ID: uc010yvj.19
GENE: INPP4A(19)
chr2:99181903-99182152+


(2)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(2)
AGO3.ip 		(15)
B-CELL 		(13)
BRAIN 		(10)
BREAST 		(42)
CELL-LINE 		(4)
CERVIX 		(1)
FIBROBLAST 		(3)
HEART 		(3)
HELA 		(6)
LIVER 		(3)
OTHER 		(2)
RRP40.ip 		(13)
SKIN 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
GTGGCTGTGGGATTTCAGAGGCATTGTTGACTCACAGAGGAGTGAGTTGCAGGGGAAGAGGCTCAGAGACTCCCCCTCCACCAGAGCCACACCTGCACCCCTCCTGTCACAGCCAGGCCTGGGCTTGGCTGCCTTCTGCTGAGACTGGGGAGAGTAGCAGGGCCCTCTGCCTGACAGCCCTGCCCCTCTCTCATGTCCAGGGGAGGAGCTGGCAATGCTGGAGGACATGAGCCTTGGGATCATGGACTTG
..........................................................................................................................................(((.(((..(((((((..(((((((..((.....))..)))))))..)))))))..))))))..................................................
......................................................................................................................................135..............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR189782SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577738(Rovira)
total RNA. (breast)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR038857(GSM458540)
D20. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR189786SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040035(GSM532920)
G001T. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR038862(GSM458545)
MM472. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		TAX577744(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR038860(GSM458543)
MM426. (cell line)		SRR040009(GSM532894)
G727T. (cervix)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR189784SRR038854(GSM458537)
MM653. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		TAX577740(Rovira)
total RNA. (breast)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040015(GSM532900)
G623T. (cervix)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038853(GSM458536)
MELB. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
...........................................................................................................................................TGAGACTGGGGAGAGTAGCAGG.........................................................................................22125.0025.002.002.00--1.00-8.00-2.00-2.00----1.001.00-----------1.00----1.00----------------1.001.00---------1.00-----------------------1.00---------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGGC.......................................................................................22119.0019.005.00-1.00-3.00----1.00-2.002.00--------1.00---------------1.00-----------1.00------------------------------------1.00---------1.00----------------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAGCA...........................................................................................22112.0012.00--1.00--2.00-1.00-1.002.00-1.00-------------2.00--------------1.00---------------------------1.00-------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGG........................................................................................21111.0011.004.00---1.00-------------------1.00------------------1.002.00---------------------------------1.00-----------------------1.00----------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAGCAG..........................................................................................23110.0010.003.00-1.00----2.00------------------------------------------------1.00-----------1.00--------------------------1.00-----------1.00-----------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAGCAGGGC.......................................................................................26110.0010.00-8.00-------------------1.00--------------1.00----------------------------------------------------------------------------------
............................................................................................................................................GAGACTGGGGAGAGTAGCAGGGC.......................................................................................2319.009.004.002.00-------1.00----------1.00---1.00----------------------------------------------------------------------------------------------
............................................................................................................................................GAGACTGGGGAGAGTAGCAGG.........................................................................................2119.009.00--3.00-------------------1.00-------------------1.00----------------1.00-------1.00------------1.00-----------------------1.00--------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAGC............................................................................................2119.009.00--------1.00------1.00-1.00-1.00-------1.00----1.00-------------------1.00---------1.00---1.00----------------------------------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGCAG..........................................................................................2118.008.002.00-------------1.00-------1.00----------------------------1.00------------------1.00-----1.00-----------------1.00------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGCAGGG........................................................................................2318.008.003.001.00---1.00-------------1.00-----1.00-----------------------------------------------------------------------------1.00---------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGCA...........................................................................................2016.006.00-------------------------------------1.00--------------------1.00------1.00-----------------1.00---------1.00------------1.00------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGGCAT.....................................................................................2416.0019.002.00---------------1.00-----------------------1.00-----------------------1.00-------1.00----------------------------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGCAGA.........................................................................................2215.008.004.00-------1.00--------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAG.............................................................................................2015.005.00--------------2.00-------------------------------1.00-------1.00-----------------------------------------------------1.00----------
..........................................................................................................................................CTGAGACTGGGGAGAGTAGCAGG.........................................................................................2315.005.00--1.00--2.00-------1.00--------------1.00------------------------------------------------------------------------------------------
............................................................................................................................................GAGACTGGGGAGAGTAGCAGGAA.......................................................................................2314.009.00----3.00-------------------------------------------------1.00----------------------------------------------------------------
...............................................................................................................................................ACTGGGGAGAGTAGCAGGGC.......................................................................................2014.004.004.00----------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAGCAGGGCT......................................................................................2714.0010.00------------------------------3.00---------------------------------------------------------1.00------------------------------
............................................................................................................................................GAGACTGGGGAGAGTAGCAGGG........................................................................................2214.004.00-2.001.00--------------1.00-----------------------------------------------------------------------------------------------------
