ID: mmu-mir-6896
GENE: Bpag1(6)
chr1:34174077-34174326+


(1)
AGO.mut 		(1)
AGO1.ip 		(20)
AGO2.ip 		(1)
AGO3.ip 		(42)
BRAIN 		(3)
CELL-LINE 		(2)
DCR.mut 		(1)
DGCR8.mut 		(9)
EMBRYO 		(14)
ESC 		(7)
FIBROBLAST 		(7)
HEART 		(5)
LIVER 		(1)
LUNG 		(1)
LYMPH 		(9)
OTHER 		(4)
OTHER.mut 		(3)
SKIN 		(1)
SPLEEN 		(11)
TESTES 		(2)
TOTAL-RNA 		(1)
UTERUS

Sense strand
CGGTATGTGCTCTAGAAGGGAGAGCCCCAGCAGTACCCAGTTTCGGCTTAGATGTGTTTGTCATCTAGAGTGTGGAAGGGAAGGCCGTAGCATCTGGTGACCTGTGTGTTCTTTGTGTCATTTAGCGTTTCCTTTGTAGGCGACGAGAACCCGTGCCTGGTGTGTAATAATCACTGTTTCTCTCTCTCACCTACAAACAGGTGAAGTTGGTGAACATCAGAAATGATGACATAACAGATGGAAATCCTAA
....................................................................................................................................((((((((.((.((((..(((....))).(((.......)))........)))))).)))))))).....................................................
...............................................................................................................................128.....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR206942(GSM723283)
other. (brain)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR206939(GSM723280)
other. (brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR206940(GSM723281)
other. (brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR206941(GSM723282)
other. (brain)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR037906(GSM510442)
brain_rep3. (brain)		mjTestesWT2()
Testes Data. (testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR306526(GSM750569)
19-24nt. (ago2 brain)		SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		mjTestesWT1()
Testes Data. (testes)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)		SRR095855BC5(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)		SRR095853(SRX039174)
sequencing of miRNA from wild type and diseas. (heart)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR095855BC8(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR095855BC10(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR306543(GSM750586)
19-24nt. (ago2 brain)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
....................................................................................................................................TTTGTAGGCGACGAGAACCCGT................................................................................................221174.00174.0056.0012.0011.004.001.005.002.004.00-1.00---2.001.004.002.001.006.00--2.006.001.002.004.00-2.003.00-3.00-3.00-3.003.004.00--1.004.004.002.00---------2.00-1.00---------1.001.00--1.00-------------1.001.00---1.00---1.00----1.00-----1.001.00------1.001.00----
...................................................................................................................................CTTTGTAGGCGACGAGAACCCG.................................................................................................221114.00114.0016.0020.002.001.002.004.001.001.005.00--4.00---1.004.002.00-3.00-2.00-2.001.00-3.003.00-6.001.001.00----1.003.00-2.00---1.00-2.001.001.00-1.002.00--2.00-2.00----2.00-------1.00--1.00-------2.001.00--------------1.00--1.001.00---------1.00------
....................................................................................................................................TTTGTAGGCGACGAGAACCCG.................................................................................................21172.0072.0047.003.001.001.001.00-3.001.00------1.00-1.00-1.00----1.00-1.00-----2.001.00--1.00--------------------1.001.00--------------1.00--1.00----------------1.00--------1.00--------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGTG...............................................................................................23149.0049.0020.004.00-3.00--3.00------2.00---------1.00-1.00----2.00---1.001.00-2.00--2.00-----------1.00--1.00-1.00---1.00----------1.00-2.00-----------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGTGT..............................................................................................24146.0049.0016.005.005.00--------1.00-1.00----2.00---2.00-1.001.00--1.00--1.002.00----1.00----1.00----1.00-1.00---1.001.00--------------1.00-------1.00--------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCGT................................................................................................23145.0045.001.0010.005.001.004.001.00--1.00----2.00--2.00------1.001.001.001.00-1.00--2.00--------------1.00-2.00---1.00-1.001.00-2.00--1.001.00----------------1.00-------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCGA................................................................................................23143.00114.004.005.002.002.00---1.003.00-12.001.00-1.00--1.001.00---1.00-1.00-------1.00-----1.00-----1.00----1.00-----1.00----------1.00----------2.00---------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACC...................................................................................................20124.0024.003.001.001.00-1.00-1.00--4.00-1.004.00-1.00--------------1.00--------4.00----------------------------------------------------------1.00------1.00-----------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGA................................................................................................22121.0072.006.001.00--1.00--------1.002.00--------1.001.00-1.00-----1.00---------------1.00-------2.00--------------1.00------1.00------1.00------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCC..................................................................................................21120.0020.00-5.00---2.00-3.002.001.00----2.00-------------1.00-----2.00----------------------------------1.00----------1.00-----------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGTGA..............................................................................................24115.0049.004.001.00----1.00----------1.00---------1.001.00-1.00----------1.002.00---1.00---------1.00-----------------------------------------------------------
.....................................................................................................................................TTGTAGGCGACGAGAACCCGTGT..............................................................................................23114.007.005.00-1.00--------2.00-----1.00------1.00---------------------1.00----------------------------1.00------------------------------1.00-----1.00---
..................................................................................................................................CCTTTGTAGGCGACGAGAACCC..................................................................................................22114.0014.0010.00-1.00-1.00------1.00---------1.00----------------------------------------------------------------------------------------------
.................................................................................................................................TCCTTTGTAGGCGACGAGAACC...................................................................................................22113.0013.006.002.00------1.00--------1.00-1.00----------------------------------------------1.00---------------------------------1.00---------------
...................................................................................................................................CTTTGTAGGCGACGAGAAC....................................................................................................19113.0013.00----1.00-1.00-----6.001.00------1.00----------1.00-----------------------------------1.00---------1.00--------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCC..................................................................................................20112.0012.007.001.00--2.00---------------------------------1.00--------------------------------------------------------------------------1.00--
