ID: uc003ahl.2
GENE: SF3A1(9)
chr22:30737825-30738238-


(2)
AGO1.ip 		(3)
AGO2.ip 		(10)
B-CELL 		(7)
BRAIN 		(13)
BREAST 		(30)
CELL-LINE 		(2)
CERVIX 		(3)
FIBROBLAST 		(7)
HEART 		(4)
HELA 		(4)
LIVER 		(2)
OTHER 		(34)
SKIN 		(1)
XRN.ip

Sense strand
GCATGATTTTGTGGTGGTGGAAACAGTGGACTTCCAACCCAATGAGCAAGGTAGGTCTGTGAGGAGTGACTCCAGATGGGGAGCCAGGAACTCAGACTTCCCGGGAAACCTGGTGCAGGTGTTCCCAGAGAGCAGTAGAATCTCTCAGAGGGCTTTATCAGTGCTGTCTCCTCCCTGCTCCCAAAAGACTTCAGTTCTACCACTTTGCCCAACTTAGATTCAATACGTACTTGCCAGACCCTAGATGGGCCTCTGGAGATAGCTGGAGAGAAAACAGACATGGCCCCAGCCCTTGGGGAGCTCAGACAGGGCAAATAGGTGGGTCTTTGATAAGGAATACCTTTGCCTCTGGCTCACCCTCTAGGGAACTTCCCTCCCCCCACCACGCCAGAGGAGCTGGGGGCCCGAATCCTC
......................................................................................................................................................................................................................................................................................................(((((((.((((...(((((..(((((..((((....))))..)))))))))))))))))).))).......................................................
...............................................................................................................................................................................................................................................................................................288.........................................................................364................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189784SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR037935(GSM510473)
293cand3. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR029126(GSM416755)
143B. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189785DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532874(GSM532874)
G699T. (cervix)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040015(GSM532900)
G623T. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
....................................................................................................................................................................................................................................................................................................................................................CTTTGCCTCTGGCTCACCCTCT....................................................22112.0012.001.00------1.00------1.00-------1.001.00----------------1.00-------------------1.00-----1.00-----1.00--------1.00---1.00--------------------------1.00-------
.....................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTGGCTCACCCTCT....................................................21110.0010.002.00---1.00-1.00-2.00----1.00---------------------------1.00---------------------------1.00-------------------------------------------1.00------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAAATAGGT..............................................................................................28110.0010.002.00-----1.00-----1.00-------1.00-1.00----1.00-1.00---------------------------------1.00-----------------------------------------------1.00--------
.....................................................................................................................................................................................................................................................................................................TGGGGAGCTCAGACAGGGCAAATAGGT..............................................................................................2718.008.00--2.00-1.00-------1.00----------1.00-----------------------------------------1.00-------1.00-------------1.00--------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAA....................................................................................................2218.008.00------------1.001.00------------2.001.00-1.00----1.00-----------------------------------------------------------------------1.00-------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAAATAGGTTT............................................................................................3017.0010.00---------3.00-4.00------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTGGCTCACCCTCTA...................................................2217.007.00------1.00---1.00-------------------1.00----------------1.00---1.00-----1.00----------------------------------------------1.00---------------
.....................................................................................................................................................................................................................................................................................................TGGGGAGCTCAGACAGGGCAA....................................................................................................2116.006.001.00--------------------2.00-------------1.00--------------------1.00--------------------------------------1.00------------------------
.....................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTGGCTCACCCTCTAT..................................................2316.007.001.00-----------------------------------1.00-------------------------------1.00-1.00------------1.00-------1.00----------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGAGGAGCTGGGGGCC.........2015.005.00-5.00----------------------------------------------------------------------------------------------------------------------
........TTGTGGTGGTGGAAACAGTGGAC...............................................................................................................................................................................................................................................................................................................................................................................................2315.005.00-5.00----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................TGGGGAGCTCAGACAGGGCAAATAG................................................................................................2514.004.00---2.00------------------------------------------------------------------------------1.00-------------1.00-----------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAAAT..................................................................................................2414.004.00-------------------------------2.00----------------------1.00--------------------------------------------------1.00--------------
.....................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTGGCTCACCCTC.....................................................2014.004.00-------1.00--2.00-----------------------------------------------------------------1.00-------------------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAAATAGG...............................................................................................2714.004.002.00---1.00-------------------1.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTGGCTCACCCTCTAG..................................................2313.003.00---1.00---------------------------------------------1.00------------------------------------------1.00---------------------------
....................................................................................................................................................................................................................................................................................................................................................CTTTGCCTCTGGCTCACCCTC.....................................................2113.003.001.00--------------------------------1.00-------------------------------------------------------1.00------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTGGCTCACCCTCTAA..................................................2313.007.00------------------------------1.00-1.00--------------------------1.00------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAAATAG................................................................................................2613.003.00--------1.00----------------------------2.00----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................TGGGGAGCTCAGACAGGGCAAAT..................................................................................................2313.003.003.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTGGCTCACCCTCTT...................................................2213.0010.00------------------------1.00------------------------------1.00----------------------------------1.00-----------------------------
