ID: uc011mbg.9
GENE: SPTAN1(9)
chr9:131343001-131343250+


(1)
AGO1.ip 		(5)
AGO2.ip 		(5)
B-CELL 		(13)
BRAIN 		(19)
BREAST 		(31)
CELL-LINE 		(6)
CERVIX 		(3)
FIBROBLAST 		(7)
HEART 		(6)
HELA 		(4)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(40)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
TTCTAGATTAATTAAAACAGGCCATCCCTTTTATATTGAACATGCACATACAAGTGAATGTTGTTTTTCCCCTTTTGCAAATCGGAAAAAAGGCCTGAAGATTAGCACTAGGATTAGGAATTCCAGGATAGCTGTTCTGTCTGCCTCGGAGGCATTGGGGCTGACCTCATCTCCCTGACCATGTCTCCTATGCCCCCAAGCTGACCGTCCTTTCCGAGGAGAGAGCGGCGCTGCTGGAGCTGTGGGAGCT
...................................................................................................................................................((.(((((.(((((.....(((......)))....))).)).))))).)).....................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189782SRR040018(GSM532903)
G701N. (cervix)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR038854(GSM458537)
MM653. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029126(GSM416755)
143B. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189786SRR553576(SRX182782)
source: Testis. (testes)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189783SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR040010(GSM532895)
G529N. (cervix)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR189787SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		TAX577743(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR038853(GSM458536)
MELB. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)		SRR040033(GSM532918)
G603T. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR040032(GSM532917)
G603N. (cervix)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR040014(GSM532899)
G623N. (cervix)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
.................................................................................................................................................TCGGAGGCATTGGGGCTGACC....................................................................................21155.0055.0016.002.003.001.001.003.001.001.002.001.00----2.00---2.001.00-1.00----2.001.00----1.00-------2.00-----1.001.001.001.00---1.00------1.00------------------------------------------1.00---1.00--1.001.00---1.00---------------------1.00-----
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCT...................................................................................22126.0026.00-4.001.002.00-2.00-1.001.00---1.00--1.00------1.00-----------1.00--------1.00----1.00-------------1.00---------1.001.00-------1.001.00---------1.00---1.001.00--------------1.00------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGA......................................................................................19124.0024.003.004.00-1.00--2.00------2.00------1.00--------1.00---1.00---1.00-2.00--1.00--------------1.00-------------------------------1.00----1.00--------------1.00--------------------------1.00------
..................................................................................................................................................................................CCATGTCTCCTATGCCCCCAAGT.................................................23116.002.00-3.00------1.001.00--1.00----1.00-------------1.00------1.00---------------------1.00----------------1.00---------------------------------------1.00--------1.001.00--1.00--------1.00---
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTA..................................................................................23114.0026.005.00----------------1.00-1.001.00----1.00------------1.00-----------1.00--1.00--2.00--------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGAC.....................................................................................20114.0014.003.00---4.001.00---------1.00--------1.00-----------------------------------------1.00----------------1.00-1.00-----1.00---------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTT..................................................................................23113.0026.00-5.001.00-1.00--1.00-1.00-1.00-------1.00-----------------------------------------1.00---------------------------------------------------1.00-----------------------------
..................................................................................................................................................................................CCATGTCTCCTATGCCCCCAAGA.................................................2319.002.00-----------3.00----4.00------------------------------------------------------------------------------------1.00--------------------1.00--------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACC....................................................................................2218.008.002.00-2.00-----1.00------------------1.00-----------------------1.00----------------1.00--------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACA....................................................................................2118.0014.002.00----1.00--------1.00--------1.00---------------------------------------1.00-----------------------------------1.00----------------1.00--------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTTT.................................................................................2417.0026.00---1.00--1.00------1.00--------1.00----1.001.00---------------------------------------------1.00--------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCAA..................................................................................2317.0055.00-3.00------1.00----------------1.00--2.00------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCT...................................................................................2315.005.00-2.00-1.00-------------------------------------------1.00--------------------------------------------------------1.00--------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTG.......................................................................................1814.004.00---------------1.00-1.00--------------------------2.00--------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACT....................................................................................2114.0014.00-1.00--------------------------------------------1.00----------1.00-----------------------------1.00-------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTAT.................................................................................2414.0026.00----------3.00------------------------------------------------1.00-----------------------------------------------------------------------------------
...................................................................................................................................................GGAGGCATTGGGGCTGACCTCATCTCCCTGA........................................................................3114.004.00----------4.00------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGTTT....................................................................................2113.004.00----2.00-------------------------------------------------------------------------------------------------------------------------------------1.00----
..................................................................................................................................................................................CCATGTCTCCTATGCCCCCAAGTT................................................2413.002.00---------------------2.00---------------------------1.00---------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCTT..................................................................................2413.005.001.00-1.00---------------------------------------------------------------------------------------------------------------1.00----------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCA...................................................................................2213.0055.00-------1.00------------------------------------------------------------------------------------------------------------------------1.00----1.00---------
................................................................................................................................................CTCGGAGGCATTGGGGCTGAC.....................................................................................2113.003.001.00-----------------------------1.00-----------------------------------------------------------------------------------------1.00----------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTAA.................................................................................2413.0026.00---1.00-------------------------------2.00-----------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTTA.................................................................................2413.0026.00---1.00----------1.00----------1.00---------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCAT..................................................................................2312.0055.00---------------------------------1.00------------------------------------------------------------------1.00------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGAAC....................................................................................2112.0024.00----------------------1.00-1.00----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................TTTCCGAGGAGAGAGCGGCGCTGCTGGAG...........2912.002.00----------------------------------------------------------2.00------------------------------------------------------------------------------------