............................................................................................................................................GAGACTGGGGAGAGTAGCAGGGAT......................................................................................2414.004.00-4.00---------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................ACTGGGGAGAGTAGCAGGGCCAAAA..................................................................................2513.001.003.00----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................CTGAGACTGGGGAGAGTAGCAG..........................................................................................2213.003.00--1.00-------------1.00----1.00-------------------------------------------------------------------------------------------------
..........................................................................................................................................CTGAGACTGGGGAGAGTAGCAGTAA.......................................................................................2513.003.003.00----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGCAGGGT.......................................................................................2413.008.00--------------1.00-------------------1.00-1.00----------------------------------------------------------------------------------
..............................................................................................................................................GACTGGGGAGAGTAGCAGGGCAA.....................................................................................2313.001.00---------------------------2.00----------------------1.00--------------------------------------------------------------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAGCAT..........................................................................................2313.0012.00-------------------------------1.00---1.00----------------------1.00------------------------------------------------------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAGCAGGGTT......................................................................................273.000.00-----------3.00-----------------------------------------------------------------------------------------------------------
............................................................................................................................................GAGACTGGGGAGAGTAGCAG..........................................................................................2013.003.00-----2.00---------------------------------------------------------------------------------------------------------1.00-------
..........................................................................................................................................CTGAGACTGGGGAGAGTAGCAGGGCTT.....................................................................................2713.002.003.00----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................ACTGGGGAGAGTAGCAGGGCCT.....................................................................................2213.001.003.00----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAG..........................................................................................1922.502.500.50------------0.500.50--------------------------------------------0.50----------------------------------------------------0.50------
.................................................................................................................................................TGGGGAGAGTAGCAGGGCAT.....................................................................................202.000.00--------2.00--------------------------------------------------------------------------------------------------------------
............................................................................................................................................GAGACTGGGGAGAGTAGCAGGGCTT.....................................................................................2512.009.00-----1.00-----------------------------------------1.00-----------------------------------------------------------------------
..........................................................................................................................................CTGAGACTGGGGAGAGTAGCA...........................................................................................2112.002.00-----1.00---------1.00-------------------------------------------------------------------------------------------------------
............................................................................................................................................GAGACTGGGGAGAGTAGCAGA.........................................................................................2112.003.00---------------------------------------------2.00-------------------------------------------------------------------------
.........................GTTGACTCACAGAGGGCT...............................................................................................................................................................................................................182.000.00-----------------------2.00-----------------------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGGCA......................................................................................2312.0019.00---------------------------------------------------------------------------------------------------1.00---------1.00---------
.............................................................................................................................................AGACTGGGGAGAGTAGAAT..........................................................................................192.000.00----2.00------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................CTGAGACTGGGGAGAGTAGCAGGGC.......................................................................................2512.002.00--------1.00----------------------------------------------1.00---------------------------------------------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGC............................................................................................1912.002.00-------------------------------------------------------1.00---------------1.00-----------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGGA.......................................................................................2212.0011.00-------------1.00-----1.00---------------------------------------------------------------------------------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGCAGGGC.......................................................................................2412.002.00---------1.00-----------------------------------------------------------------------1.00-------------------------------------
..........................................................................................................................................CTGAGACTGGGGAGAGTAGC............................................................................................2012.002.00--------------------------------1.00----------1.00---------------------------------------------------------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGCAGATG.......................................................................................2412.008.00-------------------------2.00---------------------------------------------------------------------------------------------
................................................................................................................................................CTGGGGAGAGTAGCAGGGC.......................................................................................1922.002.002.00----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGGCT......................................................................................2312.0019.00--1.00------------------------------------------------------1.00-------------------------------------------------------------
.................................................................................................................................................TGGGGAGAGTAGCAGGGCC......................................................................................1912.002.00--1.00-----------------1.00--------------------------------------------------------------------------------------------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAGCAA..........................................................................................2312.0012.00----------------------------------------------------1.00-------1.00----------------------------------------------------------