.....................................................................................................................................TTGTAGGCGACGAGAACCCGT................................................................................................21111.0011.001.00--1.00-4.00--------1.00---------1.00--------------------------1.00------1.00-----1.00---------------------------------------------------
..................................................................................................................................CCTTTGTAGGCGACGAGAACCCG.................................................................................................23110.0010.00-2.00--1.002.00-1.00------------------1.001.00---------------1.00--1.00---------------------------------------------------------------------
..................................................................................................................................CCTTTGTAGGCGACGAGAACCCGT................................................................................................2418.008.001.003.002.00------------------------------------------------------------2.00----------------------------------------------------
..................................................................................................................................CCTTTGTAGGCGACGAGAACC...................................................................................................2118.008.002.001.00------------1.00----1.00-2.00---------------------------------------1.00------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAA.....................................................................................................1817.007.00-1.00-------5.00------------------------------------------------------------------------------------1.00---------------------
......................................................................................................................................................................................................................................ATAACAGATGGAAATCCTAAGCTT247.000.00---------------------------------7.00----------------------------------------------------------------------------------
.....................................................................................................................................TTGTAGGCGACGAGAACCCGTG...............................................................................................2217.007.005.001.00-1.00----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................GGTGAACATCAGAAATGATGACAT..................2416.006.00-------------------3.00---------1.00---------------1.00-1.00--------------------------------------------------------------------
.................................................................................................................................TCCTTTGTAGGCGACGAGAAC....................................................................................................2116.006.00-1.00----1.00-----------------------1.00-----1.00------------------------------------2.00------------------------------------------
..................................................................................................................................CCTTTGTAGGCGACGAGAAC....................................................................................................2015.005.002.00-1.001.00----------------------1.00-----------------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGTA...............................................................................................2315.00174.00---------------1.00-----------1.00-------2.00---------------------------------------------------------1.00----------------------
.................................................................................................................................................................................................................................ATGACATAACAGATGGA........1714.004.00--------------------------------------------4.00-----------------------------------------------------------------------
.................................................................................................................................TCCTTTGTAGGCGACGAGAACCC..................................................................................................2314.004.001.001.00----1.00--------1.00----------------------------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGTGC..............................................................................................2414.004.002.002.00------------------------------------------------------------------------------------------------------------------
......................................................................................................................................TGTAGGCGACGAGAACCCGTGT..............................................................................................2214.003.002.001.00---------------------------------------------------1.00--------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCGTT...............................................................................................2414.0045.001.001.00-----------1.00-----------------------------1.00------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAAC....................................................................................................1813.003.00---------1.00-----------------------------2.00----------------------------------------------------------------------------
......................................................................................................................................................................................................AGGTGAAGTTGGTGAACA..................................1813.003.00------------2.00-------------------------1.00-----------------------------------------------------------------------------
.................................................................................................................................TCCTTTGTAGGCGACGAGA......................................................................................................1913.003.00--------------------3.00-----------------------------------------------------------------------------------------------
................................................................................................................................................................................TTTCTCTCTCTCACCTACAAAC....................................................2213.003.00-----------------1.00----------------------------------------------------2.00---------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGTGTA.............................................................................................2513.0049.003.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCT.................................................................................................2213.0020.00-1.00-------1.00-----1.00----------------------------------------------------------------------------------------------------
......................................................................................................................................TGTAGGCGACGAGAACCCGTG...............................................................................................2113.003.003.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCAT................................................................................................2313.0020.00-3.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGTAA..............................................................................................2413.00174.00--1.00------------------------------------------------1.00------1.00---------------------------------------------------------
