ID: uc004dyy.42
GENE: MED12(42)
chrX:70361533-70361782+


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(5)
AGO2.ip
(20)
B-CELL
(14)
BRAIN
(14)
BREAST
(50)
CELL-LINE
(3)
CERVIX
(2)
FIBROBLAST
(4)
HEART
(3)
HELA
(6)
LIVER
(4)
OTHER
(1)
RRP40.ip
(25)
SKIN
(1)
TESTES
(4)
UTERUS
(1)
XRN.ip

Sense strand
ATCTCAGCTACTCAAGAGGCTGAGGCAGAGAATTGCTTGAACTTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGGGACAGAGCGAGACTCCATCTCAAAAAAAAAAACGGATTGGGAAAGGAGGTTGAAGAAGGAGAAAAGTTCGACTTCAGTCTTCCACTTCCTATTTCCACCCAGTTCCAGCGCCAGGGGCTTCAGCAGACCCAGCAGCAGCAACAGACAGCAGC
...................................................................................................................................((..(((((((((((((.(((((..(((...........)))..))))).))))))).)))))).))....................................................
............................................................................................................................125........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189786GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR189784DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
TAX577740(Rovira)
total RNA. (breast)
TAX577745(Rovira)
total RNA. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR038862(GSM458545)
MM472. (cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR029128(GSM416757)
H520. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR189787GSM956925Paz8D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038855(GSM458538)
D10. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925Ago2(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038863(GSM458546)
MM603. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040015(GSM532900)
G623T. (cervix)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
GSM956925PazD5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR037936(GSM510474)
293cand1. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)
TAX577579(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR038853(GSM458536)
MELB. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR189783GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040018(GSM532903)
G701N. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
GSM956925Ago2D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR040022(GSM532907)
G575N. (cervix)
SRR029124(GSM416753)
HeLa. (hela)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGA...................................................................................................22166.0066.00---6.002.001.00-2.002.002.001.00-3.00-3.002.00--2.00-2.00--2.00-----2.001.001.001.002.00-3.00---2.00---2.00---3.00---2.00--1.001.001.001.00-1.00-1.001.00---------1.00--1.00-1.00--1.002.00-1.00----------------1.00-------------------------1.00-----------------1.00----------
.....................................................................................................................................ATTGGGAAAGGAGGTTGAAGA................................................................................................21126.0026.0013.00--1.00---1.00---------1.00----------------------1.00--------2.00----------------------------------1.00-1.00-------------------------------------1.00--1.00---1.00------------------1.001.00---
......................................................................................................................................TTGGGAAAGGAGGTTGAAGA................................................................................................20119.0019.0010.00----1.00--------1.00-----1.00-------------1.00-------3.00-----------------------1.00-----------------------------------------------------------------1.00----------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTG....................................................................................................21117.0017.00----2.00---3.00--1.001.002.00-1.00-----------1.00------------------1.00--------------------------------------------------------1.00-------------------------1.00------1.00--1.00-1.00-------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAA..................................................................................................23116.0016.00-----1.00---2.00--1.00----2.001.00-------1.00---1.00-----1.00--1.00------1.00------------------------------1.00-------1.00-------------------------------------1.00---------1.00---------------------
......................................................................................................................................TTGGGAAAGGAGGTTGAAGAAGGA............................................................................................24111.0011.003.00---------1.00--1.00---1.00---------1.00----------------1.00-------1.00-----------------1.00-----------1.00------------------------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGAAGA................................................................................................24110.0010.004.00--------------1.00--------------------2.00--------------1.00--------------------------------1.00-----1.00----------------------------------------------------------------
......................................................................................................................................TTGGGAAAGGAGGTTGAAG.................................................................................................19110.0010.006.00-------------------------1.00------------------------------------------------1.00----1.00--------------------------------------------1.00-----------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAAGGA............................................................................................2319.009.00----------3.00--1.00-----2.00---------------------------------------1.00--------------1.00------------------------1.00-------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGA...................................................................................................2118.008.00-----1.00-----1.00-----------------1.00-------1.00-----1.00------------------------------------------------------------------------------------------------------1.00-----1.001.00-
..................................................................................................................................CGGATTGGGAAAGGAGGTTGAAG.................................................................................................2318.008.002.00----1.00-2.00---1.00-----1.00----1.00------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCCAGT.................................................2417.007.00------1.00----------------------------------------------------------2.00------------------------------1.00----------1.00------------1.00---------------------------1.00------
......................................................................................................................................TTGGGAAAGGAGGTTGAAGAAG..............................................................................................2217.007.004.00---------------------------1.00--------------------------------------------------1.00--------------1.00------------------------------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAAGG.............................................................................................2217.007.002.00---------1.00---------------------------1.00-----------------1.00-------------------1.00--------------------1.00---------------------------------------------------------
....................................................................................................................................GATTGGGAAAGGAGGTTGAAGA................................................................................................2215.005.00-----2.00-1.00-------------------------1.00--------------------------------------1.00----------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAGA................................................................................................2515.005.00-----------------1.00---------2.00---------------------------1.00-------------------------------------1.00-------------------------------------------------------------
..................................................................................................................................................................................TCCACTTCCTATTTCCACCCAGT.................................................2315.005.00----------------------------------------------------------1.00-----------------------1.00-------------------------1.00--------1.00-------------------1.00-----------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTT.....................................................................................................2015.005.00---3.001.00------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGAA..................................................................................................2215.005.00------------1.00--1.00---1.00--------------------------------1.00------------------------------------------------1.00-----------------------------------------------------
