ID: uc003gel.2
GENE: NELFA(6)
chr4:1988080-1988329-


(2)
AGO1.ip 		(3)
AGO2.ip 		(1)
AGO3.ip 		(24)
B-CELL 		(9)
BRAIN 		(16)
BREAST 		(38)
CELL-LINE 		(2)
CERVIX 		(2)
FIBROBLAST 		(2)
HEART 		(8)
HELA 		(1)
KIDNEY 		(9)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(46)
SKIN 		(2)
UTERUS

Sense strand
GCAAAGTGTGAGGTCGTGGCTCCAGGCGTTCCCCTGCTCCTTGAGGTCCGGGATCCTGGGGGTCCTGCCCGCTGCCCGCCAGGGGTTTGGCCCTTCCCCTCTGCGGCGCTAGCCTAGAAGAGGGTGGGACGTTCTGAGCTCGGGGTGGGGGACGTTTGCCGGTCACTGCTGCTGGCGCCCTGACTGTTGCCGTCCTCCAGCCCCACTCAAAGGCATCCCGAAGCAGGCGCCCTTCAGAAGCCCCACGGCG
.................................................................................................................................................(((((((((...((((((((..((.......))..))))))..)))))))))))...................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR189783SRR189786SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR189787SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		TAX577453(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040027(GSM532912)
G220T. (cervix)		SRR037938(GSM510476)
293Red. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR029128(GSM416757)
H520. (cell line)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		SRR029124(GSM416753)
HeLa. (hela)		TAX577743(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR037931(GSM510469)
293GFP. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Ago2D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577588(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAG..................................................211106.00106.007.009.0014.008.008.002.00---3.00--4.006.005.00--4.005.00--3.001.002.003.00-2.00-----2.00----1.00-2.00---2.00----1.00---1.00--2.00-1.00---------------1.00-------------------1.00-----1.00------1.00------------------------------------------1.001.00---------------1.001.00
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGA.................................................23194.0039.0038.00------2.003.00--2.00----2.00--1.001.00-2.00--1.00-1.002.00--1.00--2.00---1.00---1.00---1.001.00-1.00-1.001.00-----1.001.002.002.00--1.001.002.00---2.002.00--2.001.00-1.00--------1.00--------------1.00---1.00---1.001.00----------1.00--------------1.00----------1.00------------1.001.00-1.00----
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGT.................................................23181.0039.0041.003.00----4.001.002.00-2.002.00---1.00---1.00-1.00-----1.001.00---------1.00-----1.00-1.001.00--2.00-----1.00-----------1.00---1.00----------------1.00--1.00-1.00----------------1.001.00--1.00--------1.001.00-1.00-------1.00-1.00--------------------1.00---------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGT.................................................22169.00106.0043.001.00----1.002.001.00--1.00---------------1.00-1.001.001.00-2.00-2.00-----1.00---2.00--1.00----------1.00------------1.00------------1.00-1.00----------1.00----1.00----------------------------------1.00--------------------------1.00--
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGA.................................................22141.00106.004.00--------1.001.00-----3.00--3.003.00-------1.003.00----1.00-----3.00-1.00--------1.00-1.00----1.00------1.00--1.00----1.00--1.00-1.00----1.00----------------1.00-------------1.00-----1.00------------------1.00----1.00-----------1.00--1.00----1.00---
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAG..................................................22139.0039.007.0015.00---7.00-1.00--1.00----------------------------------1.00-----------------1.00-----------------1.00-----------------------------------------------1.00-----------1.00------1.00--1.001.00---------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGAA................................................23116.00106.00---2.001.00----2.00--2.00----------2.00--2.00----------1.00-1.00--------------1.00--1.00------------------------------1.00-------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCA...................................................21110.0010.002.00---------2.001.00-------------1.00---------------1.00--------------------------------------------------------------1.00-------------------------1.00------------------------1.00------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCAC....................................................................................2218.008.006.00--------------2.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGTT................................................2416.0039.005.00-------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCA...................................................2015.005.00-1.00----------------------1.00----------1.00---------------------------1.00----------------1.00---------------------------------------------------------------------------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCACT...................................................................................2314.004.003.00------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCC....................................................2014.004.00-1.00-------------1.00-----------------------------------------------------1.00-------------------------1.00------------------------------------------------------------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCACTGT.................................................................................2513.003.00-2.00-----------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCACTG..................................................................................2413.003.00-2.00---------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGAT................................................2313.00106.00-------------------------------------------------1.00--------------------------------1.00-----------------------------------------------------------------------1.00-------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGCATC..............................................2613.002.00------------------------------------3.00-----------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCACTGA.................................................................................2513.003.00-2.00---------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCA.....................................................................................2113.003.002.00------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGTA................................................2312.00106.00--------------------------------------------------------------1.00----------------------------------1.00----------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGC.................................................2312.002.00------1.00--------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGAT................................................2412.0039.00------------------------------------------------------1.00-------------------------------------------------------------------------1.00---------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGG.................................................2312.0039.00--------------------------------------------2.00---------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGATT...............................................2412.00106.00---------------------------------------------------------------------------------------------------------------------1.00-------------1.00------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGAA................................................2412.0039.00-------------------------------------------------------------------------------------------1.00------------------------------1.00---------------------------------------------
.............................................................................................................................................................................................CCGTCCTCCAGCCCCACGATC........................................211.000.00-------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGTTT...............................................2411.00106.00--------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCA......................................................1811.001.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAAA.................................................2211.005.00---------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GCATCCCGAAGCAGGCGCCCGTCA..............241.000.00--------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAATTT...............................................2511.0010.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGAGT...............................................2411.00106.00--------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAT..................................................2211.0010.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCACTGC.................................................................................2511.001.00------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGTAT...............................................2411.00106.00-------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGCA................................................2411.002.00----------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCC....................................................1911.001.00----------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
.....................................................................................................TGCGGCGCTAGCCTAACAT..................................................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCATTAT...............................................2511.0010.00-----------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCCG..................................................2111.001.00--------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTC.....................................................1911.001.00---------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGG.................................................2211.00106.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................CCAGGGGTTTGGCCCCA...........................................................................................................................................................171.000.00----------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------
...............................................................................................................................................GGTGGGGGACGTTTGCGC.........................................................................................181.000.00-------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGTATT..............................................2611.0039.00------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTC........................................................1611.001.00---------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGCT................................................2411.002.00------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCT....................................................2011.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAA..................................................2211.0010.00------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
...............................................................................................................................................................................................GTCCTCCAGCCCCACGACG........................................191.000.00--------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------
...........................................................................................................................................................................................................................GAAGCAGGCGCCCTTATGT............191.000.00------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------
...............................................................................CAGGGGTTTGGCCCTATG.........................................................................................................................................................181.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCC.......................................................1711.001.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCCGT.................................................2311.004.00-------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------
.................................................................................................................................................................................CCCTGACTGTTGCCGTCCTCCAGT.................................................241.000.00-----------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTTTAG..................................................211.000.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGTAA...............................................2411.00106.00-----------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGC.................................................2211.001.00----------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCCCAG...................................................201.000.00-----------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCAA....................................................................................2211.003.00------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------
....................................................................................................................................................................................TGACTGTTGCCGTCCTCCAGT.................................................211.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GAAGCAGGCGCCCTTATCT............191.000.00-------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGTTT...............................................2511.0039.00------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................CCCTTCAGAAGCCCCCAGC..191.000.00------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------
.................................................................................................................................................TGGGGGACGTTTGCCGGTCACTGC.................................................................................2411.001.00------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGT.........................................................1430.330.33-----------------------------------------------0.33------------------------------------------------------------------------------------------------------------------------

