------------------------------1.00---------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTTT................................................................................................2411.00103.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGCGT................................................................................................2411.0012.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGATT..............................................................................................2611.0075.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................CCTGGGAAACCTGTGTCGGG......................................................................................................2011.001.00---------------------------------------------------1.00----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................AGGGGGGTGGCAGAGCCT..........................................................................................................................181.000.00------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCATAA.................................................................................................2311.002.00----------------------------------------------------------------------------------------------------------------------1.00---------------------------------
.........................................AAAATGCAGGTGGGGAAGA.........................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
.....................CAACATCTGCTTCCTCCCTG............................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................GTACAGTGAACCGATCACTGA....................................................................................................................................................................................................................211.000.00-------------------------------------------------------------------------------------------1.00------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................AGGACAAGGAGCTCCGTGCT................................2011.001.00----------------------------1.00---------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTT...................................................................................................2111.004.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
.............................................TGCAGGTGGGGGTCACCA......................................................................................................................................................................................................................................................................................................................................................................................181.000.00----------------------------------------------------------------------------------------------------1.00---------------------------------------------------
............................................................................................................................................................................................................................................................................................................................CTGGGAAACCTGTGTCGTGC.....................................................................................................201.000.00---------------------------------------------------1.00----------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTCTTTCTGCGGCTCTTT..............2111.001.00--------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTCCCAAT.................................................231.000.00-----------------------------------------------------1.00--------------------------------------------------------------------------------------------------
....................ACAACATCTGCTTCCTCCCTTAT..........................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................GTACAGTGAACCGATCACTTG....................................................................................................................................................................................................................211.000.00------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................AGAACTCACTGGGCTAAGAAGCACT..........................................................................................................................................................2511.001.00-------------------------------------------------------------------------------------------------1.00------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................CTGGGAAACCTGTGTCGGGCTAT..................................................................................................231.000.00--------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................ATACTCACTGCACCGACCTGCTCTCCCAG..................................................2911.001.00-----------------------------------------------------------1.00--------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................TACTCACTGCACCGACCTTCT.........................................................211.000.00----------------------------------------------------1.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................AACCTGTGTCGGGCTGTGT................................................................................................191.000.00-------------------------------------------------------------------------------------------------1.00------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCCGTG.................................................................................................2311.002.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGTCTTTCTGCGGCTC.................2011.001.00-------------------------------------------------------------------------------------------------------1.00------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGAGTGTTTTCTGGGACCTGATACTCACTGCACCGACCTGCTCTCCCAG..................................................7011.001.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGTAGT.............................................................................................2711.0057.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................CTGGGAAACCTGTGTCGGG......................................................................................................1911.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.................CCTACAACATCTGCTTCCT.................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00------------------------------------------------------------------------------------------------------------------------------------------1.00-------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGTTA..............................................................................................2611.0057.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGGGTT...............................................................................................2511.0012.00--------------------------------------------------------------------------------------------------------------------------------------------------1.00-----
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTCCCATT.................................................231.000.00------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................CTGGGAAACCTGTGTCGGGCAAT..................................................................................................2311.002.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTAGA...............................................................................................2511.00103.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGCGGCTCTTTGCTCAGCTCCTG..2611.001.00--------------------------------------------------------------------------------------------------------------------------------1.00-----------------------
..........................................................................................................................................................................................................................................................................................................................................TCGGGCTGTGAGTGTTTTTT.......................................................................................201.000.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTTGGT................................................................................................2411.004.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGGGA................................................................................................2411.0012.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................AGGGGGGTGGCAGAGGTACTG.......................................................................................................................211.000.00-----------------------------------------------------------------------------------1.00--------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTCCAAGT.................................................231.000.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGAAA..............................................................................................2611.0075.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTCCCATA.................................................231.000.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGTTGA.............................................................................................2711.0057.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................CCTGATACTCACTGCACCGAC..............................................................2111.001.00------------------------------1.00-------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................TTGGGAGAGGCAAAGAATT......................................................................................................................................191.000.00---------------1.00----------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGAAG................................................................................................2411.0012.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................GAGCTATACAAACAGTTAGGTGTGGTGACT...................................................................................................................................................................................................................................................301.000.00--------------------------------------------------------------------------------------------------------------------------1.00-----------------------------
.......................................................................................................................................................................................................................................................................................................................................................................TACTCACTGCACCGACCTGCTTTT......................................................241.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTAG................................................................................................2411.00103.00-------------------------1.00------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................GTGTCGGGCTGTGAGTG.............................................................................................1711.001.00----------------------------------------------------------------------------------------------------------------------------------1.00---------------------