......................................................................................................................................TGTAGGCGACGAGAACCCGT................................................................................................2013.003.003.00-------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................TTTCTCTCTCTCACCTACAAACAGT.................................................2513.001.00---------------------------------------------2.00----1.00-----------------------------------------------------------------
.................................................................................................................................................................................TTCTCTCTCTCACCTACAAACAGA.................................................242.000.00------------------------------------------------------------------------------------------1.00--------------1.00----------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGAGT..............................................................................................2412.0072.002.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCGC................................................................................................2312.00114.00--------------1.00----------------------------1.00------------------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCGTGT..............................................................................................252.000.00-1.00-1.00----------------------------------------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGTT...............................................................................................2312.00174.001.00------1.00------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TTGTAGGCGACGAGAACCCGTGA..............................................................................................2312.007.00-1.001.00-----------------------------------------------------------------------------------------------------------------
.................................................................................................................................TCCTTTGTAGGCGACGAGAA.....................................................................................................2012.002.00--------------------------------------1.00--------------------1.00--------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACC...................................................................................................1912.002.00--------------------2.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................TTGTAGGCGACGAGAACCCGTGAA.............................................................................................2412.007.002.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCTT................................................................................................2312.0020.00---2.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................TCCTTTGTAGGCGACGAGAACCCGTGC..............................................................................................2712.002.00--------------------------------------------------------------2.00-----------------------------------------------------
..............................................................................................................................................................................................................TTGGTGAACATCAGAAATGATGACA...................2512.002.00-------------------1.00---------------------------1.00--------------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCGAT...............................................................................................2412.00114.00-1.00---------------------------------------------1.00--------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGAT...............................................................................................2312.0072.00------------------------------------------1.00-------------------1.00-----------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCCT................................................................................................2311.0020.00-1.00------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CCTTTGTAGGCGACGAGAACAA..................................................................................................2211.005.00----1.00---------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCTCTCTCTCACCTACAAACAGT.................................................241.000.00---------------1.00----------------------------------------------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCAA................................................................................................2311.0020.001.00-------------------------------------------------------------------------------------------------------------------
...............................................................TCTAGAGTGTGGAAGCGGT........................................................................................................................................................................191.000.00-----------------------------------------------------------1.00--------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACA...................................................................................................2011.0013.00----1.00---------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................ATGATGACATAACAGATGGAAATCC...2511.001.00--------1.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGTGG..............................................................................................2411.0049.00-1.00------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................CAGAAATGATGACATAACAG.............2011.001.00------------------------------------------------------------------1.00-------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCGTTA..............................................................................................2511.0045.00--1.00-----------------------------------------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGTTTTT............................................................................................2611.00174.00-1.00------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCTCTCTCTCACCTACAAACA...................................................2211.001.00-1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGTGTTTC...........................................................................................2711.0049.00-1.00------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCGG................................................................................................2311.00114.00----------------------------------------------------------------------------------------1.00---------------------------
...............................................................TCTAGAGTGTGGAAGCGGG........................................................................................................................................................................191.000.00-----------------------------------------------------------1.00--------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCA.................................................................................................2211.0020.00---1.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AATGATGACATAACAGATGGAAA......2311.001.00-----------------1.00--------------------------------------------------------------------------------------------------