...............................................................................................................................................CCTCGGAGGCATTGGGGCTGA......................................................................................2112.002.002.00----------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGAAA....................................................................................2112.0024.00----1.00-----------------------------------------------------------------------------------1.00------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACG....................................................................................2112.0014.00-------2.00---------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGA......................................................................................2012.002.001.00-----------------------------------------------------------------------------------------------------------1.00----------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACAA...................................................................................2212.0014.00------------------------------------1.00-------------------------------------------1.00--------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGAA.....................................................................................2012.0024.00-------------------------------------------------------------------------------1.00---------------------------------------------------1.00-----------
.................................................................................................................................................TCGGAGGCATTGGGGCTGAAAT...................................................................................2212.0024.00---------2.00-------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTCT.................................................................................242.000.001.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GAGCGGCGCTGCTGGAGCTGTGGGAGC.2712.002.00------------------------------------------------------2.00----------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGAG.....................................................................................2012.0024.00------------------------1.00----1.00-----------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCTA..................................................................................2412.005.002.00----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................CGGAGGCATTGGGGCTGACCTC..................................................................................2212.002.00-------------------------------------------------------2.00---------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGATTT...................................................................................2212.0024.00------2.00----------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCATGTCTCCTATGCCCCCAAG..................................................2212.002.00------------1.00-------------1.00--------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGGAGAGAGCGGCGCTGCTGGAGCT.........2512.002.00-----------------------------------------2.00-----------------------------------------------------------------------------------------------------
.................................................................................................................................................................................ACCATGTCTCCTATGCCCCCAAT..................................................2311.001.00-----------------------------------------------------------1.00-----------------------------------------------------------------------------------
..................................................................................................................................................................................CCATGTCTCCTATGCCCCCAAGTA................................................2411.002.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACAT...................................................................................2311.003.00----------------------------------1.00------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................CCAAGCTGACCGTCCTG......................................171.000.00-------------------------------------------------------------------1.00---------------------------------------------------------------------------
..............................................................................................................GGATTAGGAATTCCAGGATAGCTGT...................................................................................................................2511.001.00-----------------------------------------------------------------------------------------------------------------------------1.00-----------------
...........................................................................................................................................................................................................................AGAGAGCGGCGCTGCTGG.............1811.001.00---------------------------------------------------------------------1.00-------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGAAT....................................................................................2111.0024.001.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CATGTCTCCTATGCCCCCAAG..................................................2111.001.00---------------------------------------------------------------------------------------------------------------------------------------1.00-------
..........................................................TGTTGTTTTTCCCCTTTTGCAAATCGG.....................................................................................................................................................................2711.001.00-----------------------------------------------------------------1.00-----------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGCCC....................................................................................2111.004.00------------------1.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GAGAGAGCGGCGCTGCTGGA............2011.001.00-----------------------------------------------------------------------------------------------1.00-----------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGGCCC...................................................................................2211.004.00----------------------------------------------------1.00------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTAAT................................................................................2511.0026.001.00----------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGAT.....................................................................................2111.002.00--------------------------------------------------------------------------------------------------------------------------------------------1.00--