......................................................................................................................................TTGGGAAAGGAGGTTGAAGAAA..............................................................................................2215.004.00-------3.00-------------------------------------------------------------------------------------------------------1.00----------1.00--------------------------------
.....................................................................................................................................ATTGGGAAAGGAGGTTGAAG.................................................................................................2015.005.001.00----1.00--1.00-----------1.00--------------------------------------------------------------------------------------------------------------------------1.00-----------
....................................................................................................................................GATTGGGAAAGGAGGTTGAAG.................................................................................................2114.004.00-----1.00-----------------3.00-----------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAG.................................................................................................1814.004.004.00----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCCA...................................................2214.004.00----1.00-2.00--------------------------------------------------------------------------------------------------------------------------------------------1.00-------
................................................................................................................................AACGGATTGGGAAAGGAGGTTG....................................................................................................2214.004.00--------------------------------------1.00-------------------------1.00-------------------------------------1.00----------------1.00-----------------------------------
......................................................................................................................................TTGGGAAAGGAGGTTGAAGAA...............................................................................................2114.004.004.00----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGT......................................................................................................1914.004.00----------------3.00------------------------1.00-----------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTAA...................................................................................................2213.005.00----3.00------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................AACGGATTGGGAAAGGAGGTTGA...................................................................................................2313.003.00-----1.00--1.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCACTTCCTATTTCCACCCAG..................................................2113.003.00------------------------3.00----------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAA.................................................................................................2413.0016.00---------------1.00-------------------------------------------------------------------1.00-------------------------------------1.00---------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCCAG..................................................2313.003.00------------------------1.00---------------------------------------------------------------------------------------------------------1.00---------1.00--------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAAGGT............................................................................................2313.007.00---3.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................ATTGGGAAAGGAGGTTGAAGAAA..............................................................................................2313.001.00----------------------------3.00------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAG.................................................................................................2412.002.00-----------------------------------------------------------------------1.00-------------------------------------1.00---------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAGATT..............................................................................................2712.005.00-------------------------1.00------------------------------------------------1.00--------------------------------------------------------------------------------
........................................................................................................................................GGGAAAGGAGGTTGAAGAAGGA............................................................................................2212.002.001.00------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGGTGG...................................................................................................2212.001.00--------1.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................TTGGGAAAGGAGGTTGAAGAAGG.............................................................................................2312.002.00--------------------------------------------------------------------------------------------------------------1.00---1.00----------------------------------------
........................................................................................................................................GGGAAAGGAGGTTGAAGAAGGAA...........................................................................................2312.002.00-----1.00------------------------1.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................ATTGGGAAAGGAGGTTGAT..................................................................................................192.000.00--------------------------------2.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACT.....................................................202.000.00------2.00----------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................TTGGGAAAGGAGGTTGAAGAAGGT............................................................................................2412.002.00-------------------------------------------------1.00--------------1.00------------------------------------------------------------------------------------------
......................................................................................TCCAGCCTGGGGGACAGAGCGAGCTG..........................................................................................................................................262.000.00-2.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGGTG....................................................................................................2112.001.00-----------1.00------------------------------------------1.00----------------------------------------------------------------------------------------------------
........................................................................................................................................GGGAAAGGAGGTTGAAGAAGGATC..........................................................................................2412.002.00---------2.00-------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................CCTGGGGGACAGAGCGAGACTAA........................................................................................................................................232.000.00------------------------------------------------------------------------------2.00----------------------------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGAAA.................................................................................................2312.005.00----2.00------------------------------------------------------------------------------------------------------------------------------------------------------
..................GCTGAGGCAGAGAATTG.......................................................................................................................................................................................................................1702.002.00-------------------------2.00---------------------------------------------------------------------------------------------------------------------------------
.....................................TGAACTTGGGAGGCAGAGGTTGCGAGC..........................................................................................................................................................................................272.000.00-2.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAAA................................................................................................2512.0016.00-------------------------------------2.00---------------------------------------------------------------------------------------------------------------------
..............................AATTGCTTGAACTTGGGAGGTC......................................................................................................................................................................................................221.000.00---------------------------------------------------------------------------------------------------------------------------------------1.00-------------------
..................................GCTTGAACTTGGGAGGCATC....................................................................................................................................................................................................201.000.00---------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
.........................................................................................AGCCTGGGGGACAGAGCGAGACTATCG......................................................................................................................................271.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................TGGGGGACAGAGCGAGAAGC.........................................................................................................................................201.000.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGT...................................................................................................2211.0017.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGAGGA...................................................................................................2211.001.00--------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTAT...................................................................................................211.000.00------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
.........................................................................................................................................................AAGGAGAAAAGTTCGAAC...............................................................................181.000.00----------------------------------1.00------------------------------------------------------------------------------------------------------------------------
................................................................................................................................AACGGATTGGGAAAGGAGGTT.....................................................................................................2111.001.00----------------------1.00------------------------------------------------------------------------------------------------------------------------------------
..........................AGAGAATTGCTTGAACTTGGGAGGCAGAGGTC................................................................................................................................................................................................321.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................TTGGGAGGCAGAGGTTGCGAGC..........................................................................................................................................................................................221.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..............................AATTGCTTGAACTTGGGAGGCAGAGGCTTG..............................................................................................................................................................................................301.000.00--------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAGT................................................................................................2511.002.00-------------------------------------------------------------------------------------------1.00---------------------------------------------------------------
........................................ACTTGGGAGGCAGAGGTTGCAGTGAGCAAG....................................................................................................................................................................................301.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................GGGGGACAGAGCGAGACTAGAT......................................................................................................................................221.000.00----------1.00------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAT..................................................................................................2311.0066.00------------------------------------------------------------------------------------------------------------------------------------------1.00----------------
........TACTCAAGAGGCTGAGGAG...............................................................................................................................................................................................................................191.000.00-------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
........TACTCAAGAGGCTGACG.................................................................................................................................................................................................................................171.000.00-------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
..................................GCTTGAACTTGGGAG.........................................................................................................................................................................................................1511.001.00---------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................CCAGCAGCAGCAACAGACAGC...2111.001.00------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GGAAAGGAGGTTGAAGAAGGA............................................................................................2111.001.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GGAAAGGAGGTTGAAGAAGGAAA..........................................................................................2311.001.00---------------------------------1.00-------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................AAAAAAAAAAACGGATTGTC...............................................................................................................201.000.00-----------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
.......................................................................................CCAGCCTGGGGGACAGAGCGAGAGAGA........................................................................................................................................271.000.00------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGC...................................................................................................2211.0017.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCCAGC.................................................2411.003.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
..........................AGAGAATTGCTTGAACTTGGGAGGCGGCG...................................................................................................................................................................................................291.000.00--------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCC....................................................2111.001.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTA....................................................................................................2111.005.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
....................................TTGAACTTGGGAGGCAGAGGT.................................................................................................................................................................................................2101.001.00------------------------------------------------------------1.00----------------------------------------------------------------------------------------------
........................................................TTGCAGTGAGCCAAGATCATGCCCGC........................................................................................................................................................................261.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAA...............................................................................................2011.001.00----------------1.00------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCCATA.................................................2411.004.00-------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGAT..................................................................................................2211.008.00-------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACTCA...................................................221.000.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGCAG.................................................................................................2411.0017.00---------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
..................................................................................GCACTCCAGCCTGGGGGGGG....................................................................................................................................................201.000.00-----------------------------------------------------------------------------------------------1.00-----------------------------------------------------------
