ID: uc003mtz.4
GENE: WRNIP1(4)
chr6:2784358-2784607+


(3)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(3)
B-CELL 		(4)
BRAIN 		(6)
BREAST 		(25)
CELL-LINE 		(4)
HEART 		(2)
HELA 		(1)
LIVER 		(2)
OTHER 		(13)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CACCACACAGTAACCACTCTCAATATTTCTTGCATAAGTTCATGGGATCAGAGACTAGAGCTAAGTCAGGCTGTTTTGCTACATGGGATTGTTTTGGTCACCAAGTGTACAAGCAGTGGTGGTCTGTGGTCGCCTGCACATAGGCCAGGAGGACAGTGTGTGTCATGACTGAAACTCTCCTTTGTCTCTGTGTGTGGCAGGTCTGGCAGACCCGTCTGCGTTAACACAAGCGGTTGCTGCCTACCAAGGC
...................................................................................................................................(((.(((((((((...((((((.(((....((....))....))).))))))...))))))))))))....................................................
............................................................................................................................125........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189784DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189787SRR390723(GSM850202)
total small RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR191472(GSM715582)
120genomic small RNA (size selected RNA from . (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR189786SRR553576(SRX182782)
source: Testis. (testes)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
...............................................................................................................................................................................TCTCCTTTGTCTCTGTGTGTGGC....................................................231114.00114.0038.0014.009.0011.003.003.006.004.005.003.003.00---3.00-2.001.00-2.001.00-1.00-1.00---1.00-------------1.00-----------1.001.00----------
...............................................................................................................................................................................TCTCCTTTGTCTCTGTGTGTGG.....................................................22113.0013.0011.001.00---------------1.00------------------------------------------------
.................................................................................................................................................................................TCCTTTGTCTCTGTGTGTGGCA...................................................2219.009.00-1.00---2.00--------------------------------1.001.00-1.00-----1.001.00---1.00-------------
.................................................................................................................................................................................TCCTTTGTCTCTGTGTGTGGCAGT.................................................2416.002.00-1.00-1.00---------1.00------1.00------------------------1.00------------------1.00-
.................................................................................................................................TCGCCTGCACATAGGCCAGGAGGA.................................................................................................2415.005.00--4.00------------------1.00--------------------------------------------
......................................................................................................................................TGCACATAGGCCAGGAGGACAGT.............................................................................................2314.004.00--4.00---------------------------------------------------------------
...............................................................................................................................................................................TCTCCTTTGTCTCTGTGTGTGGCA...................................................2413.003.00-----1.00------1.00------------------------1.00----------------------------
.................................................................................................................................................................................TCCTTTGTCTCTGTGTGTGGCAT..................................................2312.009.00--------------------------1.00----------------------------------1.00----
...............................................................................................................................................................................TCTCCTTTGTCTCTGTGTGTGGT....................................................2312.0013.001.00--------------------------------------------------------1.00--------
...............................................................................................................................................................................TCTCCTTTGTCTCTGTGTGGGGC....................................................232.000.002.00-----------------------------------------------------------------
.................................................................................................................................TCGCCTGCACATAGGCCAGGAG...................................................................................................2212.002.00----2.00-------------------------------------------------------------
.................................................................................................................................................................................TCCTTTGTCTCTGTGTGTGGCAG..................................................2312.002.00-----1.00-----------------1.00------------------------------------------
................................................................................................................................................................................................................................CACAAGCGGTTGCTGCCTA.......1912.002.00----2.00-------------------------------------------------------------
.................................................................................................................................................................................TCCTTTGTCTCTGTGTGTGGC....................................................2112.002.001.00--------------------------------1.00--------------------------------
....................................................................................................................................................................................TTTGTCTCTGTGTGTGGCAGT.................................................212.000.00---------------2.00--------------------------------------------------
......................................................................................................................................TGCACATAGGCCAGGAGGACAGTTAGA.........................................................................................2712.004.00-2.00----------------------------------------------------------------
...............................................................................................................................................................................TCTCCTTTGTCTCTGTGTGGCAG....................................................232.000.00--2.00---------------------------------------------------------------
..................................................................................ATGGGATTGTTTTGGTCACCA...................................................................................................................................................2112.002.00--------------------------------------------------1.00-----1.00---------
.................................................................................................................................................................................TCCTTTGTCTCTGTGTGTGGCATT.................................................2412.009.00--2.00---------------------------------------------------------------
..................................................GAGACTAGAGCTAAGTCAGGCTGTT...............................................................................................................................................................................2511.001.00----------------------------------1.00-------------------------------
................................................................................................................................................................................CTCCTTTGTCTCTGTGTGTGGCA...................................................2311.001.00-------1.00----------------------------------------------------------
..................................................................................................................................................................................CCTTTGTCTCTGTGTGTGGCAT..................................................221.000.00-------------------------------------------1.00----------------------
....................................................................................................................................................................................................................................AGCGGTTGCTGCCTACCAA...1911.001.00----------------------------------------1.00-------------------------
....................................AGTTCATGGGATCAGAGACTAGA...............................................................................................................................................................................................2311.001.00-----------------------------------------------------------1.00------
....................................................................................................................................................................................TTTGTCTCTGTGTGTGGCA...................................................1911.001.00----------1.00-------------------------------------------------------
...............................................................................................................................................................................TCTCCTTTGTCTCTGTGTGTGGCTT..................................................2511.00114.00------------------------------------1.00-----------------------------
...................................................................................................................................................................................CTTTGTCTCTGTGTGTGGCAGT.................................................221.000.00---------------------------------------------------1.00--------------