..........................................................................................................................................CTGAGACTGGGGAGAGTAGCAA..........................................................................................2212.002.00-------1.00-----------------------------------------------------------------1.00---------------------------------------------
..............................................................................................................................................................AGGGCCCTCTGCCTGTCGC.........................................................................191.000.00------------------1.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGA.........................................................................................2021.002.50------------------------------------------1.00----------------------------------------------------------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGCAGGGG.......................................................................................2411.008.00-----------------------------1.00-----------------------------------------------------------------------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGCAA..........................................................................................2111.006.00------------------------------------------------------------------------------------1.00----------------------------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAGTAT..........................................................................................2311.005.00-----------------------------------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGGCAA.....................................................................................2411.0019.00--------------------------------------------------------1.00--------------------------------------------------------------
..........................................................................................................................................CTGAGACTGGGGAGAGTAGA............................................................................................201.000.00---------------------------------------------------------------------------1.00-------------------------------------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAGAAT..........................................................................................2311.005.00--------------------------------------1.00--------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................AGCCTTGGGATCATGGA....1711.001.00-----------------------------------------------------------------------------------------------------1.00-----------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGG.........................................................................................2021.001.00-------------------0.50-----------------------------------------------------------------------------------------------0.50---
..........................................................................................................................................CTGAGACTGGGGAGAGTAGCAGGGCC......................................................................................2611.001.00-----------------1.00-----------------------------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGGCAAAA...................................................................................2611.0019.00---------------------------------------1.00-------------------------------------------------------------------------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAA.............................................................................................201.000.00------------------------------------------------1.00----------------------------------------------------------------------
..............................................................................................................................................GACTGGGGAGAGTAGCAGGGCATT....................................................................................2411.001.00---------------------------------1.00-------------------------------------------------------------------------------------
................................................................................................................................................CTGGGGAGAGTAGCAGGGCCCTT...................................................................................231.000.00-------1.00---------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................GCCTTGGGATCATGGACTT.1911.001.00--1.00--------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGGAA......................................................................................2311.0011.00----------------1.00------------------------------------------------------------------------------------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGCAGGT........................................................................................2311.0025.00-----------------------------------------------------1.00-----------------------------------------------------------------
..........................................................................................................................................CTGAGACTGGGGAGAGTAGCAGA.........................................................................................2311.003.00--------------------------------------------------------------------------1.00--------------------------------------------
..........................................................................................................................................CTGAGACTGGGGAGAGTA..............................................................................................1811.001.00--------------------------------------------------------------------------------------------------------------1.00--------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGGCTT.....................................................................................2411.0019.00---------------------------------------------------------------------------------------1.00-------------------------------
..........................................................................................................................................................................................................GAGGAGCTGGCAATGCTGGA............................2011.001.00-----------------------------1.00-----------------------------------------------------------------------------------------
............................................................................................................................................GAGACTGGGGAGAGTAGCAGGGCATT....................................................................................2611.009.00----------------------1.00------------------------------------------------------------------------------------------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAGCAGGGT.......................................................................................261.000.00-1.00---------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TGGGGAGAGTAGCAGGGCCCTAT..................................................................................231.000.00---1.00-------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGCAGGGCAA.....................................................................................2611.002.00------------------------------------------------------------------------------------------1.00----------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGGCATT....................................................................................2511.0019.00-------1.00---------------------------------------------------------------------------------------------------------------
...............................................................................................................................................ACTGGGGAGAGTAGCAGGGCCTAGT..................................................................................2511.001.00----------------------------------------1.00------------------------------------------------------------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGCAGGGA.......................................................................................2411.008.00----------------------------------------------------------------------------------------------------1.00------------------
