ID: mmu-mir-6949
GENE: Mcpt8(4)
chr14:56701188-56701766-


(1)
AGO2.ip
(2)
B-CELL
(8)
BRAIN
(2)
CELL-LINE
(1)
DGCR8.mut
(3)
EMBRYO
(3)
ESC
(1)
HEART
(1)
KIDNEY
(7)
OTHER
(2)
SPLEEN
(1)
TESTES

Sense strand
CCATCCAGCTCTGTGTGGGAAATCCCAGTGAGAATAAGGCTACTGGTAAGGTAAGGACATAACCATCTTTTAATGTTTTCCCAGGGACAGAGCAATACTGCAGACACACAGGCAGCCTATCTCCAGCTGTACAACCATGGCTAGTCTAGAGGACATAGAGGGAACAAAATATGGGGACCTGGCATTCACCCTCAGCCAAACTTTTGTCCTTTCACCATGGGAAAATAGGAGAGCTACGTCTAGTTAACCTGAAGGAGGGTCACAACCAGGCAGAGACACTCAAGTCAGTGAGTCAGGCTCTCTATTCAGTCATATTCAGAATCGAGGTCAATGGAGGCACTAATATTTCCCATATGAAAACCCAGGCCGTAGTGGGAACAACAACAACAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAAAAATAAAAAACAGGGAGAAAGTGGGTCTAGAAAGAGGTGAAAAGAGTATTTACTAAAACTTCCCCTTTTTCTATCCACAGGGTGACTCTGGCGGACCCTTTGTGTGTAATGGGGTGGTCCAGGGCATTGT
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................((((((..(((((((((.(((...(((....))).....))).)))))))))))))))....................................................
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................462................................................................529................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR037937(GSM510475)
293cand2. (cell line)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGGGTCTAGAAAGAGGTGA..........................................................................................23124.0024.0021.00-2.00-----------1.00---------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGGGTCTAGAAAGAGGTG...........................................................................................22115.0015.0015.00-----------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGGGTCTAGAAAGAGGTGAA.........................................................................................24113.0013.0012.00---------------1.00-------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGGGTCTAGAAAGAGGT............................................................................................21111.0011.0011.00-----------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGGTCTAGAAAGAGGTGA..........................................................................................2218.008.008.00-----------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGTCTAGAAAGAGGTGAA.........................................................................................2217.007.007.00-----------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGTCTAGAAAGAGGTGA..........................................................................................2117.007.007.00-----------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCCTTTTTCTATCCACAGT.................................................2216.001.004.00-------------------1.00---1.00-----
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGGTCTAGAAAGAGGTGAA.........................................................................................2316.006.006.00-----------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGTCTAGAAAGAGGTGAAA........................................................................................2314.004.004.00-----------------------------
....................................................................................................................................................................................................................................................................................................................................................................................TGGGAACAACAACAACGC.............................................................................................................................................................................................184.000.00-4.00----------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGGTCTAGAAAGAGGTG...........................................................................................2114.004.004.00-----------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCCTTTTTCTATCCACAGT.................................................214.000.003.00-1.00---------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGGTCTAGAAAGAGGTGAAA........................................................................................2414.004.003.00-1.00---------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGGTCTAGAAAGAGGTGAAAT.......................................................................................2513.004.003.00-----------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATAAAAAAAATAAAAGAGG......................................................................................................................223.000.00----3.00-------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGTCTAGAAAGAGGTG...........................................................................................2012.002.002.00-----------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGGGTCTAGAAAGAGGTGAAA........................................................................................2512.002.002.00-----------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGTGGGTCTAGAAAGAGGTGT..........................................................................................241.000.001.00-----------------------------
..........................................................................................AGCAATACTGCAGACACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---1.00--------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGTCTAGAAAGAGGTGAAAAG......................................................................................2511.001.001.00-----------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAATAAAAAACAGCG...................................................................................................................201.000.00------1.00-----------------------
.....................................................................................................................................................................................................................................................................ACAACCAGGCAGAGACACCGA.........................................................................................................................................................................................................................................................................................................211.000.00---------1.00--------------------
.........................................................................................................................................................................................................................TGGGAAAATAGGAGAGCA........................................................................................................................................................................................................................................................................................................................................................181.000.00----------1.00-------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCCTTTTTCTATCCACAG..................................................2111.001.001.00-----------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAAAAAATAAAAAACAGGGTAGA...............................................................................................................261.000.00---1.00--------------------------
..................................................................................................................................................................................CTGGCATTCACCCTCTTAA..............................................................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------1.00------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACTAAAACTTCCCTA................................................................181.000.00---------------1.00--------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCCTTTTTCTATCCACT...................................................201.000.001.00-----------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGTCTAGAAAGAGGTGAAAAGA.....................................................................................2611.001.001.00-----------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGAAAAGAGTATTCCT.............................................................................191.000.00--------1.00---------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGTCTAGAAAGAGGTGATT........................................................................................2311.007.001.00-----------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGGGTCTAGAAAGAGGTGATT........................................................................................2511.0024.001.00-----------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGGGTCTAGAAAGAGGTGAAAA.......................................................................................2611.001.001.00-----------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGTCTAGAAAGAGGTGA..........................................................................................2011.001.001.00-----------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAATAAAAAACGGAC...................................................................................................................201.000.00---------------------------1.00--
.....................................................................................................................................................................................................................................................................ACAACCAGGCAGAGACAGGCA.........................................................................................................................................................................................................................................................................................................211.000.00-------1.00----------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAAAAATAAAAAACAGGAAG.................................................................................................................231.000.00---1.00--------------------------
.....................................................................................................................................................................................................................................................................ACAACCAGGCAGAGACACGCA.........................................................................................................................................................................................................................................................................................................211.000.00-----1.00------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGGTCTAGAAAGAGGT............................................................................................2011.001.001.00-----------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGGTCTAGAAAGAGGTCAA.........................................................................................2311.001.001.00-----------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGGTCTAGAAAGAGG.............................................................................................1911.001.001.00-----------------------------
...................................................................................................................................................................................................................................................................................................................................................................................GTGGGAACAACAACAAC...............................................................................................................................................................................................1750.200.20----------------------------0.20-