Antisense strand
GCAAAGTGTGAGGTCGTGGCTCCAGGCGTTCCCCTGCTCCTTGAGGTCCGGGATCCTGGGGGTCCTGCCCGCTGCCCGCCAGGGGTTTGGCCCTTCCCCTCTGCGGCGCTAGCCTAGAAGAGGGTGGGACGTTCTGAGCTCGGGGTGGGGGACGTTTGCCGGTCACTGCTGCTGGCGCCCTGACTGTTGCCGTCCTCCAGCCCCACTCAAAGGCATCCCGAAGCAGGCGCCCTTCAGAAGCCCCACGGCG
.................................................................................................................................................(((((((((...((((((((..((.......))..))))))..)))))))))))...................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR189783SRR189786SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR189787SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		TAX577453(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040027(GSM532912)
G220T. (cervix)		SRR037938(GSM510476)
293Red. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR029128(GSM416757)
H520. (cell line)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		SRR029124(GSM416753)
HeLa. (hela)		TAX577743(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR037931(GSM510469)
293GFP. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Ago2D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577588(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
....................................................................CCGCTGCCCGCCAGGTG..................................................................................................................................................................... 175.000.00-------1.00-------1.00--------------1.00------------------------------------------------------------------------------------------------------1.001.00---------------------------------
......................................................................GCTGCCCGCCAGGGGTGTG................................................................................................................................................................. 192.000.00-------------------------------------1.00---------------------------------------------------------------------1.00------------------------------------------------------------
............................................................................................................................................................................................GCCGTCCTCCAGCCCTATG........................................... 191.000.00--------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
......................................................................GCTGCCCGCCAGGGGTGGG................................................................................................................................................................. 191.000.00------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----
......................................................................................TTGGCCCTTCCCCTCTGCG................................................................................................................................................. 191.000.00---------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------
................................................................................................................................................................................GCCCTGACTGTTGCCG.......................................................... 1611.001.00---------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................ACTGTTGCCGTCCTCCAGCCCC.............................................. 2211.001.00------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------
..............................................................................................................................................................................................CGTCCTCCAGCCCCAATG.......................................... 181.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CCTTCAGAAGCCCCACCC.. 181.000.00------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------
...........................................................................................................................................................................................TGCCGTCCTCCAGCCCCAC............................................ 1911.001.00-------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................GAGCTCGGGGTGGGG.................................................................................................... 1580.120.12----------0.12-------------------------------------------------------------------------------------------------------------------------------------------------------------