...............................................................................................................................................ACTGGGGAGAGTAGCAGGGCCAA....................................................................................2311.001.00--------------------1.00--------------------------------------------------------------------------------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGCAAAG........................................................................................2311.006.00-------------------------------------------------------------------------------1.00---------------------------------------
.................................................................................................................................................TGGGGAGAGTAGCAGGGCTTT....................................................................................211.000.00-----------------------------1.00-----------------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGGCCAAA...................................................................................261.000.00-------------------------------------------------1.00---------------------------------------------------------------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAGCAGG.........................................................................................2411.001.00----------------------------1.00------------------------------------------------------------------------------------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAGCAGGT........................................................................................2511.001.00--------------------------1.00--------------------------------------------------------------------------------------------
..............................................................................................................................................GACTGGGGAGAGTAGCAGGGT.......................................................................................2111.001.00------------------------1.00----------------------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCA...........................................................................................1821.001.00-------0.50----------------------------------------------------------------------------------------------------------0.50----
...............................................................................................................................................ACTGGGGAGAGTAGCAGGGCAT.....................................................................................2211.004.00----------1.00------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................CAGCCCTGCCCCTCTCTCATGTCC....................................................2411.001.00--------------------------------------------------------------------------------------------1.00--------------------------
.................................................................................................................................................TGGGGAGAGTAGCAGGGCCAA....................................................................................2111.002.00---------------------------------------------------------------------------------------------------------1.00-------------
..............................................................................................................................................GACTGGGGAGAGTAGCAGGGC.......................................................................................2111.001.00-------1.00---------------------------------------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGGCCC.....................................................................................2411.001.00--------------------------------------1.00--------------------------------------------------------------------------------
.................................................................................................................................................TGGGGAGAGTAGCAGGGAA......................................................................................191.000.00-----------------------------------------------1.00-----------------------------------------------------------------------
.......................................................................................................................................................................................................................TGCTGGAGGACATGAGCCTTGGGACCA........271.000.00------------------1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................ACTGGGGAGAGTAGCAGGGCC......................................................................................2111.001.00---------------------------------------------------------------1.00-------------------------------------------------------
..........................................................................................................................................CTGAGACTGGGGAGAGTAGCAGGGAT......................................................................................261.000.00-----------------1.00-----------------------------------------------------------------------------------------------------
................................................................................................................................................................................................ATGTCCAGGGGAGGAGGGCT......................................201.000.00------------------1.00----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................CAATGCTGGAGGACATGA....................1811.001.00-------------------------------------------------------------------------------------------------1.00---------------------
..........................................................................................................................................CTGAGACTGGGGAGAGTAGCAAA.........................................................................................2311.002.00---------------1.00-------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................CAGCCCTGCCCCTCTCTCCTGT......................................................221.000.00----------------------------------------------------------------------------------1.00------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCATGGC.......................................................................................2221.001.00----1.00------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GACTGGGGAGAGTAGCAGGG........................................................................................2011.001.00------------1.00----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................CAGCCCTGCCCCTCTCTCATGT......................................................2211.001.001.00----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGAAA......................................................................................2321.001.00------------------------------------------------1.00----------------------------------------------------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTAGCAT..........................................................................................2111.006.00-------------1.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................................GCTGAGACTGGGGAGAGTAGA............................................................................................2111.005.00----------------------------------1.00------------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGATT......................................................................................2321.001.00---------1.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGAT.......................................................................................2221.001.00-------------------------------1.00---------------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGGCG......................................................................................2311.0019.00--1.00--------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................AGACTGGGGAGAGTAGCAGGTAT......................................................................................2321.001.00-----------------------------------------------------1.00-----------------------------------------------------------------