................................................................................................................................................................................TTTCTCTCTCTCACCTACAAACA...................................................2311.001.00-------------------------------------------------1.00------------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCA..................................................................................................2111.0024.00---------------------------------------------------------------------------------1.00----------------------------------
...............................................................................................................................................................................................TACAAACAGGTGAAGTTCG........................................191.000.00----------------------------------------------------------1.00---------------------------------------------------------
.......................................................................................................................................................................................................GGTGAAGTTGGTGAATA..................................171.000.00-----------1.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCGATT..............................................................................................2511.00114.00-------1.00------------------------------------------------------------------------------------------------------------
......................................................................................................................................TGTAGGCGACGAGAACCCGTGC..............................................................................................2211.001.00-1.00------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGTGAAGTTGGTGAACATC................................2011.001.00--------------1.00-----------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................TGAACATCAGAAATGATGAC....................2021.001.00-------------------------------------------------0.50-------------0.50----------------------------------------------------
..............................................................ATCTAGAGTGTGGAAGGG..........................................................................................................................................................................1811.001.00--------------------1.00-----------------------------------------------------------------------------------------------
..................................................................................................................................CCTTTGTAGGCGACGAGAACCCGA................................................................................................2411.0010.00-1.00------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TTGTAGGCGACGAGAACCCGTGTT.............................................................................................2411.007.00------------------------------------------------1.00-------------------------------------------------------------------
..................................................................................................................................CCTTTGTAGGCGACGAGAACCCGTAA..............................................................................................2611.008.00-----------------------------------------------------------------------------------------1.00--------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCCGT...............................................................................................2311.0012.00-------------------------------------------1.00------------------------------------------------------------------------
.................................................................................................................................................................................TTCTCTCTCTCACCTACAAAC....................................................2111.001.00-1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCAGT................................................................................................2211.002.00------------------------------------1.00-------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGTAT..............................................................................................2411.00174.00------------------------------------------------------------------------------------------------------------1.00-------
..................................................................................................................................CCTTTGTAGGCGACGAGAACA...................................................................................................2111.005.00--------------------------------------------------------------------------------------1.00-----------------------------
......................................................................................................................................................................................TCTCTCACCTACAAATAG..................................................181.000.00--------------------------------------------1.00-----------------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCGAAA..............................................................................................2511.00114.00---------------------------------------1.00----------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGTTT..............................................................................................2411.00174.00----------------------------1.00---------------------------------------------------------------------------------------
...............................................................................................................................................................................................TACAAACAGGTGAAGTTGG........................................1911.001.00---------------------------------------------------1.00----------------------------------------------------------------
..................................................................................................................................CCTTTGTAGGCGACGAGAACCAT.................................................................................................2311.008.00-1.00------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TACAAACAGGTGAAGTCGG........................................191.000.00---------------------------------------------------1.00----------------------------------------------------------------
................................................................................................................................................................................TTTCTCTCTCTCACCTACAAACAG..................................................2411.001.00------1.00-------------------------------------------------------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCGATA..............................................................................................2511.00114.00-1.00------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AGAAATGATGACATAACAGA............2011.001.00-----------1.00--------------------------------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCTTGA..............................................................................................2411.0012.00---------------1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TACAAACAGGTGAAGTTGCGTA.....................................221.000.00-----------------------------------------------------------------------------------------------------------1.00--------
