ID: uc010zyo.2
GENE: RNF114(2)
chr20:48562473-48562722+


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(7)
B-CELL 		(3)
BRAIN 		(15)
BREAST 		(24)
CELL-LINE 		(2)
CERVIX 		(5)
HEART 		(6)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(1)
OTHER 		(2)
RRP40.ip 		(14)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
GATTACAGGCGTAAACCACCACGCCCGGCCAGCTGAGCTGTTATTTTCACAACACTTGACCTGAGTCTGAAGTGATCATCAGCATCCTTATCATTACACATTTGGTGAGCTTTGCTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGGAATGTTCCAAACCGTTACACCTTTCCTTGTCCTTACTGTCCTGAGAAGA
....................................................................................................................................................(((.(((((...((((((((((......)))))).))))....))))))))...................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR189782DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)		DRR001483(DRX001037)
Hela long cytoplasmic cell fraction, control. (hela)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189785SRR343336TAX577739(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR040043(GSM532928)
G428T. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343334SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR038858(GSM458541)
MEL202. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR029130(GSM416759)
DLD2. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR189786TAX577580(Rovira)
total RNA. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR189784SRR444066(SRX128914)
Sample 23cDNABarcode: AF-PP-339: ACG CTC TTC . (cell line)		SRR343335SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR038856(GSM458539)
D11. (cell line)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191527(GSM715637)
128genomic small RNA (size selected RNA from . (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577744(Rovira)
total RNA. (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577746(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		TAX577589(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR015447(SRR015447)
nuclear small RNAs. (breast)
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCC....................................................83139.0039.0034.00-3.00---2.00--------------------------------------------------------------------------------------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCC....................................................84122.0022.0020.00-2.00------------------------------------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAGA....................................................................................21115.0015.00-1.00-2.004.00---1.00------2.00-----1.001.00--------1.00----------------1.00------1.00-------------------------------------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTC.....................................................83114.0014.0013.00------1.00-------------------------------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAGAA...................................................................................22113.0013.00---2.00-2.00--1.00-------3.00-----1.00---2.00------------------1.00--------------------------------1.00--------------
..................................................................................................................................................AATGGAAAGGTACTCACAGAAA..................................................................................22110.0010.00--------1.00----2.00---------------1.00--------1.00---------------------1.00--1.00----------1.00--------------1.00--1.00
..................................................................................................................................................AATGGAAAGGTACTCACAGAA...................................................................................2119.009.00--------------------1.00---2.00---------------1.001.00-------1.00---------1.00----1.00---------------------1.00------
...................................................................................................................................................................................TTCCTGTGTTTCACCTTCCAG..................................................2119.009.00-8.00--------------------------------------------------1.00----------------------------------------
.................................................................................................................GCTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGT.................................................888.000.006.00------2.00-------------------------------------------------------------------------------------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTT......................................................8217.007.007.00--------------------------------------------------------------------------------------------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAG..................................................8617.007.00--7.00------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCAG..................................................2017.007.00-6.00--------1.00----------------------------------------------------------------------------------
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCAGT.................................................2116.007.00-4.00-------------------------------------1.00--------------------------------------------------1.00--
...................................................................................................................................................ATGGAAAGGTACTCACAGAAAA.................................................................................2216.006.00--------1.00---1.00---------------------2.00-----------------------------------------1.00-----------1.00----
..................................................................................................................................................AATGGAAAGGTACTCACAGA....................................................................................2016.006.00---------1.00---1.00---------------1.00-----------------------------------1.00--------------1.00----------1.00-
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCT.......................................................8116.006.00--6.00------------------------------------------------------------------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAG..................................................8515.005.005.00--------------------------------------------------------------------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTC.....................................................8215.005.005.00--------------------------------------------------------------------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCA...................................................8415.005.005.00--------------------------------------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAGAAA..................................................................................2315.005.00-----1.00------1.00--------1.00-----------------------------------------------1.00------------1.00----------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAGTT..............................................................................2414.004.00---------------1.00-------2.00----1.00----------------------------------------------------------------
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCAGA.................................................2114.007.00------------------------------------------1.00---1.00---------------1.00--------------1.00---------------
....................................................................................................................CCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCC....................................................8214.004.004.00--------------------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAGT...............................................................................2314.004.00------------------------------2.00------1.00----------------------------1.00--------------------------
...................................................................................................................................................ATGGAAAGGTACTCACAGAAAAGT...............................................................................2414.004.00----3.00------------------------------------------------1.00---------------------------------------
...................................................................................................................................................ATGGAAAGGTACTCACAG.....................................................................................1813.003.00----------1.00---2.00------------------------------------------------------------------------------
................................................................................................................................................TTAATGGAAAGGTACTCACAGA....................................................................................2213.003.00---3.00-----------------------------------------------------------------------------------------
.....................................................................................................................................................................................CCTGTGTTTCACCTTCCAG..................................................1913.003.00-3.00-------------------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAA.................................................................................2113.003.00----------------------------------------------------------1.00--------1.00---------------1.00---------
