ID: uc003atr.19
GENE: TRIOBP(19)
chr22:38165145-38165318+


(4)
AGO2.ip 		(1)
B-CELL 		(2)
BRAIN 		(47)
BREAST 		(32)
CELL-LINE 		(4)
CERVIX 		(1)
FIBROBLAST 		(8)
HEART 		(4)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(1)
OTHER 		(51)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CGCTGCGCCGCTGCCAGCAGGAGGGCCAGGAGCTGCTGCGCCACAACCAGGTGGGCCTGGCCCCAGGTTGGGGGGACACGGGTGGGTCCCGGCACCCCTCCCCTGACCACCGTGCCTCTCCCAGGAGCTGCATGGCCGCCTGTCAGAGGAGATAGACCAGCTGCGCGGCTTCAT
...................................................((((...(((....(((..(((((....(((((........))))).)))))..))).....)))...))))...................................................
..................................................51.......................................................................124................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189783SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189787SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029128(GSM416757)
H520. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577744(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577740(Rovira)
total RNA. (breast)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040011(GSM532896)
G529T. (cervix)		TAX577590(Rovira)
total RNA. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR189785SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR189786SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001482(DRX001036)
Hela long total cell fraction, control. (hela)		TAX577738(Rovira)
total RNA. (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037941(GSM510479)
293DroshaTN. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191499(GSM715609)
6genomic small RNA (size selected RNA from to. (breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR191476(GSM715586)
19genomic small RNA (size selected RNA from t. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191546(GSM715656)
152genomic small RNA (size selected RNA from . (breast)		SRR191428(GSM715538)
160genomic small RNA (size selected RNA from . (breast)		GSM956925Ago2D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM532886(GSM532886)
G850T. (cervix)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR343335SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR038856(GSM458539)
D11. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		SRR191402(GSM715512)
43genomic small RNA (size selected RNA from t. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)		DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		SRR343334SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
.......................................................................................................TGACCACCGTGCCTCTCCCAGT.................................................221204.00104.0030.008.007.0011.002.003.002.003.00-5.005.005.004.005.004.00--3.001.001.002.005.001.002.002.002.00--1.003.00-1.001.001.003.002.003.002.003.00-1.001.003.00-2.002.003.001.002.001.003.001.00-1.001.00-2.001.00---2.00--1.00---2.002.001.00--1.00--1.002.00-1.001.001.00---1.001.001.001.00--1.00-1.001.00-1.00-1.001.00-1.00-----1.00-1.00---1.00----1.00-1.00----1.001.00--1.00---1.001.00-1.00-1.00-1.00---1.00---1.00-1.00-1.00--1.00---1.00-1.00-----
.......................................................................................................TGACCACCGTGCCTCTCCCAG..................................................211104.00104.0074.00--4.002.001.001.00------------1.00---1.00-1.00-----1.001.00------1.00-1.00------1.00----------1.00---2.00-------------------------1.001.00-----------1.00--------1.001.00---------1.00------------1.00---1.00--1.001.00-1.00---------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGA.................................................22149.00104.00-6.006.00--3.00-2.00-2.001.002.00---1.003.001.002.00-----1.00---1.00----1.00-----1.001.001.00-1.00-1.00-1.00----------1.00---1.00----1.00----1.00-----------------------------------------------------------1.00----1.00---1.00-----------1.00----1.00---1.00--1.00-
.......................................................................................................TGACCACCGTGCCTCCCAG....................................................1915.000.0010.00-----5.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGTT................................................23115.00104.00---1.00-2.00---1.00--------2.00------1.00-1.00-----1.00------------------1.00----1.00----1.00--------------------1.00----------------------1.00---------1.00--------------------------------------------------
......................................................................................................CTGACCACCGTGCCTCTCCCAGT.................................................23114.003.00--2.001.00------1.00-2.00-1.001.002.00-----1.00---2.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGGGCCTGGCCCCAGGTTGGGGGGACACGGTG...........................................................................................33114.007.006.00---8.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGAA................................................23113.00104.00-5.002.00---------------------------------------------------1.00-----------1.00-----------------------------------------1.00--------------------------------------1.00---------1.00-----1.00---
.......................................................................................................TGACCACCGTGCCTCTCCCA...................................................20112.0012.002.002.00---------------2.00--1.00--1.00---1.00----1.00----------------------1.00---------------1.00-----------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCATT.................................................2219.0012.00-----2.00---1.00------------1.00--------------------------2.00--------------------------------------------------1.00-------------1.00-------------------------------------------------1.00--
..................................................GTGGGCCTGGCCCCAGGTTGGGGGGACACGG.............................................................................................3117.007.005.00---2.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGTA................................................2317.00104.00-1.00-1.00---------------1.00--------------------------------------------------1.00-----1.00--------------------1.00--------------------------------------------------------1.00------------
.......................................................................................................TGACCACCGTGCCTCTCCCCGT.................................................2216.004.00-----------------------1.00-----------------------------1.00------------------1.00----------------------1.00-------1.00------1.00--------------------------------------------------------
..........................................................................................................CCACCGTGCCTCTCCCAGT.................................................196.000.00------------------------------4.00-------------1.00----------------------------------------------------------------------1.00---------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGC.................................................2216.00104.00------1.00--------3.00---------------------------------------------------1.00----------------1.00----------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGTAA...............................................2415.00104.003.00-------------------1.00------------------------------------------------------1.00-------------------------------------------------------------------------------------------
..................................................GTGGGCCTGGCCCCAGGTTGGGGGGACACGGTGG..........................................................................................3415.007.003.00---2.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGTATC..............................................2515.00104.00--------5.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGAT................................................2314.00104.00-------1.00-------------------------------1.00-------------------------------1.00-----------------------------------------------------------------------------1.00-----------------
