ID: uc003pvv.2
GENE: LAMA4(11)
chr6:112493957-112494206-


(5)
BREAST 		(6)
CELL-LINE 		(8)
CERVIX 		(2)
FIBROBLAST 		(9)
HEART 		(1)
HELA 		(1)
LIVER 		(2)
OTHER 		(30)
SKIN 		(1)
TESTES 		(2)
UTERUS

Sense strand
ATCCAGGGACTCCCAAACTCTAAAAAGTAGCATTTTTTACTTCAAATCTAAAAGGTGGAGCTAATTTTGTGAACAATAGCTTCAATCTCCATTGCTAAAGAAGGCATGGCCTGAGAATTTTGCAACTTTGCAAAATGCTGGGAGGAATGGAAGCGAACAGGAGAAAGCCACACTGAGCCTTTATCTCCATTTCTTCCCAGTACTGAGCCAGGCTGAGAGCTGGCAGCGGCTGCACAATGAGACCCGCACT
.........................................................................................................................................((((((((((((((....((.(((....((.....))...)))))...)))))).))))))))..................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189782SRR343335SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040018(GSM532903)
G701N. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR040016(GSM532901)
G645N. (cervix)		GSM532876(GSM532876)
G547T. (cervix)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR343334SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR038862(GSM458545)
MM472. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189783SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577744(Rovira)
total RNA. (breast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040010(GSM532895)
G529N. (cervix)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR040012(GSM532897)
G648N. (cervix)		SRR029124(GSM416753)
HeLa. (hela)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040022(GSM532907)
G575N. (cervix)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040008(GSM532893)
G727N. (cervix)
...................................................................................................................................................................................TTTATCTCCATTTCTTCCCAGT.................................................22114.0014.001.00--2.00-1.001.00---------------1.00---1.00-------------1.00-------------1.00--1.00-1.001.00---1.00-1.00-----
...................................................................................................................................................................................TTTATCTCCATTTCTTCCCATT.................................................229.000.00-1.00----2.00-------1.00---1.00--1.00----------------------1.00-1.00--------------------1.00----
.........................................................................................................................................CTGGGAGGAATGGAAGCGAACAG..........................................................................................2317.007.00-----1.00-----1.00----1.00-1.001.00---------------1.00-------------------------1.00----------
....................................................................................................................................................................................TTATCTCCATTTCTTCCCATTT................................................225.000.00---1.00-----1.00---1.00---1.00-------1.00----------------------------------------------
...................................................................................................................................................................................TTTATCTCCATTTCTTCCCAAT.................................................224.000.00-2.00--------------------1.00------------------------------------------1.00------
.........................................................................................................................................CTGGGAGGAATGGAAGCGAACAGG.........................................................................................2414.004.00-----1.00-----1.00----------------1.00------------------------1.00------------------
....................................................................................................................................................................................TTATCTCCATTTCTTCCCAGT.................................................2113.003.00----------2.00---------------------------------------------------1.00---------
.........................................................................................................................................CTGGGAGGAATGGAAGCGAACAGA.........................................................................................2413.007.00-------1.00------------2.00---------------------------------------------------
...................................................................................................................................................................................TTTATCTCCATTTCTTCCCAGTT................................................2312.0014.002.00-----------------------------------------------------------------------
.........................................................................................................................................CTGGGAGGAATGGAAGCGA..............................................................................................1912.002.00-----------------1.00-------------------------------1.00----------------------
...................................................................................................................................................................................TTTATCTCCATTTCTTCCCAGA.................................................222.000.00-----------------------------------------------1.00--------1.00---------------
.........................................................................................................................................CTGGGAGGAATGGAAGCGAAC............................................................................................2112.002.00--------1.00-------------------------1.00-------------------------------------
....................................................................................................................................................................................TTATCTCCATTTCTTCCCAGTT................................................2212.003.00-------------1.00-------------1.00--------------------------------------------
.........................................................................................................................................CTGGGAGGAATGGAAGCGAACAGGT........................................................................................2512.004.00-----------------------1.001.00-----------------------------------------------
...................................................................................................................................................................................TTTATCTCCATTTCTTCCCATTT................................................231.000.00----1.00-------------------------------------------------------------------
...................................................................................................................................................................................TTTATCTCCATTTCTTCCCAAA.................................................221.000.00-------------------------------------------------------1.00----------------
...................................................................................................................................................................................TTTATCTCCATTTCTTCCCATAT................................................231.000.001.00-----------------------------------------------------------------------
.........................................................................................................................................CTGGGAGGAATGGAAGCGAGAAA..........................................................................................2311.002.00--------------1.00---------------------------------------------------------