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCT.......................................................8013.003.003.00--------------------------------------------------------------------------------------------
...................................................................................................................................................ATGGAAAGGTACTCACAGAA...................................................................................2013.003.00------------1.00------------------1.00-----------1.00-------------------------------------------------
................................................................................................................................................TTAATGGAAAGGTACTCACAGAA...................................................................................2313.003.00---3.00-----------------------------------------------------------------------------------------
........................................TTATTTTCACAACACTATG...............................................................................................................................................................................................193.000.00-----------3.00---------------------------------------------------------------------------------
...............................................................................................................................................................................................................CCAAACCGTTACACCTTTCCTTG....................2313.003.00-------------------2.00-------------------------------------------------------------------1.00-----
.................................................................................................................................................TAATGGAAAGGTACTCACAG.....................................................................................2013.003.00-2.00---1.00---------------------------------------------------------------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGA.................................................8612.005.002.00--------------------------------------------------------------------------------------------
..........................................................................................................................TGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCC....................................................7612.002.00-------2.00-------------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAGTTT.............................................................................2512.002.00---------2.00-----------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAA..................................................................................2012.002.00---------------------------------------------------1.00-----1.00-----------------------------------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACC........................................................8012.002.00------2.00--------------------------------------------------------------------------------------
...................................................................................................................................................................................TTCCTGTGTTTCACCTTCCAGA.................................................2212.009.00-----------------------------------------------------------------------1.00---------1.00-----------
..................................................................................................................................................AATGGAAAGGTACTCACAG.....................................................................................1912.002.00-1.00-----------------------------------------------------------------------1.00-------------------
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCAGTT................................................2212.007.00--------------------1.00---------------------------------------------------1.00--------------------
...................................................................................................................................................ATGGAAAGGTACTCACAGAAAAGTTT.............................................................................2611.001.00--------------------------------1.00------------------------------------------------------------
...........................................................................................................................................................................................................................ACCTTTCCTTGTCCTACTG............191.000.00----------1.00----------------------------------------------------------------------------------
..................................................................................................................................................AATGGAAAGGTACTCACAGAAAAA................................................................................241.000.00-------------------------------------------------------------------------------------1.00-------
.................................................................................................................................................TAATGGAAAGGTACTCACAGAGA..................................................................................2311.0015.00---------1.00-----------------------------------------------------------------------------------
........................................................................................................................................................................AGTTTTCTTTTTTCCGGTT...............................................................191.000.00-------------------------1.00-------------------------------------------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACT.....................................................................................................................1811.001.00--------------1.00------------------------------------------------------------------------------
.........................................................................................................................................................................................................AATGTTCCAAACCGTTACACCTTTCC.......................2611.001.00--------------------------------------------1.00------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAG................................................................................2211.001.00---------1.00-----------------------------------------------------------------------------------
...TACAGGCGTAAACCACCACGCCCGGCCC...........................................................................................................................................................................................................................281.000.00-------------------------1.00-------------------------------------------------------------------
..................................................................................................................................................AATGGAAAGGTACTCACAGAAG..................................................................................2211.009.00------------------1.00--------------------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCATAGA....................................................................................211.000.00----1.00----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................TTCCAAACCGTTACACCTTTCCTTGA...................261.000.00-----------------------------------1.00---------------------------------------------------------
.............AACCACCACGCCCGGCCAGCTCCAC....................................................................................................................................................................................................................251.000.00--------------------------------------------------------1.00------------------------------------
...................................................................................................................................................................................................................................TTGTCCTTACTGTCCTGAGAAG.2211.001.00--------------------------------------------------1.00------------------------------------------
......................GCCCGGCCAGCTGAGGCGG.................................................................................................................................................................................................................191.000.00----------------------------1.00----------------------------------------------------------------
...................................................................................................................................................................................................................................TTGTCCTTACTGTCCTGAGA...2011.001.00---1.00-----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TTTCCTTGTCCTTACTGTCCTGA.....2311.001.00----------------------------------------------------------------------1.00----------------------
