| (1) AGO1.ip | (1) AGO1.ip OTHER.mut | (1) AGO2.ip | (1) AGO3.ip | (5) B-CELL | (2) BREAST | (24) CELL-LINE | (2) CERVIX | (2) HEART | (1) HELA | (1) LIVER | (2) OTHER | (1) RRP40.ip | (7) SKIN | (1) XRN.ip |
| GAAGGATTGGGCAAGCTGAGGCAGTTGGAAGCTACTCTGAGGTGTGGCATGAATGAGGGCGTGGCTGTGGTGGGCAGTGGTGACCTGAGCTACCCCCAAGTATCCGCCCCCAGCCCTGCTCTGGCAGCCCCTGCAGCTGCTCTGGGTAAGGGAGCAGGGCCAGCATTCTATCTCACTGCTGTTCTCTGCTCTCCCCGCAGGTGGAAGGCTTTAGGGCCACCATGGCGCAGCGCCTGGTGCGCGTGCTGCA ........................................................................................................................................((((...(((...((((((((((.(((((...........)))))..))))))))))))))))).................................................. .......................................................................................................................................136.............................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR207113(GSM721075) IP against AGO 1 & 2. (ago1/2 cell line) | SRR207114(GSM721076) IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line) | DRR000557(DRX000315) THP-1 whole cell RNA, after 3 day treatment w. (cell line) | SRR015358(GSM380323) Naïve B Cell (Naive39). (B cell) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR314796(SRX084354) Total RNA, fractionated (15-30nt). (cell line) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | DRR000556(DRX000314) THP-1 whole cell RNA, after 3 day treatment w. (cell line) | SRR189782 | DRR000555(DRX000313) THP-1 whole cell RNA, no treatment. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | DRR000558(DRX000316) THP-1 whole cell RNA, after 3 day treatment w. (cell line) | TAX577742(Rovira) total RNA. (breast) | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR326282(GSM769512) Dicer mRNA was knocked down using siDicer, to. (cell line) | SRR330923(SRX091761) tissue: normal skindisease state: normal. (skin) | SRR029125(GSM416754) U2OS. (cell line) | SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin) | TAX577740(Rovira) total RNA. (breast) | DRR000562(DRX000320) Isolation of RNA following immunoprecipitatio. (ago3 cell line) | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR060982(GSM569186) Human centrocyte [09-001]. (cell line) | SRR040015(GSM532900) G623T. (cervix) | SRR040028(GSM532913) G026N. (cervix) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR038854(GSM458537) MM653. (cell line) | SRR039624(GSM531987) HBV(-) HCV(-) Adjacent Tissue Sample. (liver) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR060986(GSM569190) Human memory B cell [09-001]. (cell line) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR033717(GSM497062) Mentle Cell Lymphoma (MCL112). (B cell) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) | SRR189784 | DRR001489(DRX001043) Hela short nuclear cell fraction, control. (hela) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCCAG....................................................................................... | 23 | 1 | 9.00 | 9.00 | 2.00 | - | 6.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................CTGTTCTCTGCTCTCCCCGCAG.................................................. | 22 | 1 | 5.00 | 5.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................CTGTTCTCTGCTCTCCCCGC.................................................... | 20 | 1 | 5.00 | 5.00 | - | - | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................CTCTGAGGTGTGGCATGAATGAG................................................................................................................................................................................................. | 23 | 1 | 5.00 | 5.00 | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................CTGTTCTCTGCTCTCCCCGCTATC................................................ | 24 | 1 | 4.00 | 5.00 | - | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCCAGT...................................................................................... | 24 | 1 | 4.00 | 9.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................CTGTTCTCTGCTCTCCCCGCAGT................................................. | 23 | 1 | 3.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCCAGCA..................................................................................... | 25 | 1 | 3.00 | 3.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................CTGCTGTTCTCTGCTCTCCCCG..................................................... | 22 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCCAGA...................................................................................... | 24 | 1 | 2.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCC......................................................................................... | 21 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCCAT....................................................................................... | 23 | 1 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..AGGATTGGGCAAGCTGAGGCAGCTGG.............................................................................................................................................................................................................................. | 26 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................AGGGCGTGGCTGTGGTGGGCAGTGGCG........................................................................................................................................................................ | 27 | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGG............................................................................................ | 18 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGC.......................................................................................... | 20 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCCAGTA..................................................................................... | 25 | 1 | 2.00 | 9.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................ATGAGGGCGTGGCTGTGGTGGGCAG............................................................................................................................................................................. | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TGGGTAAGGGAGCAGGGCCAG....................................................................................... | 21 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGT............................................................................................ | 18 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGA........................................................................................... | 19 | 1 | 1.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGAAA......................................................................................... | 21 | 1 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................ATGAGGGCGTGGCTGTGG.................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..AGGATTGGGCAAGCTGAGGCAGG................................................................................................................................................................................................................................. | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..AGGATTGGGCAAGCTGAGGCAGTT................................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........GGGCAAGCTGAGGCAGTTGGAAGC.......................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCCAGAA..................................................................................... | 25 | 1 | 1.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TGAGGCAGTTGGAAGCAGAC...................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................GGTGACCTGAGCTACGTCG......................