.........................................................................................AGCCTGGGGGACAGAGCGAGACTACAC......................................................................................................................................271.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................AACTTGGGAGGCAGAGGGACA..............................................................................................................................................................................................211.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
................AGGCTGAGGCAGAGAATTGCAA....................................................................................................................................................................................................................221.000.00--------------------------------------------------------------------------------------------------1.00--------------------------------------------------------
.....................................................................................................................................ATTGGGAAAGGAGGTTGAA..................................................................................................1911.001.00------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAAG..............................................................................................2111.001.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AAGGAGGTTGAAGAAGGAGAAAAGT.....................................................................................2511.001.00----------------------------------------------------------------------1.00------------------------------------------------------------------------------------
................................................................................................................................................................................................................CCAGGGGCTTCAGCAGACCCAGCA..................2411.001.00----1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAAGGAT...........................................................................................2411.009.00-------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
....................................................................................ACTCCAGCCTGGGGGACAGAGCGAGACTCAT.......................................................................................................................................311.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GGAAAGGAGGTTGAAGAA...............................................................................................1811.001.00-----------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.........................................................................................AGCCTGGGGGACAGAGCGAGACTCCACCCC...................................................................................................................................301.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................TCCAGCCTGGGGGACAGAGCGAGACCGCG.......................................................................................................................................291.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.......CTACTCAAGAGGCTGAGGCGGGA............................................................................................................................................................................................................................231.000.00-------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
.............................................................................................................................................................................AGTCTTCCACTTCCTATTTCCA.......................................................2211.001.00---------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGGTGA...................................................................................................211.000.00--------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.......................................AACTTGGGAGGCAGAGGTTGCGAG...........................................................................................................................................................................................241.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................GGATTGGGAAAGGAGGTTGAAGT................................................................................................231.000.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................GGGAAAGGAGGTTGAAGAAGG.............................................................................................2111.001.00--------------------------------------------------------------------------------------------------------------------------------------1.00--------------------
.......................................AACTTGGGAGGCAGAGCTA................................................................................................................................................................................................191.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTAA....................................................................................................2111.004.00--------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................ATTGGGAAAGGAGGTTGAAGAA...............................................................................................2211.001.00-------------------------------------------------------------------------------------------------------------------1.00---------------------------------------
...................................................................................................ACAGAGCGAGACTCCATCTCAAAAAAAAAAACTAG....................................................................................................................351.000.00---------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
.............................................................................................TGGGGGACAGAGCGAGAAGA.........................................................................................................................................201.000.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCTAG..................................................231.000.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCCAA..................................................2311.004.00--------------------------------------------------------------------------------------------------------------------1.00--------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAG........................................................................................................1711.001.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
..............................AATTGCTTGAACTTGGGAGGCAGAGGTCGC..............................................................................................................................................................................................301.000.00--------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTGG....................................................................................................2111.004.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AGCCTGGGGGACAGAGCGAGACTCCCCCT....................................................................................................................................291.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGTGT.................................................................................................231.000.00--------------------------------------------------------------------------------------------------------1.00--------------------------------------------------
...................................CTTGAACTTGGGAGGCA......................................................................................................................................................................................................1701.001.00----------------------------------------1.00------------------------------------------------------------------------------------------------------------------
.........................................................................................AGCCTGGGGGACAGAGCGAGACCGTC.......................................................................................................................................261.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAAGGAA...........................................................................................2411.009.00-----------------------------------------------------------------------------------------------------------------------------------------------------1.00-----
