ID: uc002pem.9
GENE: PPP5C(9)
chr19:46891656-46891859+


(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(18)
B-CELL 		(3)
BRAIN 		(11)
BREAST 		(32)
CELL-LINE 		(2)
CERVIX 		(6)
HEART 		(1)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(22)
SKIN 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
CCCCACCAGGGCCCATGTGTGACCTGCTCTGGTCAGATCCACAGCCACAGGTGAGTCTAGGGTGGGGTGCAGGGCCGGCGGGTGTGGGCTGTGGCAGCAGGTGGAGGCAGACAGTCACCCTGAACCCCTGTCTCTCCCTTCTGCCCACCCTCAGAACGGGCGCTCGATCAGCAAGCGGGGCGTGAGCTGTCAGTTTGGGCCTGA
..................................................................................((.(((.((.(((((.(((..(((((((....((.....))....)))))))..))).)))))))))).))...................................................
...............................................................................80........................................................................154................................................
SizePerfect hitTotal NormPerfect NormSRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR038860(GSM458543)
MM426. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		TAX577579(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR189786SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577738(Rovira)
total RNA. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR040016(GSM532901)
G645N. (cervix)		TAX577745(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
....................................................................................TGGGCTGTGGCAGCAGGTGGAG..................................................................................................22122.0022.001.004.00---1.00--1.003.001.00---1.00----------------1.00---1.00--------1.00-1.00-----------1.001.00---1.00----------------------------1.00-1.00-------1.00------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGG.................................................................................................23111.0011.001.002.00--4.001.00--1.00-------------------------1.00----------------1.00---------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGGC................................................................................................24110.0010.001.00------3.00----------------2.00--------------------1.00-----1.00---------------------------1.00----------------1.00------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGA.................................................................................................2319.0022.00--1.003.00------------1.00-----------------------1.00-----------1.00---------1.00-----------------1.00----------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGG....................................................................................................2017.007.001.00-----4.00---------1.00----------------------------------------------------1.00---------------------------------------
.........................................................................................TGTGGCAGCAGGTGGAGGCAGA.............................................................................................2216.006.00---------------------------------------1.001.00--------------1.00-----1.00---1.00-----1.00-------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGA...................................................................................................2116.006.00-1.001.00---1.00-------------------------1.00-------------------------------------------1.00-1.00------------------------------
........................................................................................CTGTGGCAGCAGGTGGAGGCAGA.............................................................................................2316.006.00-----------3.00---------------------------------1.00----------1.00-----------------------------------------1.00----------
......................................................................................................................................................................................TGAGCTGTCAGTTTGGGCC...1916.006.00----6.00--------------------------------------------------------------------------------------------------------
................................................................................................................................TGTCTCTCCCTTCTGCCCACC.......................................................2115.005.001.00---------------------------2.00-----------------------1.00-------1.00------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGGAT..................................................................................................2415.005.00-----1.00------1.00----1.00--------------------------------2.00----------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAA..................................................................................................2215.006.00--------1.00---------------------2.00----------------------------------------------------------1.00-1.00-----------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGGA...................................................................................................2315.005.00------------1.00-------2.00------------------1.00-----------------1.00---------------------------------------------------
............................................................................................................................................................CGGGCGCTCGATC...................................1324.004.00-------------4.00-----------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAAA.................................................................................................2314.006.00--1.00----1.00-----------1.00--------------------------------------------------1.00--------------------------------------
............................................................................................GGCAGCAGGTGGAGGCAGACA...........................................................................................2114.004.00----------4.00--------------------------------------------------------------------------------------------------
.........................................................................................TGTGGCAGCAGGTGGAGGCAGAAT...........................................................................................2413.006.00-----------------1.00-------1.00---1.00-------------------------------------------------------------------------------
....................................................................................................................................TCTCCCTTCTGCCCACCCTCAGT.................................................233.000.00------------------3.00------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGT.................................................................................................2313.0022.00--1.00-----1.00-----1.00----------------------------------------------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGTAA..................................................................................................2413.001.00--2.00---------------------------------------------------------------------------------------1.00------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGGG..................................................................................................2213.007.001.00----1.001.00------------------------------------------------------------------------------------------------------
.........................................................................................TGTGGCAGCAGGTGGAGGCAG..............................................................................................2113.003.00------------------------------------------------2.00--------------------------------1.00---------------------------
..........................................................................................GTGGCAGCAGGTGGAGGCAGA.............................................................................................2112.002.00-2.00-----------------------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGAAT...............................................................................................2512.0022.00--2.00----------------------------------------------------------------------------------------------------------
..............................................................................................................ACAGTCACCCTGAACTCTG...........................................................................192.000.00---------------2.00---------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGGT................................................................................................2412.0011.00-------2.00-----------------------------------------------------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGGGT..................................................................................................2412.002.00------------1.00-------1.00----------------------------------------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGG.......................................................................................................1912.002.00--------------------------1.00-----1.00----------------------------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGG....................................................................................................2212.002.00----------------1.00-----1.00--------------------------------------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGGAAA.................................................................................................2512.005.00------------1.00------------------------------------1.00-----------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGGG.....................................................................................................2112.002.001.00-----1.00------------------------------------------------------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGGGG....................................................................................................2212.002.001.00--1.00---------------------------------------------------------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGT......................................................................................................2012.002.001.00------------------------------------------------1.00-----------------------------------------------------------