.....................................................................................................................................................................................................................................................................................................TGGGGAGCTCAGACAGGGCAAATA.................................................................................................2412.002.00--1.00-----------------------------------------------------------------------1.00---------------------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAAT...................................................................................................2312.008.00----------------------------1.00------------------------------------------1.00------------------------------------------------
....................................................................................................................................CAGTAGAATCTCTCAGAGGGCT....................................................................................................................................................................................................................................................................2212.002.00-------1.00-------------------------------------------------------------------------------------1.00--------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAAACAG................................................................................................2612.001.00---1.00--------------------------------------1.00-----------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................CTTGGGGAGCTCAGACAGGGCA.....................................................................................................2212.002.00-----------------------------------1.00-------------------------------------------------------------------------1.00----------
.....................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTGGCTCACCCTCTTA..................................................2312.0010.00------------------2.00-----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCA.....................................................................................................2112.002.00---------------------------------------1.00----------1.00---------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................TGGGGAGCTCAGACAGGGCAAATAGG...............................................................................................2612.002.00---------------------------------------------1.00----------------------------------1.00---------------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAAATTA................................................................................................2611.004.00-------------------------------------------1.00----------------------------------------------------------------------------
........TTGTGGTGGTGGAAACAGTGG.................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------------------------------------------------------------------------------1.00----------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTGGCTCACCCTCTATT.................................................2411.007.00---------------1.00--------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................CCACGCCAGAGGAGCTGGGGG...........2111.001.00---------------------------------------------------------------------------1.00--------------------------------------------
.........TGTGGTGGTGGAAACAGTGGACTCCC...........................................................................................................................................................................................................................................................................................................................................................................................261.000.00------------------------------------------------------------------------------------------------------------------1.00-----
.....................................................................................................................................................................................................................................................................................................TGGGGAGCTCAGACAGGGCAAACAG................................................................................................251.000.00------------------------------------------------------------------------------------------------------------1.00-----------
.....................................................................................................................................................................................................................................................................................................TGGGGAGCTCAGACAGGGCGAA...................................................................................................2211.001.00----------------------------------1.00-------------------------------------------------------------------------------------
.........................GTGGACTTCCAACCCAATGAGCA..............................................................................................................................................................................................................................................................................................................................................................................2311.001.00-----1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................CTTTGCCTCTGGCTCACCCT......................................................2011.001.00-----1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................CTTTGCCTCTGGCTCACCCTCTAT..................................................2411.001.00------1.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TGCTCCCAAAAGACTTCAGTTCT........................................................................................................................................................................................................................2311.001.00----------------1.00-------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAT....................................................................................................2211.002.00----1.00-------------------------------------------------------------------------------------------------------------------
.......................CAGTGGACTTCCAACCCAATGAGCAAG............................................................................................................................................................................................................................................................................................................................................................................2711.001.00--------------------------------------1.00---------------------------------------------------------------------------------
....................AAACAGTGGACTTCCAACCCAATGAGCAAG............................................................................................................................................................................................................................................................................................................................................................................3011.001.00--------------1.00---------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAAATAGA...............................................................................................2711.003.00--1.00---------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGCTGGGGGCCCGAATCCT.2311.001.00-------------------------------------------------------------1.00----------------------------------------------------------
....GATTTTGTGGTGGTGTAAA.......................................................................................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------------------------------------------------------------------1.00--------------------
......................................................................................................................................GTAGAATCTCTCAGAGGGCT....................................................................................................................................................................................................................................................................2011.001.00-------------1.00----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................CTTTGCCTCTGGCTCACCCTCTA...................................................2311.001.00----------------------------------------------------------------------------------------1.00-------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGG........................................................................................................1811.001.00------------1.00-----------------------------------------------------------------------------------------------------------
.CATGATTTTGTGGTGGTGGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................221.000.00-------------------------------------------------------------------1.00----------------------------------------------------
........TTGTGGTGGTGGAAACAGGG..................................................................................................................................................................................................................................................................................................................................................................................................201.000.00----------------------------------------------------1.00-------------------------------------------------------------------
..........................................................................................................................................................................CTCCCTGCTCCCAAAAAA..................................................................................................................................................................................................................................181.000.00----------------1.00-------------------------------------------------------------------------------------------------------
.................TGGAAACAGTGGACTTCCAAT........................................................................................................................................................................................................................................................................................................................................................................................211.000.00------------------------------------------------------------------------------1.00-----------------------------------------
.....................................................................................................................................................................................................................................................................................................TGGGGAGCTCAGACAGGGCATGT..................................................................................................231.000.00-------------------------1.00----------------------------------------------------------------------------------------------
.........TGTGGTGGTGGAAACAGTGGAGTT.............................................................................................................................................................................................................................................................................................................................................................................................241.000.00-----------------1.00------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGG.......................................................................................................1911.001.00-----------------1.00------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGGGAT...................................................................................................2311.001.00------------------------------------------------1.00-----------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................TTCCCTCCCCCCACCACTCAC........................211.000.00---1.00--------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAAATAGGGTT............................................................................................3011.004.00---------1.00--------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................CCTTGGGGAGCTCAGACAGGG.......................................................................................................2111.001.00--------------------------------------------------------------------------------------------------------------1.00---------
...................................................................................................................................................................................................................................................................................................................................................CCTTTGCCTCTGGCTCACCCTCT....................................................2311.001.00-----1.00------------------------------------------------------------------------------------------------------------------
..............................................................................................................................AGAGAGCAGTAGAATCTCTCAGAGG.......................................................................................................................................................................................................................................................................2511.001.00----------------------------------------------------------------------------------------------------1.00-------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCTGGGGGCCCGAATC...2011.001.00-----------------------------------------------------------------------------------------------------1.00------------------
..............................................................................................................................................................................................................................................................................................................................................................................AACTTCCCTCCCCCCCCCT.............................191.000.00-----------------------------------------------------1.00------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................CCTTTGCCTCTGGCTCACCCT......................................................2111.001.00---------------------------------1.00--------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTGGCTCACCCCCTT...................................................221.000.00---1.00--------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTGGCTCACCCTA.....................................................201.000.00----------------1.00-------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAGGAGCTGGGGGCCCGAATC...2211.001.00---------------------------------------1.00--------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TTGCCTCTGGCTCACCCTCT....................................................2011.001.00--------------------------------1.00---------------------------------------------------------------------------------------
............................GACTTCCAACCCAATGAGCAAG............................................................................................................................................................................................................................................................................................................................................................................2211.001.00--------------1.00---------------------------------------------------------------------------------------------------------
..............TGGTGGAAACAGTGGACTTCC...........................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--------------------------------------1.00---------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTGGCTCACCCTCTAGT.................................................2411.003.00--------------------------------------------1.00---------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTGGCTCACCCTCTAC..................................................2311.007.00--------------------------------------------------------------1.00---------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................ATACCTTTGCCTCTGCTTT...........................................................191.000.00-----------------1.00------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAAATA.................................................................................................2511.001.00----------------------------------------------------------------------------------------------1.00-------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAAATAGT...............................................................................................2711.003.00------------------------------------------------------------------------------------1.00-----------------------------------