......................................GAACTTGGGAGGCAGAGG..................................................................................................................................................................................................1801.001.00--------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAGAA...............................................................................................2611.001.00--------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTT....................................................................................................2111.005.00----------------------------------------------------------------------------------------1.00------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGG.......................................................................................................1811.001.00----------------1.00------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................ATTGGGAAAGGAGGTTGAAA.................................................................................................2011.001.00----------------------------------------------------------------------------------------------------------------------------------------------1.00------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGTAA.................................................................................................231.000.00-----------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGATA.................................................................................................2411.0066.00-------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................CCTGGGGGACAGAGCGAGACTCCACG.....................................................................................................................................261.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................TTGGGAAAGGAGGTTGAAGAAGGAT...........................................................................................2511.0011.00----------------------------------------------1.00------------------------------------------------------------------------------------------------------------
.............................................................................................................ACTCCATCTCAAAAAAAAAAACGGATTGG................................................................................................................2911.001.00--------------------------------------------------------------------------------------------------------------------------------1.00--------------------------
......................................................................................................................................................................................................................GCTTCAGCAGACCCAGCAGCAGCAACAGACA.....3111.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCCAC..................................................2311.004.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGGTGA...................................................................................................2211.001.00----------------------1.00------------------------------------------------------------------------------------------------------------------------------------
............................AGAATTGCTTGAACTTGGGAGATAA.....................................................................................................................................................................................................251.000.00------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................CTCCAGCCTGGGGGACAGAGCGAGAGAGA........................................................................................................................................291.000.00------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
................................................................AGCCAAGATCATGCCACTGCACTT..................................................................................................................................................................241.000.00-----------------------------------------------------------------------------------------------------------------1.00-----------------------------------------
........................................ACTTGGGAGGCAGAGGTTGCAGTGAGCAGAA...................................................................................................................................................................................311.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAT.................................................................................................2411.0016.00--------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGGC........................................................................................................171.000.00-----------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................GGAAAGGAGGTTGAAGAAGGAA...........................................................................................2211.001.00--------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
....................................................................................................................................GATTGGGAAAGGAGGTTG....................................................................................................1811.001.00----------------1.00------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................CAGCCTGGGGGACAGAGCGAGCTG..........................................................................................................................................241.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAAGA.............................................................................................2211.001.00----------------------------------------------------------------------------1.00------------------------------------------------------------------------------
.....................................................................................................................................................................................ACTTCCTATTTCCACCCTCAG................................................211.000.00------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
...................................CTTGAACTTGGGAGGCAG.....................................................................................................................................................................................................1811.001.00---------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................AAGGAGAAAAGTTCGGAAC..............................................................................191.000.00----------------------------------1.00------------------------------------------------------------------------------------------------------------------------
.................................................................................TGCACTCCAGCCTGGGGGACATAGG................................................................................................................................................251.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGGCC.......................................................................................................181.000.00-------------------------------------------------------------------------------------1.00---------------------------------------------------------------------
.................................TGCTTGAACTTGGGAGGCAGAGGTAGC..............................................................................................................................................................................................271.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCAAG..................................................231.000.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
..................GCTGAGGCAGAGAATTTCTA....................................................................................................................................................................................................................201.000.00----------------------------------------------------------------------------------------------------------1.00------------------------------------------------
........................................ACTTGGGAGGCAGAGGTTGCAGTGATTC......................................................................................................................................................................................281.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................AGGAGGTTGAAGAAGGAG...........................................................................................1840.250.25---------------------------------------------------------------------------------------0.25-------------------------------------------------------------------

Antisense strand
ATCTCAGCTACTCAAGAGGCTGAGGCAGAGAATTGCTTGAACTTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGGGACAGAGCGAGACTCCATCTCAAAAAAAAAAACGGATTGGGAAAGGAGGTTGAAGAAGGAGAAAAGTTCGACTTCAGTCTTCCACTTCCTATTTCCACCCAGTTCCAGCGCCAGGGGCTTCAGCAGACCCAGCAGCAGCAACAGACAGCAGC
...................................................................................................................................((..(((((((((((((.(((((..(((...........)))..))))).))))))).)))))).))....................................................