.................................................................................................................................................................................TCCTTTGTCTCTGTGTGTGGCAGTC................................................2511.002.00-----------------------------------------------------1.00------------
...................................................................................................................GTGGTGGTCTGTGGTCGC.....................................................................................................................1811.001.00-------------1.00----------------------------------------------------
..................................................................................................................................................................................CCTTTGTCTCTGTGTGTGGCAGT.................................................231.000.00------------1.00-----------------------------------------------------
...................................................................................................................................................................................CTTTGTCTCTGTGTGTGGCAGA.................................................221.000.00------------1.00-----------------------------------------------------
................................................................................................................................................................................CTCCTTTGTCTCTGTGTGTGGC....................................................2211.001.00------------------1.00-----------------------------------------------
.................................................................................................................................................................................TCCTTTGTCTCTGTGTGTGGCAGTT................................................2511.002.00-------------1.00----------------------------------------------------
.....................................................................................................CAAGTGTACAAGCAGAATC..................................................................................................................................191.000.00--------------------------------------------------------------1.00---
...........................................................................................................................................................GTGTGTGTCATGACTGAAAC...........................................................................2011.001.00------------------------------1.00-----------------------------------
.................................................................................................................................................................................TCCTTTGTCTCTGTGTGTTGC....................................................211.000.001.00-----------------------------------------------------------------
..................................................................................................................................................AGGAGGACAGTGTGTGTGTGC...................................................................................211.000.00--------------------------------------------1.00---------------------
..................................................................................................................................CGCCTGCACATAGGCCAGGAGGA.................................................................................................2311.001.00---------------------------------------------------------------1.00--
.......................................................................................................AGTGTACAAGCAGTGGT..................................................................................................................................1711.001.00-----------------------------1.00------------------------------------
.................................................................................................................................................................................................GTGGCAGGTCTGGCAGACC......................................1911.001.00------------------1.00-----------------------------------------------
.........................................................................................................................................................................................................TCTGGCAGACCCGTCTG................................1711.001.00-------------------------------1.00----------------------------------
............................................................................TGCTACATGGGATTGTTTTGGTCACCAA..................................................................................................................................................2811.001.00-------------------------------------------------1.00----------------
.................................................................................................................................TCGCCTGCACATAGGCCAGGAGG..................................................................................................2311.001.00------------------------------------------------------------1.00-----
...............................................................................................................................................................................TCTCCTTTGTCTCTGTGTGTGGCAT..................................................2511.003.00---------1.00--------------------------------------------------------
.........................................................GAGCTAAGTCAGGCTGTTTTGCTA.........................................................................................................................................................................2411.001.00-----------------------------------------------------------------1.00
...............................................................................................................................................................................TCTCCTTTGTCTCTGTGTGTG......................................................2111.001.00-1.00----------------------------------------------------------------
..................................................GAGACTAGAGCTAAGTCAGG....................................................................................................................................................................................2011.001.00---------------------------1.00--------------------------------------
..................................................................................................................................................AGGAGGACAGTGTGTGTCATG...................................................................................2111.001.00----------------------------------------------------------1.00-------
.................................................................................................................................................................................TCCTTTGTCTCTGTGTGTGGCAGG.................................................2411.001.00-1.00----------------------------------------------------------------
..................................................................................................................................CGCCTGCACATAGGCCAGGAGGATACT.............................................................................................2711.001.00-----------------------------------1.00------------------------------
...................................AAGTTCATGGGATCAGAGACTAG................................................................................................................................................................................................2311.001.00-------------------------1.00----------------------------------------
.............................................................................................................................................................................ACTCTCCTTTGTCTCTGTGTGTGGC....................................................2511.001.00--------------------------------1.00---------------------------------
................................................................................................................................................................................CTCCTTTGTCTCTGTGTGTGG.....................................................2111.001.00----------------------------------------------1.00-------------------

Antisense strand
CACCACACAGTAACCACTCTCAATATTTCTTGCATAAGTTCATGGGATCAGAGACTAGAGCTAAGTCAGGCTGTTTTGCTACATGGGATTGTTTTGGTCACCAAGTGTACAAGCAGTGGTGGTCTGTGGTCGCCTGCACATAGGCCAGGAGGACAGTGTGTGTCATGACTGAAACTCTCCTTTGTCTCTGTGTGTGGCAGGTCTGGCAGACCCGTCTGCGTTAACACAAGCGGTTGCTGCCTACCAAGGC
...................................................................................................................................(((.(((((((((...((((((.(((....((....))....))).))))))...))))))))))))....................................................
............................................................................................................................125........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189784DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189787SRR390723(GSM850202)
total small RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR191472(GSM715582)
120genomic small RNA (size selected RNA from . (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR189786SRR553576(SRX182782)
source: Testis. (testes)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
.........................................................................TTTTGCTACATGGGATTGTT............................................................................................................................................................. 201.000.00-----------1.00------------------------------------------------------
.........................................................................TTTTGCTACATGGGATTGTTAG........................................................................................................................................................... 221.000.00-----------1.00------------------------------------------------------
...........................................................................TTGCTACATGGGATTGTTT............................................................................................................................................................ 1911.001.00-----------1.00------------------------------------------------------