.................................................................................................................................................................................ACCATGTCTCCTATGCCCCCAA...................................................2211.001.00---------------------------------------------------------------------------------------------------------1.00-------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTAC.................................................................................2411.0026.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCTAT.................................................................................2511.005.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CGTCCTTTCCGAGGAGAGAGCGGCGCTGCT...............3011.001.00---------------------------------------------1.00-------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTTACA....................................................................................2111.001.00-------------------------------------------------------------------------------------------------------------------------1.00---------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGTAA....................................................................................221.000.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GAGGAGAGAGCGGCGCTGCTGGAGCTGTGG.....3011.001.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACTA...................................................................................2211.0014.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTTC.................................................................................2411.0026.00-------------------------------------------1.00---------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTAA......................................................................................201.000.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCTTT.................................................................................2511.005.001.00----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................CGGAGGCATTGGGGCTGA......................................................................................1811.001.00----------------------------------------------------------------------------------------------------------------------1.00------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTTTT................................................................................2511.0026.00------------------------------1.00----------------------------------------------------------------------------------------------------------------
..................................................................................................................................GCTGTTCTGTCTGCCTCGGAGGCATTG.............................................................................................2711.001.00------------------------------------------------------------------------------------------1.00----------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGATA....................................................................................2111.0024.00----------------------------------------------------------------------1.00------------------------------------------------------------------------
................................................................................................................................................................................................................................GCGGCGCTGCTGGAGCTGTG......2011.001.00---------------------------------------------------------------------------------------------1.00-------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACT....................................................................................2211.003.00------------1.00----------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTAAC................................................................................2511.0026.00-----------------------------------------------------------------------------------------------------------------------1.00-----------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCA...................................................................................2311.008.001.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TTCCGAGGAGAGAGCGGCGCTGCTGG.............2611.001.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACG....................................................................................2211.003.00---------------------------------------------------------------------------1.00-------------------------------------------------------------------
...........................................................................TGCAAATCGGAAAAAAGGCCTGAAGATT...................................................................................................................................................2811.001.00------------------------------------1.00----------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGCCC....................................................................................221.000.00------------------------------------------1.00----------------------------------------------------------------------------------------------------
.......TTAATTAAAACAGGCGTCG................................................................................................................................................................................................................................191.000.00--------------------------------1.00--------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCTCTT................................................................................261.000.00---------------------------------------------------1.00-------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGAA.....................................................................................2111.002.00------------------------------------------------------------------------------1.00----------------------------------------------------------------
..................................................................................................................................................CGGAGGCATTGGGGCTGAT.....................................................................................1911.001.00------1.00----------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................TCCTTTCCGAGGAGAGAGCGGCGCTGCTGGAGC..........3311.001.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCTAAC................................................................................2611.005.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GAGGAGAGAGCGGCGCTGCTGG.............2211.001.00--------------------------------------------------------------------------------------------------1.00--------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTAAA................................................................................2511.0026.00-----------------1.00-----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................TCCTTTCCGAGGAGAGAGCG.......................2011.001.00---------------------------------------------1.00-------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCT........................................................................................1711.001.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................CCTCGGAGGCATTGGGGCTGAATT...................................................................................2411.002.001.00----------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTCA.................................................................................2411.001.00----------------------------------------------------------------------------1.00------------------------------------------------------------------
.................................................................................................................................................................................ACCATGTCTCCTATGCCCCCAAG..................................................2311.001.00---------------------------------------------------------------------------------------------------------------------------1.00-------------------
...................................................................................................................................................................ACCTCATCTCCCTGACCATCTC.................................................................221.000.00----------------------------------------------------1.00------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGT......................................................................................201.000.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................CCCCAAGCTGACCGTCCTTTC....................................2111.001.00----------------------------------------------------------------------------------------------------------------------------1.00------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACAGAA.................................................................................2411.0014.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................................................CGGAAAAAAGGCCTGAAGAT....................................................................................................................................................2011.001.00-----------------------------------------------------------------------1.00-----------------------------------------------------------------------
............................................................................................................TAGGATTAGGAATTCCAGGATAGC......................................................................................................................2411.001.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CCGAGGAGAGAGCGGCGCTGCTGG.............2411.001.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTATT................................................................................2511.0026.00--------------------------------------------------1.00--------------------------------------------------------------------------------------------