...................................................................................................................................................................................................................................................................................................CTTGGGGAGCTCAGACAGGGC......................................................................................................2111.001.00-------1.00----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................TTTGATAAGGAATACCTTTG.....................................................................2011.001.00--------1.00---------------------------------------------------------------------------------------------------------------
..............................................................................................................................AGAGAGCAGTAGAATTCTG.............................................................................................................................................................................................................................................................................191.000.00----------------------------------------------------------1.00-------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................TGGGGAGCTCAGACAGGGAAT....................................................................................................211.000.00--------------------1.00---------------------------------------------------------------------------------------------------
..........GTGGTGGTGGAAACAGTG..................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-------------------------------------------------------------------------------------------------------------------1.00----
................................................................................................................................................................................................................................................................................................................................................................................................ACGCCAGAGGAGCTGGGGGC..........2011.001.00--1.00---------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAAATAGGTA.............................................................................................2911.0010.00-------------------------------------------------------------------------------------------------1.00----------------------
......................................................................................................................................................................................................................................................................................................................................................TTGCCTCTGGCTCACCCTCTA...................................................2111.001.00-------------------------------------------------------------------------------------------------------1.00----------------
.....................................................................................................................................................................................................................................................................................................TGGGGAGCTCAGACAGGGCAATAG.................................................................................................2411.006.00-------------------1.00----------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGCTGGGGGCCCGT......181.000.00-----------------------------------------------------------------------------------------------------------1.00------------
....................................................................................................................................................................................................................................................................................................................................................CTTTGCCTCTGGCTCACCCTCTTTA.................................................2511.0012.00-----------------------------------------------------------------------------1.00------------------------------------------
........................AGTGGACTTCCAACCCAATGAGCAAGG...........................................................................................................................................................................................................................................................................................................................................................................2711.001.00---------------1.00--------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACAGGGCAAA...................................................................................................2311.001.00-------------------------1.00----------------------------------------------------------------------------------------------
....GATTTTGTGGTGGTGGAAACAGTGGACT..............................................................................................................................................................................................................................................................................................................................................................................................2811.001.00-----1.00------------------------------------------------------------------------------------------------------------------
.......TTTGTGGTGGTGGAAACAGTGGACT..............................................................................................................................................................................................................................................................................................................................................................................................2511.001.00--1.00---------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................AGTAGAATCTCTCAGAGG.......................................................................................................................................................................................................................................................................1811.001.00------------------------------------1.00-----------------------------------------------------------------------------------
..........................TGGACTTCCAACCCAATGAGCAAG............................................................................................................................................................................................................................................................................................................................................................................2411.001.00---------------1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................TGGGGAGCTCAGACAGGGC......................................................................................................1911.001.00-------------------1.00----------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................TCTGGAGATAGCTGGTTC.................................................................................................................................................181.000.00----------------------------1.00-------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................CTTTGCCTCTGGCTCACCCTCA....................................................2211.003.00----1.00-------------------------------------------------------------------------------------------------------------------
...............GGTGGAAACAGTGGACTTC............................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--------------------------------------------------------------------------------------------------1.00---------------------
...................................................................................................................................................................................................................................................................................................................................................CCTTTGCCTCTGGCTCACCCTC.....................................................2211.001.00----------1.00-------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTGGCTCACCCTCTTT..................................................2311.0010.00----------------------------------------------1.00-------------------------------------------------------------------------