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................CTGTTCTCTGCTCTCCCCGCAT.................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................CTCTGAGGTGTGGCATGAATGAGG................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................CCACCATGGCGCAGCGC................. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCCAGCAAA................................................................................... | 27 | 1 | 1.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................GGTGTGGCATGAATGAGGGCG............................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................TGAATGAGGGCGTGGCTGTGGTGGGCAG............................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................GTGGCTGTGGTGGGCACGTT.......................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................AGTGGTGACCTGAGCCTGC............................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................TAAGGGAGCAGGGCCAGCAT.................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TGTTCTCTGCTCTCCCCGCAGAAA............................................... | 24 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................AGGTGGAAGGCTTTAGGGC................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCCA........................................................................................ | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................CTGCTGTTCTCTGCTCTCCCCGT.................................................... | 23 | 1 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................CTGTTCTCTGCTCTCCCCGCAGA................................................. | 23 | 1 | 1.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................TGGCATGAATGAGGGCGTGGCGG....................................................................................................................................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................TGGGTAAGGGAGCAGGGCCAGA...................................................................................... | 22 | 1 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .AAGGATTGGGCAAGCTG........................................................................................................................................................................................................................................ | 17 | 3 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.67 | 0.33 | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCT......................................................................................... | 21 | 1 | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCCAGAAA.................................................................................... | 26 | 1 | 1.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCCACTA..................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCCAAA...................................................................................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGGCCAGC...................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................AGGTGTGGCATGAATGAGGGCG............................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCAGGG........................................................................................... | 19 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................CTGGGTAAGGGAGCAGGGCA......................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................ACTCTGAGGTGTGGCATGTATG................................................................................................................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................CTGTTCTCTGCTCTCCCCG..................................................... | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCTGGGTAAGGGAGCA.............................................................................................. | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................CTTTAGGGCCACCATG.......................... | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - |
| ...................................................................................................................................................................CATTCTATCTCACTGC....................................................................... | 16 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - |
| ..........................................................................................................................................................................................TGCTCTCCCCGCAGG................................................. | 15 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 |
| GAAGGATTGGGCAAGCTGAGGCAGTTGGAAGCTACTCTGAGGTGTGGCATGAATGAGGGCGTGGCTGTGGTGGGCAGTGGTGACCTGAGCTACCCCCAAGTATCCGCCCCCAGCCCTGCTCTGGCAGCCCCTGCAGCTGCTCTGGGTAAGGGAGCAGGGCCAGCATTCTATCTCACTGCTGTTCTCTGCTCTCCCCGCAGGTGGAAGGCTTTAGGGCCACCATGGCGCAGCGCCTGGTGCGCGTGCTGCA ........................................................................................................................................((((...(((...((((((((((.(((((...........)))))..))))))))))))))))).................................................. .......................................................................................................................................136.............................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR207113(GSM721075) IP against AGO 1 & 2. (ago1/2 cell line) | SRR207114(GSM721076) IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line) | DRR000557(DRX000315) THP-1 whole cell RNA, after 3 day treatment w. (cell line) | SRR015358(GSM380323) Naïve B Cell (Naive39). (B cell) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR314796(SRX084354) Total RNA, fractionated (15-30nt). (cell line) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | DRR000556(DRX000314) THP-1 whole cell RNA, after 3 day treatment w. (cell line) | SRR189782 | DRR000555(DRX000313) THP-1 whole cell RNA, no treatment. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | DRR000558(DRX000316) THP-1 whole cell RNA, after 3 day treatment w. (cell line) | TAX577742(Rovira) total RNA. (breast) | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR326282(GSM769512) Dicer mRNA was knocked down using siDicer, to. (cell line) | SRR330923(SRX091761) tissue: normal skindisease state: normal. (skin) | SRR029125(GSM416754) U2OS. (cell line) | SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin) | TAX577740(Rovira) total RNA. (breast) | DRR000562(DRX000320) Isolation of RNA following immunoprecipitatio. (ago3 cell line) | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR060982(GSM569186) Human centrocyte [09-001]. (cell line) | SRR040015(GSM532900) G623T. (cervix) | SRR040028(GSM532913) G026N. (cervix) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR038854(GSM458537) MM653. (cell line) | SRR039624(GSM531987) HBV(-) HCV(-) Adjacent Tissue Sample. (liver) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR060986(GSM569190) Human memory B cell [09-001]. (cell line) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR033717(GSM497062) Mentle Cell Lymphoma (MCL112). (B cell) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) | SRR189784 | DRR001489(DRX001043) Hela short nuclear cell fraction, control. (hela) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................TGCTCTGGCAGCCCCTTGG................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................CCAGCCCTGCTCTGGCCTG.......................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................TCACTGCTGTTCTCTGCTCTC......................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................ACCTGAGCTACCCCCAGA...................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |