ID: mmu-mir-6929
GENE: 1700113I22Rik
chr11:101280451-101280700-


(2)
AGO1.ip
(8)
AGO2.ip
(2)
AGO3.ip
(6)
B-CELL
(23)
BRAIN
(2)
CELL-LINE
(1)
DGCR8.mut
(8)
EMBRYO
(3)
ESC
(5)
FIBROBLAST
(8)
HEART
(1)
KIDNEY
(4)
LIVER
(4)
LYMPH
(16)
OTHER
(5)
OTHER.mut
(1)
OVARY
(3)
PANCREAS
(5)
PIWI.ip
(1)
PIWI.mut
(3)
SKIN
(6)
SPLEEN
(23)
TESTES
(1)
THYMUS
(2)
UTERUS

Sense strand
GTGACACCGTTTGAAATCCTCAAAACAAGGGTGCACAATAGAGTTCTGTTCACTGAGTCCTGGTGCTTTACCTCATTCCCCAAAGTGAGCCTCCCAAGAGATGTGACTCGGGATTCCAGGAGAGCAGCTGGGGGAGGGAGGGAGGAGCAGCATCTGTGAAGGCTGCCATAGAAACCACAGGTGCTGTCTTCTTCTTCCAGGATGATTCTGACAGCTAACTAGCTTTCTGTGACGGTGGAGCCGGGGAGGA
........................................................................................................................................((((((((((((((((((((((....(((...)))....))))))))))).)))))))))))....................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR363964(GSM822766)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR394083(GSM855969)
background strain: C57BL6/SV129cell type: KRa. (cell line)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
mjLiverWT1()
Liver Data. (liver)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
mjTestesWT4()
Testes Data. (testes)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR042476(GSM539868)
mouse heart tissue [09-002]. (heart)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)
SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR037905(GSM510441)
brain_rep2. (brain)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR525241(SRA056111/SRX170317)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR206939(GSM723280)
other. (brain)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR059765(GSM562827)
DN3_control. (thymus)
mjTestesWT3()
Testes Data. (testes)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
GSM475280(GSM475280)
Mili-IP. (mili testes)
GSM361395(GSM361395)
CGNP_P6_wt_rep2. (brain)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
GSM361402(GSM361402)
CGNP_P6_p53--_Ink4c--_rep5. (brain)
SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)
SRR073955(GSM629281)
total RNA. (blood)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR206940(GSM723281)
other. (brain)
SRR060845(GSM561991)
total RNA. (brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
SRR037907(GSM510443)
brain_rep4. (brain)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR095855BC10(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR553586(SRX182792)
source: Testis. (testes)
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTTCCAG..................................................23144.0044.00----11.002.003.009.00-5.001.001.00-2.00--2.001.001.00------------1.00-----------------------------1.00----------1.00----1.00--------------------1.00-----------------1.00--
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTTCCAGT.................................................24131.0044.00-7.00----1.00--3.002.00----1.00-------1.001.00---2.00----1.001.00--2.00-1.00-1.00--1.00-------1.00------------1.00--------------1.00--------------------1.00-----1.00-----1.00-----
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTTCCA...................................................22129.0029.00-8.0014.00---1.00---1.00--------------2.00------------------1.00-----------------------1.00-----------------------------------1.00--------------
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTTCC....................................................21118.0018.00------3.00----4.00-2.00-----1.00--1.00------1.00-1.00-------1.00------2.00---------------------------1.00----------------------------1.00---------------
.......................................................................................................TGACTCGGGATTCCAGGAGAGCAGCTGGGGGAGGGAGGGAGGAGCAGCATCT...............................................................................................52116.0016.0016.00----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................AGGGAGGAGCAGCATCTGTGA...........................................................................................21114.0014.00-----3.00------1.001.00------3.001.00-----1.00-------------------1.00--1.00--------------------------------------1.00-------------------1.00---------
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTTCCAGAT................................................2518.0044.00--------8.00--------------------------------------------------------------------------------------------------------------
......................................................................................................................................AGGGAGGGAGGAGCAGCATCTGT.............................................................................................2317.007.00-----2.00----1.00----------------------------------------------1.00-------------1.00---------------------------------------1.00---1.00---
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTTC.....................................................2016.006.00------1.00---1.001.00-----1.00---------------------------------------------------------1.00--------------------------1.00----------------
.......................................................................................................................................GGGAGGGAGGAGCAGCATCTGT.............................................................................................2216.006.00----------------------1.00-------------------------------1.00---1.00---1.00---------------------1.00------------1.00---------------------
..........................................................................................................................................AGGGAGGAGCAGCATCTGTG............................................................................................2016.006.00--------------------------------------1.00---1.001.00------------1.00------------1.00-------------1.00-----------------------------------
.........................................................................................................................................GAGGGAGGAGCAGCATCTGTG............................................................................................2115.005.00-----1.00---------3.00------------------------------------------------------------------------------1.00------------------------
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTTCCAGA.................................................2415.0044.00-------------------1.00---------------------------------------1.00----------1.00------------------------1.00--------------1.00--------
.........................................................................................................................................GAGGGAGGAGCAGCATCTGTGA...........................................................................................2215.005.00--------------2.00------------1.00--------------------1.00-----------------1.00----------------------------------------------------
..........................................................................................................................................AGGGAGGAGCAGCATCTGTGT...........................................................................................2114.006.00-----1.00----------1.00--------------------------1.00--------------------1.00------------------------------------------------------
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTTCCAT..................................................2313.0029.00-----------------1.00-----------------------------1.00-------------------------------1.00---------------------------------------
..................................................................................................................................................................................AGGTGCTGTCTTCTTCTTCCAGT.................................................2313.001.00-----------------------1.00-----1.00---1.00-------------------------------------------------------------------------------------