...................................................................................................................................................................................TTTATCTCCATTTCTTCCC....................................................1911.001.00--------------------------------------------------------------------1.00---
.................................................................................................................................................................................................................AGGCTGAGAGCTGGCAGC.......................1811.001.00------------------------------------------------1.00-----------------------
.........................................................................................................................................CTGGGAGGAATGGAAGCGAACAGTT........................................................................................2511.007.00--------1.00---------------------------------------------------------------
...........................TAGCATTTTTTACTTCACTTG..........................................................................................................................................................................................................211.000.00---------------------1.00--------------------------------------------------
....................................................................................................................................................................................TTATCTCCATTTCTTCCCAGACT...............................................231.000.00-------1.00----------------------------------------------------------------
....................................................................................................................................................................................TTATCTCCATTTCTTCCCAGTTT...............................................2311.003.001.00-----------------------------------------------------------------------
.........................................................................................................................................CTGGGAGGAATGGAAGCGAACAGGA........................................................................................2511.001.00----------------------------------------------------------1.00-------------
.........................................................................................................................................CTGGGAGGAATGGAAGCGAACAGGTTT......................................................................................2711.004.00------------------------------------1.00-----------------------------------
...............................................................................................................................................................................................................CCAGGCTGAGAGCTGGCAGCGGC....................2311.001.00----------------------------------------------------1.00-------------------
........................................................................................................................................GCTGGGAGGAATGGAAGCGAACAGG.........................................................................................2511.001.00----1.00-------------------------------------------------------------------
....................................................................................................................................................................................TTATCTCCATTTCTTCCCAAAT................................................221.000.00-1.00----------------------------------------------------------------------
.........................................................................................................................................................................................................ACTGAGCCAGGCTGAGAGCT.............................2011.001.00-----------------------1.00------------------------------------------------
.........................................................................................................................................CTGGGAGGAATGGAAGCGAAA............................................................................................2111.001.00---------------1.00--------------------------------------------------------
................................................................................................................................................................................................................CAGGCTGAGAGCTGGCAGC.......................1911.001.00-----------------------------1.00------------------------------------------
.........................................................................................................................................CTGGGAGGAATGGAAGCGAAGAA..........................................................................................2311.001.00-------------------------------1.00----------------------------------------
.........................................................................................................................................CTGGGAGGAATGGAAGCGAA.............................................................................................2011.001.00---------------1.00--------------------------------------------------------
....................................................................................................................................................................................TTATCTCCATTTCTTCCCAGAA................................................221.000.00------------------------------1.00-----------------------------------------
..................................................................................................................................................................................CTTTATCTCCATTTCTTCCCATTT................................................241.000.00--------------------------------------------------1.00---------------------
.........................................................................................................................................CTGGGAGGAATGGAAGCGAACA...........................................................................................2211.001.00---------------------------------------------------------------------1.00--
...................................................................................................................................................................................TTTATCTCCATTTCTTCCCATA.................................................221.000.00------------------------1.00-----------------------------------------------
.........................................................................................................................................CTGGGAGGAATGGAAGCGAACAGT.........................................................................................2411.007.00---------------------------------------------1.00--------------------------
.................................................................................................................................................................................................................AGGCTGAGAGCTGGCAGCGGCTGC.................2411.001.00---------------------------------------------------------------1.00--------
........................................................................................................................................................................................................TACTGAGCCAGGCTGAGAGCTGGCAGC.......................2711.001.00-------------------1.00----------------------------------------------------
........................................................................................................................................GCTGGGAGGAATGGAAGCGAACAG..........................................................................................2411.001.00---------------------------------1.00--------------------------------------