................................................AGGTAGGTCTGTGAG...............................................................................................................................................................................................................................................................................................................................................................1570.430.43-0.43----------------------------------------------------------------------------------------------------------------------
........................AGTGGACTTCCAACC.......................................................................................................................................................................................................................................................................................................................................................................................1530.330.33-----0.33------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TTGGGGAGCTCAGACA..........................................................................................................1630.330.33--------------------------------------------------------------------------------------------------------------------0.33---
................GTGGAAACAGTGGAC...............................................................................................................................................................................................................................................................................................................................................................................................1560.170.17--0.17---------------------------------------------------------------------------------------------------------------------
....................................................................................................CCGGGAAACCTGGT............................................................................................................................................................................................................................................................................................................1470.140.14----------------------------------------------------------------------------------------------------------------------0.14-
.......................................................................CCAGATGGGGAGCCA........................................................................................................................................................................................................................................................................................................................................15100.100.10---0.10--------------------------------------------------------------------------------------------------------------------
...................................AACCCAATGAGCAAG............................................................................................................................................................................................................................................................................................................................................................................15100.100.10---------------------------------------------------------------------------------------------------------------------0.10--

Antisense strand
GCATGATTTTGTGGTGGTGGAAACAGTGGACTTCCAACCCAATGAGCAAGGTAGGTCTGTGAGGAGTGACTCCAGATGGGGAGCCAGGAACTCAGACTTCCCGGGAAACCTGGTGCAGGTGTTCCCAGAGAGCAGTAGAATCTCTCAGAGGGCTTTATCAGTGCTGTCTCCTCCCTGCTCCCAAAAGACTTCAGTTCTACCACTTTGCCCAACTTAGATTCAATACGTACTTGCCAGACCCTAGATGGGCCTCTGGAGATAGCTGGAGAGAAAACAGACATGGCCCCAGCCCTTGGGGAGCTCAGACAGGGCAAATAGGTGGGTCTTTGATAAGGAATACCTTTGCCTCTGGCTCACCCTCTAGGGAACTTCCCTCCCCCCACCACGCCAGAGGAGCTGGGGGCCCGAATCCTC
......................................................................................................................................................................................................................................................................................................(((((((.((((...(((((..(((((..((((....))))..)))))))))))))))))).))).......................................................
...............................................................................................................................................................................................................................................................................................288.........................................................................364................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189784SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR037935(GSM510473)
293cand3. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR029126(GSM416755)
143B. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189785DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532874(GSM532874)
G699T. (cervix)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040015(GSM532900)
G623T. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
.............................................................................................................................................................TCAGTGCTGTCTCCTGTG............................................................................................................................................................................................................................................... 181.000.00------------------------------------------------------------------------------------------------------1.00-----------------
...........................................................................................................................................................................................ACTTCAGTTCTACCACTTTGCCCAACTTAGA.................................................................................................................................................................................................... 3111.001.00--1.00---------------------------------------------------------------------------------------------------------------------
.................................................................................................TTCCCGGGAAACCTGTA............................................................................................................................................................................................................................................................................................................ 171.000.00----------------------------------------------------------------1.00-------------------------------------------------------
...................................................................................................................................................................................................................................................................................AGACATGGCCCCAGCCAAGT....................................................................................................................... 201.000.00--------------------------------------------------------------------------------------1.00---------------------------------
.................................................................................................................................................................................................GTTCTACCACTTTGC.............................................................................................................................................................................................................. 1560.170.17----------------------------------------0.17-------------------------------------------------------------------------------
...........................................................................................................................................................................................ACTTCAGTTCTACCA.................................................................................................................................................................................................................... 1570.140.14---------------------------------------------------------------------------------------------------------------------0.14--
..........................................................................................................................................................................CTCCCTGCTCCCAAAA.................................................................................................................................................................................................................................... 16100.100.10-----------------------------------------------------------------------------------------------------------------------0.10