......................................................................................................................................AGGGAGGGAGGAGCAGCATCTGTGT...........................................................................................2513.001.00--------------1.00---------------------------1.00--------------------------------------------1.00-------------------------------
...............................................GTTCACTGAGTCCTGGTGCTTT.....................................................................................................................................................................................2212.002.00----------------------------------------------------------------------------1.00-----------------------------------1.00------
.....................................................................................................................................................................................................CAGGATGATTCTGACAGCTAACTAGC...........................2612.002.00------------------------2.00----------------------------------------------------------------------------------------------
................................................................................................................................................................................ACAGGTGCTGTCTTCTTCTTCC....................................................2212.002.00----------1.00--------1.00---------------------------------------------------------------------------------------------------
......................................................................................................................................AGGGAGGGAGGAGCAGCATCTGG.............................................................................................232.000.00--------------------------1.00---------------------------------------------------------------------1.00----------------------
..........................................................................................................................................AGGGAGGAGCAGCATCTGT.............................................................................................1912.002.00------------------------------1.00-------1.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TAGCTTTCTGTGACGGTGGAGCCGGG.....2611.001.00--------------------------------------------------------------------------------------------1.00--------------------------
...........................................................................................................................................................................................................................TAGCTTTCTGTGACGGTGGAGCCGG......2511.001.00---------------------------------------------------------------------------------------------------------------------1.00-
.....................................................................................................................................GAGGGAGGGAGGAGCAGCATCTG..............................................................................................2311.001.00----------------------1.00------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TGTGACGGTGGAGCCAACT....191.000.00----------------------------------------------------------------------------------------1.00------------------------------
..........................................................................................................................................AGGGAGGAGCAGCATCTGTGTAT.........................................................................................2311.006.00----------------------------------1.00------------------------------------------------------------------------------------
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTTCCAA..................................................2311.0029.00------------------1.00----------------------------------------------------------------------------------------------------
......................................................................................................................................AGGGAGGGAGGAGCAGCATCTGTGA...........................................................................................2511.001.00------------------------------------------------------------1.00----------------------------------------------------------
............................................................................................................................................................TGAAGGCTGCCATAGAAACCACA.......................................................................2311.001.00------------1.00----------------------------------------------------------------------------------------------------------
.........................................................................................................................................GAGGGAGGAGCAGCATCTGTGG...........................................................................................2211.005.00--------------------------1.00--------------------------------------------------------------------------------------------
.......................................................................................................................................GGGAGGGAGGAGCAGCATCTGTA............................................................................................2311.006.00---------------------------------------------------------------------------------------------1.00-------------------------
.........................................................................................................................................GAGGGAGGAGCAGCATCTGGG............................................................................................211.000.00--------------------------------1.00--------------------------------------------------------------------------------------
....................................................................................................................................................................................GTGCTGTCTTCTTCTTCCAGT.................................................211.000.00-----------------------------------------1.00-----------------------------------------------------------------------------
......................................................................................................................................AGGGAGGGAGGAGCAGCATCGGTG............................................................................................2421.001.00------------------------------------------------------------------------------------------------------------------1.00----
.....................................................................................................................................GAGGGAGGGAGGAGCAGCATCTGT.............................................................................................2411.001.00------------1.00----------------------------------------------------------------------------------------------------------
......................................................................................................................................AGGGAGGGAGGAGCAGCATA................................................................................................201.000.00-------------------------------------------------------------------------------------------1.00---------------------------
...................................................................................................................................................................................GGTGCTGTCTTCTTCTTCCAGT.................................................221.000.00-----------------------1.00-----------------------------------------------------------------------------------------------