............................................................................................................................125........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189786GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR189784DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
TAX577740(Rovira)
total RNA. (breast)
TAX577745(Rovira)
total RNA. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR038862(GSM458545)
MM472. (cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR029128(GSM416757)
H520. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR189787GSM956925Paz8D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038855(GSM458538)
D10. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925Ago2(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038863(GSM458546)
MM603. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040015(GSM532900)
G623T. (cervix)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
GSM956925PazD5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR037936(GSM510474)
293cand1. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)
TAX577579(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR038853(GSM458536)
MELB. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR189783GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040018(GSM532903)
G701N. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
GSM956925Ago2D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR040022(GSM532907)
G575N. (cervix)
SRR029124(GSM416753)
HeLa. (hela)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......................AGGCAGAGAATTGCTTGAAAAA.............................................................................................................................................................................................................. 222.000.00-----------------------------------------------------2.00-----------------------------------------------------------------------------------------------------
..............................................................................CACTGCACTCCAGCCTGGGGGATCT................................................................................................................................................... 252.000.00-1.00-------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
...............................................AGGCAGAGGTTGCAGTGAGCCAAGATAGGC............................................................................................................................................................................. 302.000.00-2.00---------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................CTGCACTCCAGCCTGGGGGACAGGC................................................................................................................................................. 252.000.00-1.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CAGTGAGCCAAGATCATGCCGGT........................................................................................................................................................................ 231.000.00----------------------1.00------------------------------------------------------------------------------------------------------------------------------------
...............................................................................ACTGCACTCCAGCCTGGGGGACACACC................................................................................................................................................ 271.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................AGGCAGAGGTTGCAGTGAGCCAAGG.................................................................................................................................................................................. 251.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................GATCATGCCACTGCACTCCAGCCTGGGGCCTG.................................................................................................................................................... 321.000.00--------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
...............................................AGGCAGAGGTTGCAGTGAGCCAAGATAGGT............................................................................................................................................................................. 301.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................AGTGAGCCAAGATCATGCC........................................................................................................................................................................... 191.000.00-------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
..................................................................CCAAGATCATGCCACTGCACTCCAA............................................................................................................................................................... 251.000.00----------------------------------------1.00------------------------------------------------------------------------------------------------------------------
.........................................CTTGGGAGGCAGAGGTTGCAAG........................................................................................................................................................................................... 221.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................ACTGCACTCCAGCCTGGGGCACC.................................................................................................................................................... 231.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
......GCTACTCAAGAGGCTGAGAGGG.............................................................................................................................................................................................................................. 221.000.00------------------------------------------------------------1.00----------------------------------------------------------------------------------------------
.............................................................................................................................................................................AGTCTTCCACTTCCTTTGT.......................................................... 191.000.00---------------------------------------------------------------------------------------1.00-------------------------------------------------------------------
...............................................AGGCAGAGGTTGCAGTGAGCCAAAA.................................................................................................................................................................................. 251.000.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
..............................................................TGAGCCAAGATCATGCCACTGCACAAAA................................................................................................................................................................ 281.000.00--------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
................................................................AGCCAAGATCATGCCACTGGAAA................................................................................................................................................................... 231.000.00----------------------------------------------------------1.00------------------------------------------------------------------------------------------------
...................................................................................................................TCTCAAAAAAAAAAACGGCGG.................................................................................................................. 211.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
......................................GAACTTGGGAGGCAGAGGTTGCAGGGGC........................................................................................................................................................................................ 281.000.00------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
..............................................................................CACTGCACTCCAGCCTGGGGGATTC................................................................................................................................................... 251.000.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.......................................................GTTGCAGTGAGCCAAGATCATGCCGTCA....................................................................................................................................................................... 281.000.00---------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