....................................................................................................................................................TGGAAAGGTACTCACAGA....................................................................................1811.001.00---------------------------------------------------------------------------1.00-----------------
............................................................................................................................GAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTG...............................................................6311.001.00------1.00--------------------------------------------------------------------------------------
.................................................................................................................GCTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCT.......................................................8211.001.00-------1.00-------------------------------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAGAAAA.................................................................................2411.001.00--------1.00------------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAGTTTTCTT.........................................................................2911.001.00---------------------------1.00-----------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAA...................................................................................1911.001.00-----1.00---------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AAACCGTTACACCTTTCCTTGTCC.................2411.001.00------------------------------------------------------------------------------------1.00--------
...................................................................................................................................................................................TTCCTGTGTTTCACCTTCCAAT.................................................221.000.00-----1.00---------------------------------------------------------------------------------------
....................................................................................................................CCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGA.................................................851.000.00------1.00--------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTCCTTGTCCTTACTGTCCTGAGAAGA2711.001.00------------------------------------------------------1.00--------------------------------------
................................................................................................................TGCTCCTTTTTGGAGTGTACTGTGGTTG..............................................................................................................2811.001.00-----1.00---------------------------------------------------------------------------------------
................................CTGAGCTGTTATTTTGGGG.......................................................................................................................................................................................................191.000.00------------------------------------1.00--------------------------------------------------------
...................................................................................................................................................................................TTCCTGTGTTTCACCTTCCAGT.................................................2211.009.00-1.00-------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TTTCCTTGTCCTTACTGTC.........1911.001.00--------------------------------------------------------------------1.00------------------------
..................................................................................................................................................AATGGAAAGGTACTCACAA.....................................................................................191.000.00---------------------------------1.00-----------------------------------------------------------
.........................................................................................................................................................................................................................ACACCTTTCCTTGTCCTTACTGTCCG.......261.000.00---------------------------1.00-----------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGTGTTTCACCTTCCAGT.................................................231.000.00-----1.00---------------------------------------------------------------------------------------
...................................................................................................................................................ATGGAAAGGTACTCACAGA....................................................................................1911.001.00------------------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCA...................................................1920.500.50------------------0.50--------------------------------------------------------------------------
.......................................................................................................................................................................................................................TTACACCTTTCCTTG....................1590.220.22-------------------0.11---------------0.11---------------------------------------------------------

Antisense strand
GATTACAGGCGTAAACCACCACGCCCGGCCAGCTGAGCTGTTATTTTCACAACACTTGACCTGAGTCTGAAGTGATCATCAGCATCCTTATCATTACACATTTGGTGAGCTTTGCTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGGAATGTTCCAAACCGTTACACCTTTCCTTGTCCTTACTGTCCTGAGAAGA
....................................................................................................................................................(((.(((((...((((((((((......)))))).))))....))))))))...................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR189782DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)		DRR001483(DRX001037)
Hela long cytoplasmic cell fraction, control. (hela)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189785SRR343336TAX577739(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR040043(GSM532928)
G428T. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343334SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR038858(GSM458541)
MEL202. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR029130(GSM416759)
DLD2. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR189786TAX577580(Rovira)
total RNA. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR189784SRR444066(SRX128914)
Sample 23cDNABarcode: AF-PP-339: ACG CTC TTC . (cell line)		SRR343335SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR038856(GSM458539)
D11. (cell line)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191527(GSM715637)
128genomic small RNA (size selected RNA from . (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577744(Rovira)
total RNA. (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577746(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		TAX577589(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR015447(SRR015447)
nuclear small RNAs. (breast)
............AAACCACCACGCCCGTGT............................................................................................................................................................................................................................ 182.000.00-----------------2.00---------------------------------------------------------------------------
....................................................................................................................................................................................................................................TGTCCTTACTGTCCTGCA.... 181.000.00-------------------------------------------------------------------------------1.00-------------
............AAACCACCACGCCCGCGG............................................................................................................................................................................................................................ 181.000.00-------------------------------------------------------------1.00-------------------------------
..................................................................................................................................ACTGTGGTTGAAGTTCTAA..................................................................................................... 191.000.00---------------------------------1.00-----------------------------------------------------------
....................................................................................................................................................................................................................CCGTTACACCTTTCC....................... 1511.001.00-----------------------------------------------1.00---------------------------------------------
............AAACCACCACGCCCGTGG............................................................................................................................................................................................................................ 181.000.00--------------------------------1.00------------------------------------------------------------
............AAACCACCACGCCCGGGTG........................................................................................................................................................................................................................... 191.000.00-----------------1.00---------------------------------------------------------------------------