Antisense strand
CCATCCAGCTCTGTGTGGGAAATCCCAGTGAGAATAAGGCTACTGGTAAGGTAAGGACATAACCATCTTTTAATGTTTTCCCAGGGACAGAGCAATACTGCAGACACACAGGCAGCCTATCTCCAGCTGTACAACCATGGCTAGTCTAGAGGACATAGAGGGAACAAAATATGGGGACCTGGCATTCACCCTCAGCCAAACTTTTGTCCTTTCACCATGGGAAAATAGGAGAGCTACGTCTAGTTAACCTGAAGGAGGGTCACAACCAGGCAGAGACACTCAAGTCAGTGAGTCAGGCTCTCTATTCAGTCATATTCAGAATCGAGGTCAATGGAGGCACTAATATTTCCCATATGAAAACCCAGGCCGTAGTGGGAACAACAACAACAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAAAAATAAAAAACAGGGAGAAAGTGGGTCTAGAAAGAGGTGAAAAGAGTATTTACTAAAACTTCCCCTTTTTCTATCCACAGGGTGACTCTGGCGGACCCTTTGTGTGTAATGGGGTGGTCCAGGGCATTGT
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................((((((..(((((((((.(((...(((....))).....))).)))))))))))))))....................................................
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................462................................................................529................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR037937(GSM510475)
293cand2. (cell line)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
..............................................................CCATCTTTTAATGTTCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 182.000.00-----1.00-1.00----------------------
..............................................................CCATCTTTTAATGTTCATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 191.000.00----------1.00-------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTTCCCCTTTTTGT.......................................................... 181.000.00------------------1.00-----------
.............................................................................................................................................................................GGGACCTGGCATTCAAAGC................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-------------1.00----------------
..............................................................CCATCTTTTAATGTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00---------1.00--------------------
..............................................................CCATCTTTTAATGTTCAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 191.000.00------1.00-----------------------
............................................................................................................................................................................................CCCTCAGCCAAACTTGAAC.................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00------------1.00-----------------
............................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAAAAATAAAAGTT.................................................................................................................................................................................. 211.000.00-------------------------1.00----
............................................................................................................................................................................................CCCTCAGCCAAACTTGG...................................................................................................................................................................................................................................................................................................................................................................................... 171.000.00--------1.00---------------------
..............................................................................................................................................................................GGACCTGGCATTCACAGCA.................................................................................................................................................................................................................................................................................................................................................................................................. 191.000.00-----------1.00------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAAAAAATAAAAAGCGT..................................................................................................................... 201.000.00---------------------1.00--------
.............................................................ACCATCTTTTAATGTTATTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 201.000.00--------------------------1.00---
........................................................................................................................CTCCAGCTGTACAACGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00-----------------------1.00------
......................................................................................................................ATCTCCAGCTGTACATTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00-------------------1.00----------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTACTAAAACTTCGGT................................................................. 181.000.00----------------------1.00-------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGGGTCTAGAA.................................................................................................. 1590.110.11-----0.11------------------------
.................................................................................................................................................................................................................................................................................................................................................CACTAATATTTCCCA................................................................................................................................................................................................................................... 1590.110.11-----------------------------0.11