..........................................................................................GCCTGGGGGACAGAGCGAGACTGGA....................................................................................................................................... 251.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................CAGCCTGGGGGACAGAGCGAGACTCCAC...................................................................................................................................... 281.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................CCAAGATCATGCCACTGCAAT................................................................................................................................................................... 211.000.00----------------------------------------------------------------------------------------------------------------1.00------------------------------------------
................AGGCTGAGGCAGAGAATGTCG..................................................................................................................................................................................................................... 211.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................CAGAGCGAGACTCCATCTCAAA................................................................................................................................ 221.000.00--------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
..................................................................CCAAGATCATGCCACTGCAAAAA................................................................................................................................................................. 231.000.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................................GGGGACAGAGCGAGACTTTGG...................................................................................................................................... 211.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................GCACTCCAGCCTGGGGGACTCTG................................................................................................................................................. 231.000.00----------------------------------------------------------------------------------------------------------------------1.00------------------------------------
................AGGCTGAGGCAGAGAATGGAG..................................................................................................................................................................................................................... 211.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................CTTGGGAGGCAGAGGTTGCAGTGAGCCACG................................................................................................................................................................................... 301.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................GCCACTGCACTCCAGCCTGGGGGTCGC................................................................................................................................................... 271.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................TATTTCCACCCAGTTCCA............................................. 181.000.00----------------------------------------------------1.00------------------------------------------------------------------------------------------------------
............................................................................GCCACTGCACTCCAGCCTGGGGT....................................................................................................................................................... 231.000.00-------------------------------------------------------------------------------------------------------------------------------------------------1.00---------
...............................................AGGCAGAGGTTGCAGTGAGCCAAGGT................................................................................................................................................................................. 261.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................ACTCCAGCCTGGGGGACACCAC................................................................................................................................................ 221.000.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
.........................................CTTGGGAGGCAGAGGTTGCAGTCTA........................................................................................................................................................................................ 251.000.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CAAAAAAAAAAACGGAGGGA................................................................................................................ 201.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................GCACTCCAGCCTGGGGGACAGAGCGAGGGCG......................................................................................................................................... 311.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TCAAAAAAAAAAACGGCG................................................................................................................... 181.000.00---------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
.....................................................................................CTCCAGCCTGGGGGACAGAGCGAGAG........................................................................................................................................... 261.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................CCACTGCACTCCAGCCTGGGGAAAC.................................................................................................................................................... 251.000.00------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
..................................................................................GCACTCCAGCCTGGGGGACAGAGCGAGGCA.......................................................................................................................................... 301.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................CATGCCACTGCACTCCAGCCTCGGC........................................................................................................................................................ 251.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................GCCAAGATCATGCCACTGCAG.................................................................................................................................................................... 211.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...................CTGAGGCAGAGAATTGCTACTG................................................................................................................................................................................................................. 221.000.00---------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
..............................................................................CACTGCACTCCAGCCTGGGGGATAC................................................................................................................................................... 251.000.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.........................CAGAGAATTGCTTGAAG................................................................................................................................................................................................................ 171.000.00-------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.........................................................................CATGCCACTGCACTCCAGCCTCCCC........................................................................................................................................................ 251.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................GAGGCAGAGGTTGCAGTGAGCCAGACG................................................................................................................................................................................. 271.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................GCGAGACTCCATCTCAAAAAAAAAAACG...................................................................................................................... 2830.330.33-0.33---------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................AGCAGACCCAGCAGCAGCA............ 1940.250.25--------------------------------------------------------------------------------------0.25--------------------------------------------------------------------
.....................................................................................................................................................................................................................................GCAGCAGCAACAGACAG.... 1740.250.25----------------------------------------------------------------------------------------------------------------------------------------------------------0.25