........................................................................................................GACCACCGTGCCTCTCCCAGTAAC..............................................244.000.00-4.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................CTGACCACCGTGCCTCTCCCAGAATC..............................................2614.003.00--------4.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCC....................................................1914.004.002.00---------------1.00------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
......................................................................................................CTGACCACCGTGCCTCTCCCAGA.................................................2313.003.00---1.00---------------------------------------1.00--------------1.00------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCATA.................................................2213.0012.00-1.00--------------------------2.00------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................CTGACCACCGTGCCTCTCCCAG..................................................2213.003.002.00--------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................CCTCCCCTGACCACCGTGCCTCT.......................................................2313.003.00-------3.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCTTT.................................................2213.004.002.00-------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGTTT...............................................2412.00104.00--2.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAAA.................................................2212.0012.001.00--------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
..................................................GTGGGCCTGGCCCCAGGTTGGGGGGACACGGT............................................................................................3212.007.00------------1.00------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGTCGC..............................................2512.00104.00-2.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
....GCGCCGCTGCCAGCAGGAGGGC....................................................................................................................................................2212.002.00--------------------------2.00--------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGGGCCTGGCCCCAGGTTGGGGGGACACGGGTGGGTCCCGGCACCCCTCCCCTGACCACCGTGCCTCTCCCAGC.................................................752.000.00--------------------------------------------------------------------------2.00--------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAT..................................................2112.0012.00-1.00--------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------
.........................................................................................................................CAGGAGCTGCATGGCTGTC..................................192.000.00------1.00---------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGTATT..............................................2511.00104.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGGGCCTGGCCCCAGGTTGGAAT....................................................................................................2411.001.00-----------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCCGC.................................................2211.004.00--------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------
.............CCAGCAGGAGGGCCAGGAGCTGCTG........................................................................................................................................2511.001.00------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
....................................................................................................................................TGGCCGCCTGTCAGAGGAGATAGAC.................2511.001.00---------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCATTA................................................2311.0012.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCGCAA..................................................211.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................CAGGAGCTGCATGGCCGCCTGTCAGAGGAGAT.....................3211.001.00----------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCTTT...................................................201.000.00-----------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................ACCACCGTGCCTCTCCCAGGTT...............................................221.000.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCACAG..................................................211.000.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................CTGACCACCGTGCCTCTCCCATT.................................................2311.001.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGGGCCTGGCCCCAGGTTGG.......................................................................................................2111.001.00---------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCTCA...................................................201.000.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCACTT................................................2311.0012.00-------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................TCCCGGCACCCCTCCATT......................................................................181.000.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCTA..................................................2111.004.00----------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------
......................................................................................................CTGACCACCGTGCCTCTCCCAT..................................................2211.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGAAT...............................................2411.00104.00--------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGTTA...............................................2411.00104.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGGGCCTGGCCCCAGGTTGGAA.....................................................................................................2311.001.00-------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCATTT................................................2311.0012.00----------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................CTGACCACCGTGCCTCTCCCAGTT................................................2411.003.00------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
................................................................................................................................................AGAGGAGATAGACCAGCTGCG.........2111.001.00-----------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCCGA.................................................2211.004.00---------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCTT..................................................2111.004.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGGGCCTGGCCCCAGGTTGGGGGGACACG..............................................................................................3011.001.00----1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGG.................................................2211.001.00------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGGA................................................2311.001.00----------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------
......................................................................................................CTGACCACCGTGCCTCCCAC....................................................201.000.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................TTGGGGGGACACGGGTGGGTCCCGT..................................................................................251.000.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAAG.................................................2211.0012.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGCT................................................2311.00104.00---------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
........................................................................................................GACCACCGTGCCTCTCCCCGT.................................................211.000.00--------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------