......................................................................................................................................TCCCTTCTGCCCACCCTCAGA.................................................2112.002.00---------------------------------2.00---------------------------------------------------------------------------
...........................................................................................TGGCAGCAGGTGGAGGCAGACA...........................................................................................2212.002.00-1.00-------1.00---------------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGGCA...............................................................................................2512.002.00-1.00-------------------------------------------------------------------------------------------------1.00---------
..................................................................................................................................TCTCTCCCTTCTGCCCACCCTCA...................................................2312.002.00---1.00-------------------------------------------------------------------------------1.00-------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGAA................................................................................................2412.0022.00-----1.00--1.00----------------------------------------------------------------------------------------------------
..........................................................................CCGGCGGGTGTGGG....................................................................................................................1451.401.40------------------------0.20------------------------------0.20-----------------------------------------------0.40-0.200.200.20-
................................................................................................................................TGTCTCTCCCTTCTGCCCACCA......................................................2211.005.00-------------------------------------------------------------------------1.00-----------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGGTTT..............................................................................................2611.0011.00---1.00---------------------------------------------------------------------------------------------------------
.........................................................TAGGGTGGGGTGCAGGGGGAT..............................................................................................................................211.000.00---------------------1.00---------------------------------------------------------------------------------------
.........................................................................................TGTGGCAGCAGGTGGGGAA................................................................................................191.000.00------------------------------------------1.00------------------------------------------------------------------
...............................................................................................................................CTGTCTCTCCCTTCTGCCCACCC......................................................2311.001.00------------------------------------1.00------------------------------------------------------------------------
.........................................................................................TGTGGCAGCAGGTGGAGGCAGT.............................................................................................2211.003.00-----1.00-------------------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGGCATAA............................................................................................2811.002.00------1.00------------------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGGCT...............................................................................................2511.0010.00-------------------------------------------1.00-----------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTG.....................................................................................................1911.001.00--------------1.00----------------------------------------------------------------------------------------------
.......................................................................................................................................................CAGAACGGGCGCTCGATCAGCAAGCGG..........................2711.001.00-----------------------------------------------1.00-------------------------------------------------------------
.................................................................................GTGTGGGCTGTGGCAGCAGGTGGAAT.................................................................................................261.000.00-1.00-----------------------------------------------------------------------------------------------------------
................................................................................................................................TGTCTCTCCCTTCTGCCCACCC......................................................2211.001.00--------------------------------------------------------------------1.00----------------------------------------
.......................................................................................................................................................CAGAACGGGCGCTCGATCA..................................1911.001.00-------------------------------------------------------------------------------------1.00-----------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGGTA...............................................................................................2511.0011.001.00------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AGCGGGGCGTGAGCTGTCAGC..........211.000.00---------------------------------------------------------------------------------------1.00---------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGGAG..................................................................................................2411.001.00-----------------------------------------------------------------------------------------------------1.00-------
................................................................................GGTGTGGGCTGTGGCAGCAGGTGGAC..................................................................................................261.000.00----------------------------------------------------------------------------------1.00--------------------------
................................................................................................................................TGTCTCTCCCTTCTGCCCACCCTT....................................................241.000.00-------------------------------------1.00-----------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGGCAA..............................................................................................2611.002.00----------------------1.00--------------------------------------------------------------------------------------
..................................................................................................................................TCTCTCCCTTCTGCCCACCCTC....................................................2211.001.00-------------------1.00-----------------------------------------------------------------------------------------
...........................................................................................................................................................ACGGGCGCTCGATCAGCAAGCGGG.........................2411.001.00-----------------------------------------------1.00-------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGATA.................................................................................................2311.006.00---------1.00---------------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGGCAT..............................................................................................2611.002.00--1.00----------------------------------------------------------------------------------------------------------
.........................................................................................TGTGGCAGCAGGTGGAGGT................................................................................................191.000.00----------------------------------------------------------------------------------------------------1.00--------