..........................................................................................................................................AGGGAGGAGCAGCATCTGTGAGA.........................................................................................2311.0014.00-----------------------------------1.00-----------------------------------------------------------------------------------
..........................................................................................................................................AGGGAGGAGCAGCATCTGTGAT..........................................................................................2211.0014.00---------------------------------------------------------------------------------------------------1.00-------------------
..........................................................................................................................AGCAGCTGGGGGAGGACGC.............................................................................................................191.000.00---------------------------------------------------1.00-------------------------------------------------------------------
..................................................................................................................................................................................AGGTGCTGTCTTCTTCTTCCAG..................................................2211.001.00---------------------------------------------1.00-------------------------------------------------------------------------
................................................................................................................................................................................ACAGGTGCTGTCTTCTTCT.......................................................1911.001.00-------------------------------------------------------------------------1.00---------------------------------------------
..................................................................................................................................................................................AGGTGCTGTCTTCTTCTTCCA...................................................2111.001.00-------------------------------------------------------------------1.00---------------------------------------------------
.......................................................................................................................................GGGAGGGAGGAGCAGCATCTGTG............................................................................................2311.001.00-----1.00-----------------------------------------------------------------------------------------------------------------
......................................................................................................................................AGGGAGGGAGGAGCAGCACCT...............................................................................................211.000.00--------------------------------1.00--------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................ACTAGCTTTCTGTGACGGTGGAGCCGGG.....2811.001.00---------------------------------------------------------------------------------1.00-------------------------------------
......................................................................................................................................AGGGAGGGAGGAGCAGCATCT...............................................................................................2111.001.00---------------------------------------------1.00-------------------------------------------------------------------------
.......................................................................................................................................GGGAGGGAGGAGCAGCATCTG..............................................................................................2111.001.00------------1.00----------------------------------------------------------------------------------------------------------
......................................................................................................................................AGGGAGGGAGGAGCAGCATCTGTG............................................................................................2411.001.00---------------------------------------------------------------------------------------------------------1.00-------------
..........................................................................................................................................AGGGAGGAGCAGCATCTGTGAA..........................................................................................2211.001.00--------------1.00--------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................TGACAGCTAACTAGCTTTCTGTGACGGTG.............2911.001.00----------------------------------------------------------------------------------------------------1.00------------------
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTTCCCG..................................................2311.0018.00----1.00------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................GGGAGGGAGGAGCAGCATCT...............................................................................................2011.001.00------------1.00----------------------------------------------------------------------------------------------------------
......................................................................................................................................AGGGAGGGAGGAGCAGCATC................................................................................................2021.001.00----------------------------------------1.00------------------------------------------------------------------------------
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTTCCAGTAA...............................................2611.0044.00----------------------------------------------------------------------------------------------------------1.00------------
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTTCCAGTA................................................2511.0044.00-----------------------------------1.00-----------------------------------------------------------------------------------
......................................................................................................................................AGGGAGGGAGGAGCAGCATCTGA.............................................................................................231.000.00------------------1.00----------------------------------------------------------------------------------------------------
.........................................................................................................................................GAGGGAGGAGCAGCATCTGTGT...........................................................................................2211.005.00-----1.00-----------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................AAGGCTGCCATAGAAACCA.........................................................................1911.001.00---------------------1.00-------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTTCCT...................................................2211.0018.00------------1.00----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GACAGCTAACTAGCTTTCT......................1911.001.00---------------------1.00-------------------------------------------------------------------------------------------------
.......................................................................................................................................GGGAGGGAGGAGCAGCATCTGTATA..........................................................................................2511.006.00------------------------------1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................................................TGCTGTCTTCTTCTTTG....................................................171.000.00---------------------------------------------------------------1.00-------------------------------------------------------