...............................................................................................................................................................................................................................TGATGACATAACAGATGGACGCC....231.000.00-------------------------------------------------------------------1.00------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAGC....................................................................................................191.000.00--------------------1.00-----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GAAGTTGGTGAACATCAGAAA...........................2111.001.00------------------------------------------------------------------------------------1.00-------------------------------
.................................................................................................................................TCCTTTGTAGGCGACGT........................................................................................................171.000.00--------------------1.00-----------------------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCT.................................................................................................2111.0012.00-1.00------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................GTTTCTCTCTCTCACCTACAAAC....................................................2311.001.00--------------------------------------------------1.00-----------------------------------------------------------------
..................................................................................................................................CCTTTGTAGGCGACGAGAATCC..................................................................................................221.000.00----------------------------------1.00---------------------------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCAA.................................................................................................2211.0024.00----1.00---------------------------------------------------------------------------------------------------------------
..................................................................................................................................CCTTTGTAGGCGACGAGAAT....................................................................................................201.000.00-1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGGGA..............................................................................................2411.0072.00-----------------------------------------1.00--------------------------------------------------------------------------
...............................................................................................................................................................................GTTTCTCTCTCTCACCTACAAACA...................................................2411.001.00-----------------1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCCT................................................................................................2211.0012.00---1.00----------------------------------------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCGCG...............................................................................................2311.0072.001.00-------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GAAGTTGGTGAACATCAGAA............................2011.001.00--------------------------1.00-----------------------------------------------------------------------------------------
....................................................................................................................................TTTGTAGGCGACGAGAACCCTT................................................................................................2211.0012.001.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CTTTGTAGGCGACGAGAACCCGTTTA.............................................................................................2611.0045.00-1.00------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................TAACAGATGGAAATCCT..1711.001.00-------------------------------------------------1.00------------------------------------------------------------------
..................................................................................................................................................................................................................................TGACATAACAGATGG.........1530.330.33------------------------------------------------------------------------------------------------------------------0.33-
.......................................................................................................................................................................................................................ATCAGAAATGATGACAT..................1730.330.33--------------------------------------------------0.33-----------------------------------------------------------------
.....................................................................................................................................................................................................................ACATCAGAAATGATGA.....................1640.250.25-------------------------------------------------------------------------------------------------------------------0.25

Antisense strand
CGGTATGTGCTCTAGAAGGGAGAGCCCCAGCAGTACCCAGTTTCGGCTTAGATGTGTTTGTCATCTAGAGTGTGGAAGGGAAGGCCGTAGCATCTGGTGACCTGTGTGTTCTTTGTGTCATTTAGCGTTTCCTTTGTAGGCGACGAGAACCCGTGCCTGGTGTGTAATAATCACTGTTTCTCTCTCTCACCTACAAACAGGTGAAGTTGGTGAACATCAGAAATGATGACATAACAGATGGAAATCCTAA
....................................................................................................................................((((((((.((.((((..(((....))).(((.......)))........)))))).)))))))).....................................................
...............................................................................................................................128.....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR206942(GSM723283)
other. (brain)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR206939(GSM723280)
other. (brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR206940(GSM723281)
other. (brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR206941(GSM723282)
other. (brain)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR037906(GSM510442)
brain_rep3. (brain)		mjTestesWT2()
Testes Data. (testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR306526(GSM750569)
19-24nt. (ago2 brain)		SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		mjTestesWT1()
Testes Data. (testes)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)		SRR095855BC5(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)		SRR095853(SRX039174)
sequencing of miRNA from wild type and diseas. (heart)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR095855BC8(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR095855BC10(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR306543(GSM750586)
19-24nt. (ago2 brain)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
...........................................................................................................................................GCGACGAGAACC................................................................................................... 12100.100.10---------------------------------------------------0.10----------------------------------------------------------------