..............................................................................................................................................................................CAGCCCTGCCCCTCTCTCAATT......................................................221.000.00-------------------------------------------------------------------------------------------1.00---------------------------
............................................................................................................................................GAGACTGGGGAGAGTAGCAGGGCTA.....................................................................................2511.009.00-------------------------------1.00---------------------------------------------------------------------------------------
................................................................................................................................................CTGGGGAGAGTAGCAGGGCC......................................................................................2011.001.001.00----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................ATGCTGGAGGACATGAGCCTGGG.............231.000.00------------------1.00----------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TGCTGGAGGACATGAGCCTTGGGATCAT.......2811.001.00-------------1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................CTGAGACTGGGGAGAGTAGCAT..........................................................................................2211.002.00---------------------------------------1.00-------------------------------------------------------------------------------
................................................................................................................................................CTGGGGAGAGTAGCAGGGCTTT....................................................................................2221.002.00---------------------------------------------------------1.00-------------------------------------------------------------
............................................................................................................................................GAGACTGGGGAGAGTAGCAGGAAAA.....................................................................................2511.009.00------------1.00----------------------------------------------------------------------------------------------------------
...........................................................................................................................................TGAGACTGGGGAGAGTA..............................................................................................1720.500.50-----------------------------------------------------------------------------------------------------------------0.50-----
......................................................................................................................................................................................CCCCTCTCTCATGTCC....................................................1640.500.50--------------------------------------------------------------------------------------------------------------------0.250.25-

Antisense strand
GTGGCTGTGGGATTTCAGAGGCATTGTTGACTCACAGAGGAGTGAGTTGCAGGGGAAGAGGCTCAGAGACTCCCCCTCCACCAGAGCCACACCTGCACCCCTCCTGTCACAGCCAGGCCTGGGCTTGGCTGCCTTCTGCTGAGACTGGGGAGAGTAGCAGGGCCCTCTGCCTGACAGCCCTGCCCCTCTCTCATGTCCAGGGGAGGAGCTGGCAATGCTGGAGGACATGAGCCTTGGGATCATGGACTTG
..........................................................................................................................................(((.(((..(((((((..(((((((..((.....))..)))))))..)))))))..))))))..................................................
......................................................................................................................................135..............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR189782SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577738(Rovira)
total RNA. (breast)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR038857(GSM458540)
D20. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR189786SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040035(GSM532920)
G001T. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR038862(GSM458545)
MM472. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		TAX577744(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR038860(GSM458543)
MM426. (cell line)		SRR040009(GSM532894)
G727T. (cervix)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR189784SRR038854(GSM458537)
MM653. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		TAX577740(Rovira)
total RNA. (breast)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040015(GSM532900)
G623T. (cervix)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038853(GSM458536)
MELB. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
..............................................................................................................................................................AGGGCCCTCTGCCTGACCCG........................................................................ 209.000.00---8.00-------------------------------------------------------------------------------------1.00-----------------------------
..............................................................................................................................................................AGGGCCCTCTGCCTGACCAG........................................................................ 201.000.00---1.00-------------------------------------------------------------------------------------------------------------------
.................................................................................................CCCCTCCTGTCACAGCCAGGC.................................................................................................................................... 2111.001.00----------------------------------------------1.00------------------------------------------------------------------------
.............................................................................................................................................................CAGGGCCCTCTGCCTGATT.......................................................................... 191.000.00-----------------------1.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................................AGGGCCCTCTGCCTGAACCG........................................................................ 201.000.00---1.00-------------------------------------------------------------------------------------------------------------------
.....................................................................CTCCCCCTCCACCAGATT................................................................................................................................................................... 181.000.00-----------------------------------------------------------------------------1.00-----------------------------------------
..................................................................................................................................GCCTTCTGCTGAGACTGGGGAGAGT............................................................................................... 2511.001.00--------------------------------------------------------------------------------------------------1.00--------------------
..............................................................................................................................................................................CAGCCCTGCCCCTCTCTGGA........................................................ 201.000.00-----------------------------------------1.00-----------------------------------------------------------------------------
................................................................................CCAGAGCCACACCTGCA......................................................................................................................................................... 1730.330.33-------------0.33---------------------------------------------------------------------------------------------------------
.......................................................................................CACACCTGCACCCCTCC.................................................................................................................................................. 1760.170.17----------------------------------------------------------------------------------------------------------------------0.17