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTTCCAGAA................................................2511.0044.00----------------1.00------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CAGGTGCTGTCTTCTTCTT......................................................1911.001.00-------------------------------------------------------------------------------------1.00---------------------------------
.........................................................................................................................................GAGGGAGGAGCAGCATCTGGGT...........................................................................................221.000.00------------------------------------------------1.00----------------------------------------------------------------------
................................................................................................................................................................................ACAGGTGCTGTCTTCTTCTTC.....................................................2111.001.00------------------------------------------------------------------------------------------------------------1.00----------
.............................................................................................................................................................GAAGGCTGCCATAGAAAC...........................................................................1820.500.50--------------------------------------------------0.50--------------------------------------------------------------------
......................................................................................................................................................................................................AGGATGATTCTGACA.....................................1580.380.38----------------------------------------------------------------------------------------------------------------------0.38

Antisense strand
GTGACACCGTTTGAAATCCTCAAAACAAGGGTGCACAATAGAGTTCTGTTCACTGAGTCCTGGTGCTTTACCTCATTCCCCAAAGTGAGCCTCCCAAGAGATGTGACTCGGGATTCCAGGAGAGCAGCTGGGGGAGGGAGGGAGGAGCAGCATCTGTGAAGGCTGCCATAGAAACCACAGGTGCTGTCTTCTTCTTCCAGGATGATTCTGACAGCTAACTAGCTTTCTGTGACGGTGGAGCCGGGGAGGA
........................................................................................................................................((((((((((((((((((((((....(((...)))....))))))))))).)))))))))))....................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR363964(GSM822766)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR394083(GSM855969)
background strain: C57BL6/SV129cell type: KRa. (cell line)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
mjLiverWT1()
Liver Data. (liver)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
mjTestesWT4()
Testes Data. (testes)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR042476(GSM539868)
mouse heart tissue [09-002]. (heart)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)
SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR037905(GSM510441)
brain_rep2. (brain)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR525241(SRA056111/SRX170317)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR206939(GSM723280)
other. (brain)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR059765(GSM562827)
DN3_control. (thymus)
mjTestesWT3()
Testes Data. (testes)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
GSM475280(GSM475280)
Mili-IP. (mili testes)
GSM361395(GSM361395)
CGNP_P6_wt_rep2. (brain)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
GSM361402(GSM361402)
CGNP_P6_p53--_Ink4c--_rep5. (brain)
SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)
SRR073955(GSM629281)
total RNA. (blood)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR206940(GSM723281)
other. (brain)
SRR060845(GSM561991)
total RNA. (brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
SRR037907(GSM510443)
brain_rep4. (brain)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR095855BC10(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR553586(SRX182792)
source: Testis. (testes)
........................................................................................................................................................................................TGTCTTCTTCTTCCAGGA................................................ 1816.006.00---6.00-------------------------------------------------------------------------------------------------------------------
.............................................CTGTTCACTGAGTCCTGGT.......................................................................................................................................................................................... 1916.006.00---6.00-------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................AACCACAGGTGCTGTCTTCTTCTTCCA................................................... 2713.003.00------------------------------------1.00-----------------------------------------1.00-----------1.00----------------------------
..................................................CACTGAGTCCTGGTGCTT...................................................................................................................................................................................... 1822.002.00---1.50---------------------------------------------0.50---------------------------------------------------------------------
.................................................................................................................................GGGGGAGGGAGGGAGGAGGGTT................................................................................................... 222.000.00----------------------------------------------------------------------------------1.00---1.00--------------------------------
...........................................................................TTCCCCAAAGTGAGCCTCCCAA......................................................................................................................................................... 2211.001.00----------------------------------------1.00------------------------------------------------------------------------------
...........................................................................................................................................................................AAACCACAGGTGCTGTCTTCTTCTTCCA................................................... 2811.001.00------------------------------------1.00----------------------------------------------------------------------------------
.............................................................................................................................................................................................................TTCTGACAGCTAACTACTGA......................... 201.000.00-------------------------------------------------1.00---------------------------------------------------------------------
......................................................GAGTCCTGGTGCTTTACCT................................................................................................................................................................................. 1911.001.00-------------------------------------------------------1.00---------------------------------------------------------------
.............................................................................................................................................................................................................................GCTTTCTGTGACGGTGGA........... 1811.001.00-----------------------------------------------------1.00-----------------------------------------------------------------