.............CCAGCAGGAGGGCCAGGAGCTG...........................................................................................................................................2211.001.00-----------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------
..........................CAGGAGCTGCTGCGCCACA.................................................................................................................................1911.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------
.....................................................................................................................................GGCCGCCTGTCAGAGGAGA......................1911.001.00----------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------
...........................AGGAGCTGCTGCGCCGGAG................................................................................................................................191.000.00--------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCTCAG..................................................211.000.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................AGGAGATAGACCAGCTGCGCG.......2111.001.00-----------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGAG................................................2311.00104.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGTTTA..............................................2511.00104.00----------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGGGCCTGGCCCCAGGTTGT.......................................................................................................211.000.00---------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCTTTT................................................2311.004.00-----------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
..........................................................GGCCCCAGGTTGGGGGCCA.................................................................................................191.000.00-------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCATC.................................................2211.0012.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGGGCCTGGCCCCAGGTTGGGGGGACACGGGTGGGTCCCGGCACCCCTCCCCTGACCACCGTGCCTCTCCCAGT.................................................751.000.00----------------------------------------------------------------------------------------------------------------------------------------------------------------1.00------
......................................................................................................CTGACCACCGTGCCTCTCCC....................................................2011.001.00--------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCGGT.................................................2211.004.00------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------
......................................................................................................CTGACCACCGTGCCTCTCCCAGC.................................................2311.003.00-------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
...........................................................................................................................................CTGTCAGAGGAGATAGACCA...............2011.001.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCCAGTAG...............................................2411.00104.00------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCATT...................................................201.000.00-------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGGGCCTGGCCCCAGGTTGGA......................................................................................................2211.001.00-------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TCAGAGGAGATAGACCAGCTGCGCGG......2611.001.00------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCC.....................................................1821.001.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................CTGACCACCGTGCCTCTCCCCGT.................................................2311.001.00----------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------
......................................................................................................CTGACCACCGTGCCTCTCCCAGTTCT..............................................2611.003.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................CTGACCACCGTGCCTCTCCCA...................................................2111.001.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................CTGACCACCGTGCCTCTCCCAGATT...............................................2511.003.00-------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCTAG..................................................2120.501.00------0.50----------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCTCCTTAT.................................................2220.501.00-0.50---------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGACCACCGTGCCTCT.......................................................1620.500.50----------------------------------------------------------------------------------------------------------------------------------------------------------------------0.50

Antisense strand
CGCTGCGCCGCTGCCAGCAGGAGGGCCAGGAGCTGCTGCGCCACAACCAGGTGGGCCTGGCCCCAGGTTGGGGGGACACGGGTGGGTCCCGGCACCCCTCCCCTGACCACCGTGCCTCTCCCAGGAGCTGCATGGCCGCCTGTCAGAGGAGATAGACCAGCTGCGCGGCTTCAT
...................................................((((...(((....(((..(((((....(((((........))))).)))))..))).....)))...))))...................................................
..................................................51.......................................................................124................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189783SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189787SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029128(GSM416757)
H520. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577744(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577740(Rovira)
total RNA. (breast)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040011(GSM532896)
G529T. (cervix)		TAX577590(Rovira)
total RNA. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR189785SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR189786SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001482(DRX001036)
Hela long total cell fraction, control. (hela)		TAX577738(Rovira)
total RNA. (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037941(GSM510479)
293DroshaTN. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191499(GSM715609)
6genomic small RNA (size selected RNA from to. (breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR191476(GSM715586)
19genomic small RNA (size selected RNA from t. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191546(GSM715656)
152genomic small RNA (size selected RNA from . (breast)		SRR191428(GSM715538)
160genomic small RNA (size selected RNA from . (breast)		GSM956925Ago2D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM532886(GSM532886)
G850T. (cervix)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR343335SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR038856(GSM458539)
D11. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		SRR191402(GSM715512)
43genomic small RNA (size selected RNA from t. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)		DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		SRR343334SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
.....................................................................................................................CTCCCAGGAGCTGCATTG....................................... 181.000.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................CCGGCACCCCTCCCCCG..................................................................... 171.000.00------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
......................................................................................................................................GCCGCCTGTCAGAG.......................... 1460.330.33----------------0.33------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................CCGGCACCCCTCCCCT...................................................................... 1660.170.17------------------------------------------------------------------------------0.17----------------------------------------------------------------------------------------