................................................................................................................................................................................................................CAGGCTGAGAGCTGGCAGCGGCT...................2311.001.00-----------------------------------------1.00------------------------------
...................................................................................................................................................................................TTTATCTCCATTTCTTCCCAGTTT...............................................2411.0014.00----1.00-------------------------------------------------------------------
..................................................................................................................................CAAAATGCTGGGAGGAATGG....................................................................................................2011.001.00-------1.00----------------------------------------------------------------
........................................................................................................................................GCTGGGAGGAATGGAAGCGAAC............................................................................................2211.001.00---1.00--------------------------------------------------------------------
....................................................................................................................................................................................TTATCTCCATTTCTTCCCAGTCC...............................................2311.003.001.00-----------------------------------------------------------------------
................................................................................................................................................................................................................CAGGCTGAGAGCTGGCAGCGGCTGCA................2611.001.00---------1.00--------------------------------------------------------------
........................................................................................................................................................................................................TACTGAGCCAGGCTGAGAGCT.............................2111.001.00-------------------------------------------1.00----------------------------
.................................................................................................................................................................................................................AGGCTGAGAGCTGGCAG........................1720.500.50----------------------------------------------------------------------0.50-
.........................................................................................................................................CTGGGAGGAATGGAAGCG...............................................................................................1820.500.50-----------------------------------------------------------------------0.50

Antisense strand
ATCCAGGGACTCCCAAACTCTAAAAAGTAGCATTTTTTACTTCAAATCTAAAAGGTGGAGCTAATTTTGTGAACAATAGCTTCAATCTCCATTGCTAAAGAAGGCATGGCCTGAGAATTTTGCAACTTTGCAAAATGCTGGGAGGAATGGAAGCGAACAGGAGAAAGCCACACTGAGCCTTTATCTCCATTTCTTCCCAGTACTGAGCCAGGCTGAGAGCTGGCAGCGGCTGCACAATGAGACCCGCACT
.........................................................................................................................................((((((((((((((....((.(((....((.....))...)))))...)))))).))))))))..................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189782SRR343335SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040018(GSM532903)
G701N. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR040016(GSM532901)
G645N. (cervix)		GSM532876(GSM532876)
G547T. (cervix)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR343334SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR038862(GSM458545)
MM472. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189783SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577744(Rovira)
total RNA. (breast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040010(GSM532895)
G529N. (cervix)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR040012(GSM532897)
G648N. (cervix)		SRR029124(GSM416753)
HeLa. (hela)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040022(GSM532907)
G575N. (cervix)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040008(GSM532893)
G727N. (cervix)
...................................................................................................................................AAAATGCTGGGAGGAAATG.................................................................................................... 195.000.00--4.00---------------------------------------1.00-----------------------------
.................................................................................................................................................................................................................AGGCTGAGAGCTGGCACTC...................... 191.000.00-------------------------------------1.00----------------------------------
..............................................................................................................................................................................................TTCTTCCCAGTACTGGAT.......................................... 181.000.00------------1.00-----------------------------------------------------------
...........................................................................................................................................GGGAGGAATGGAAGCCCCT............................................................................................ 191.000.00--------------------------------1.00---------------------------------------
.....................................................................................................................................................................................................................TGAGAGCTGGCAGCGG..................... 1611.001.00---------------------------------------1.00--------------------------------
......................AAAAGTAGCATTTTTTAG.................................................................................................................................................................................................................. 181.000.00-1.00----------------------------------------------------------------------
..........................GTAGCATTTTTTACTTCAGATT.......................................................................................................................................................................................................... 221.000.00----------------1.00-------------------------------------------------------
......................................................................................................................................................AAGCGAACAGGAGAATTT.................................................................................. 181.000.00------------1.00-----------------------------------------------------------
........................................................................ACAATAGCTTCAATCTCATA.............................................................................................................................................................. 201.000.00---------------------------------------------------1.00--------------------
..............................................................................................................................................................................GAGCCTTTATCTCCACTGA......................................................... 191.000.00--------------------------------------1.00---------------------------------