...............................................................................................................................................................................................................................................................................................................................................................................GCACCGACCTGCTCTCCCAGT.................................................211.000.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CGTGCTGTCTTTCTGCGGC...................1911.001.00-----------------------------------------------------------------------------1.00--------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGAC.................................................................................................2311.0012.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTATA.................................................................................................2311.004.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................GGACAAGGAGCTCCGTGCTG...............................2011.001.00----------------------------1.00---------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................CCTGGGAAACCTGTGTCGGGCTGTG.................................................................................................2511.001.00--------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................CTGGGAAACCTGTGTCGGGCTGGGA................................................................................................2511.002.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AAACAGTTAGGTGTGGTGACGGT.................................................................................................................................................................................................................................................2311.001.00-------------------1.00------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................CTGGGAAACCTGTGTCGG.......................................................................................................1811.001.00----------------------------------------------------1.00---------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................GCACCGACCTGCTCTGGG....................................................181.000.00----------------------------------------------------------------1.00---------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CTGCACCGACCTGCTCTCCCAGTA................................................2411.007.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGGGG................................................................................................2411.0012.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTAT..................................................................................................2211.004.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................TGTCGGGCTGTGAGTGTTTTCTGGGA...................................................................................2611.001.00-------------------------------------------------------------------------------------------------------------------------------------------------1.00------
....................ACAACATCTGCTTCCTCCCTGAAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00---------------------------------------------1.00----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................GAGCTATACAAACAGTA................................................................................................................................................................................................................................................................171.000.00-------------------------------------------------------------------------------------1.00------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTTGC...............................................................................................2511.00103.00----------------------------------------------------------------------------------------------------------------1.00---------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGAT...............................................................................................2511.0075.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGTTTT.............................................................................................2711.0057.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTAA..................................................................................................2211.004.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................GGCTAAGAAGCACTGTTGCTTC..................................................................................................................................................221.000.00----------------------------------------------------------------------------------------1.00---------------------------------------------------------------
......................................................................................................GCTGATGGTGTCACAGC..............................................................................................................................................................................................................................................................................................................................1720.500.50---------------------------------------------------------------------------------------------------0.50----------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................AGGACAAGGAGCTCCG....................................1620.500.50--------------------------0.50-----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................AGAAGCACTGTTGGGAGA.................................................................................................................................................1830.330.33----------------------------------------------------------------------------------------------------0.33---------------------------------------------------
............................................................................................................................................................................................................GTACAGTGAACCG............................................................................................................................................................................................................................1380.120.12---------------------------------------------------------0.12----------------------------------------------------------------------------------------------

Antisense strand
ACCTTGCCTTCCCACCCCCTACAACATCTGCTTCCTCCCTGAAAATGCAGGTGGGGGTCACTGCTGCTCTGGGATAGAGATTGCATTGCCTCTCATGGCTAAGCTGATGGTGTCACAGCCCTACCTCCAAGCTGACCTCAGGCTTCTCTAGCCTGGGAGCAAAGGAGCTATACAAACAGTTAGGTGTGGTGACGGTACCAGTCAGTACAGTGAACCGATCAAGGGGCTCTGAACAGGAGCTGTCTGTTCAACACTTGTAGAACTCACTGGGCTAAGAAGCACTGTTGGGAGAGGCAAAGGGGGGTGGCAGAGGTGCCTGGGAAACCTGTGTCGGGCTGTGAGTGTTTTCTGGGACCTGATACTCACTGCACCGACCTGCTCTCCCAGGACAAGGAGCTCCGTGCTGTCTTTCTGCGGCTCTTTGCTCAGCTCCTGCA
............................................................................................................................................................................................................................................................................................................................((((((.......(((((((.(((((((((...........))))))))).)).)))))......))))))..................................................
........................................................................................................................................................................................................................................................................................................................313.......................................................................387................................................
SizePerfect hitTotal NormPerfect NormmjLiverWT2()
Liver Data. (liver)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR553582(SRX182788)
source: Brain. (Brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		mjLiverWT1()
Liver Data. (liver)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		mjLiverWT3()
Liver Data. (liver)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR206942(GSM723283)
other. (brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR206941(GSM723282)
other. (brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR206939(GSM723280)
other. (brain)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR206940(GSM723281)
other. (brain)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR037902(GSM510438)
testes_rep3. (testes)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR037906(GSM510442)
brain_rep3. (brain)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		mjTestesWT1()
Testes Data. (testes)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR073955(GSM629281)
total RNA. (blood)		SRR306543(GSM750586)
19-24nt. (ago2 brain)		GSM361415(GSM361415)
WholeCerebellum_P6_p53--_Ink4c--_rep4. (brain)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		GSM361398(GSM361398)
CGNP_P6_p53--_Ink4c--_rep1. (brain)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR014229(GSM319953)
10 dpp MILI. (mili testes)		GSM361407(GSM361407)
CGNP_P6_Ptc+-_Ink4c--_rep5. (brain)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR346415(SRX098256)
source: Testis. (Testes)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR306538(GSM750581)
19-24nt. (ago2 brain)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		mjTestesWT2()
Testes Data. (testes)		GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		GSM317184(GSM317184)
TRIM32 IP small RNAs from mouse brain. (trim32 brain)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR525241(SRA056111/SRX170317)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR553586(SRX182792)
source: Testis. (testes)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
.............................................................................................................................................................................................................................................................................................................................TGGGAAACCTGTGTCGGGCTGTGA................................................................................................ 2412.002.00---------------------------------------------------------------------------------------------------------1.00----1.00-----------------------------------------
...........................................................................................................................................................................................................................................GGAGCTGTCTGTTCAGA......................................................................................................................................................................................... 172.000.00--------------------------------------------------------2.00-----------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................GGAGCTGTCTGTTCAG.......................................................................................................................................................................................... 162.000.00------------------------------------------------1.00-------1.00-----------------------------------------------------------------------------------------------
.......................ACATCTGCTTCCTCCCCGA........................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------------------------------------------------------------------1.00--
...................................................................................................................................................................................................................................................................................................................................................................................CGACCTGCTCTCCCATAT................................................ 181.000.00---------------------------------------------------------1.00----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................GGGAAACCTGTGTCGGGCTGTGAC............................................................................................... 241.000.00-----------------------------------------------------------------------------------------------------------1.00--------------------------------------------
........................CATCTGCTTCCTCCCCTA........................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00----------------------------------------------------------------1.00---------------------------------------------------------------------------------------
..CTTGCCTTCCCACCCCTCC................................................................................................................................................................................................................................................................................................................................................................................................................................ 191.000.00--------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................GGGAAACCTGTGTCGGGCTGTGC................................................................................................ 2311.000.00------------------------------------------------------------------------------------------------------------------------------------1.00-------------------
...........................................................ACTGCTGCTCTGGGATTCAT...................................................................................................................................................................................................................................................................................................................................................................... 201.000.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------