................................................................................................................................................................................................................CCTTTCCGAGGAGAGAGCGGCGCTG.................2511.001.00------------1.00----------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GAGGAGAGAGCGGCGCTGCT...............2011.001.00----------------------------------------------------------------------------------------------------------------------------------------------1.00
....................................................................................................................................................................................................................TCCGAGGAGAGAGCGGCGCTGCTGGAGC..........2811.001.001.00----------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTTG......................................................................................1911.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCATGTCTCCTATGCCCCCACGT.................................................231.000.00---------------------------------------------------------------------------------------------------------------------------------------------1.00-
...........................................................................................................................................................................................................................AGAGAGCGGCGCTGCTGGAGCTGTG......2511.001.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................AAAAAGGCCTGAAGATGC..................................................................................................................................................181.000.00------------------------------------------------------------------------------------------------------1.00----------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGATCTA..................................................................................2311.0024.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................AAAAAGGCCTGAAGATTCC.................................................................................................................................................191.000.00------------------------------------------------------------------------------------------------------------------------------------1.00----------
.............................................................................................................................................................................................................................AGAGCGGCGCTGCTGG.............1621.001.00--------------------------------------------------------------------------------------------------------------------------------------1.00--------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACTATA.................................................................................2411.0014.001.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGAGGCATTGGGGCTGACCT...................................................................................2011.001.00------------------------------1.00----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................GCGGCGCTGCTGGAGC..........1640.500.50--0.50--------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGAGCGGCGCTGCTGGA............1720.500.50-------------------------------------------------------------0.50---------------------------------------------------------------------------------
........................................................................................................................................................................................................................................GCTGGAGCTGTGGGAGC.1750.400.40--0.40--------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................TGCTGGAGCTGTGGGA...1670.140.14--0.14--------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................TAGGATTAGGAATTC...............................................................................................................................1590.110.11--------------------------------0.11--------------------------------------------------------------------------------------------------------------

Antisense strand
TTCTAGATTAATTAAAACAGGCCATCCCTTTTATATTGAACATGCACATACAAGTGAATGTTGTTTTTCCCCTTTTGCAAATCGGAAAAAAGGCCTGAAGATTAGCACTAGGATTAGGAATTCCAGGATAGCTGTTCTGTCTGCCTCGGAGGCATTGGGGCTGACCTCATCTCCCTGACCATGTCTCCTATGCCCCCAAGCTGACCGTCCTTTCCGAGGAGAGAGCGGCGCTGCTGGAGCTGTGGGAGCT
...................................................................................................................................................((.(((((.(((((.....(((......)))....))).)).))))).)).....................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189782SRR040018(GSM532903)
G701N. (cervix)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR038854(GSM458537)
MM653. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029126(GSM416755)
143B. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189786SRR553576(SRX182782)
source: Testis. (testes)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189783SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR040010(GSM532895)
G529N. (cervix)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR189787SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		TAX577743(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR038853(GSM458536)
MELB. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)		SRR040033(GSM532918)
G603T. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR040032(GSM532917)
G603N. (cervix)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR040014(GSM532899)
G623N. (cervix)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
........................................................................................................................................................................................................CTGACCGTCCTTTCCAACG............................... 191.000.00-------------------------------------1.00---------------------------------------------------------------------------------------------------------
...................................................................................GGAAAAAAGGCCTGAACG..................................................................................................................................................... 181.000.00----------------------------------------------------------------------------------------------------------1.00------------------------------------
.................................................................................................................................................................TGACCTCATCTCCCTAGG....................................................................... 181.000.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------------
............................................................TTGTTTTTCCCCTTTTCAG........................................................................................................................................................................... 191.000.00---------------------------------------------------------------------------------------------------------------------------------1.00-------------
.............................................................TGTTTTTCCCCTTTTCGGA.......................................................................................................................................................................... 191.000.00------------------------------------------------------------------------------------1.00----------------------------------------------------------
.................................................................................................................................AGCTGTTCTGTCTGCCTCTTG.................................................................................................... 211.000.00----------------------------------------------------------------1.00------------------------------------------------------------------------------
................................................................................................................................................................................GACCATGTCTCCTATGCCCCCA.................................................... 2211.001.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................AAAAAAGGCCTGAAGTAAA.................................................................................................................................................. 191.000.00--------------------------------------------------------------------------------------1.00--------------------------------------------------------
...................................................AAGTGAATGTTGTTTTTTCT................................................................................................................................................................................... 201.000.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------