.........................................................................................TGTGGCAGCAGGTGGAGGA................................................................................................191.000.00---------------------------1.00---------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGGGA.................................................................................................2311.007.001.00------------------------------------------------------------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGGAA..................................................................................................2411.005.001.00------------------------------------------------------------------------------------------------------------
..........................................................AGGGTGGGGTGCAGGGGCA...............................................................................................................................191.000.00---------------------1.00---------------------------------------------------------------------------------------
................................................................................................................................TGTCTCTCCCTTCTGCCCAC........................................................2011.001.00-----------------------------------------------------------------------------------------------1.00-------------
...........................................................................................TGGCAGCAGGTGGAGGCAGAC............................................................................................2111.001.00-------------------------------------------------------------------1.00-----------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGGTTA..............................................................................................2611.0011.001.00------------------------------------------------------------------------------------------------------------
.........................................................................................TGTGGCAGCAGGTGGAGGCAGAAA...........................................................................................2411.006.00-------------------1.00-----------------------------------------------------------------------------------------
...........................................................................................................................................................ACGGGCGCTCGATCAGCAAGCGGGGCG......................2711.001.00---1.00---------------------------------------------------------------------------------------------------------
................................................................................................................................................................CGCTCGATCAGCAAGCGGGGCGT.....................2311.001.00-----------------1.00-------------------------------------------------------------------------------------------
..................................................................................................................................TCTCTCCCTTCTGCCCACCCTT....................................................221.000.00---1.00---------------------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGT......................................................................................................1811.001.00---------------------------1.00---------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGGAA.................................................................................................2311.007.00-----1.00-------------------------------------------------------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGT....................................................................................................2211.001.00----------------------------------1.00--------------------------------------------------------------------------
.........................................................................................TGTGGCAGCAGGTGGAGGCAGTAG...........................................................................................2411.003.00---------------------------------------------------------------------------1.00---------------------------------
................................................................................................................................TGTCTCTCCCTTCTGCCCACCCTTT...................................................251.000.00-------------------------------------1.00-----------------------------------------------------------------------
.....................ACCTGCTCTGGTCAGATCCACAGCCA.............................................................................................................................................................2611.001.00----------------------------------------------------------------1.00--------------------------------------------
..........................................................................................................................................................AACGGGCGCTCGATCAGC................................1811.001.00---------------1.00---------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGGGGA................................................................................................2411.007.00-----1.00-------------------------------------------------------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTG.....................................................................................................2111.001.00-----------------------1.00-------------------------------------------------------------------------------------
.......................................................................................................................................................CAGAACGGGCGCTCGATCAGCAAGCGGGGCGTG....................3311.001.00---1.00---------------------------------------------------------------------------------------------------------
.................................................................................GTGTGGGCTGTGGCAGCAGG.......................................................................................................2011.001.00------------------------------------------------------------------------------------1.00------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGAAA...............................................................................................2511.0022.00--------------------------------------------------------------------------1.00----------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGA....................................................................................................2211.001.00--1.00----------------------------------------------------------------------------------------------------------
.........................................................................................TGTGGCAGCAGGTGGAGGC................................................................................................1911.001.00-----------------------------------1.00-------------------------------------------------------------------------
.........................................................................................TGTGGCAGCAGGTGGAGGCAGACATT.........................................................................................261.000.00-----------------------------------------------------1.00-------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGGAAAA................................................................................................2611.005.00----------------------1.00--------------------------------------------------------------------------------------
............................................................................GGCGGGTGTGGGCTGGATT.............................................................................................................191.000.00---------------------------------------------------------------------------------------------1.00---------------
....................................................................................TGGGCTGTGGCAGCAGCGGG....................................................................................................201.000.00----------------------------------------------1.00--------------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGGATT.................................................................................................2511.005.00--------------------------1.00----------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAAG.................................................................................................2311.006.001.00------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................GATCAGCAAGCGGGGCGTGA...................2011.001.00------------------------------------------------------------------------1.00------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGGAAT.................................................................................................2511.005.00--------------1.00----------------------------------------------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGGAAGAA...............................................................................................2711.005.00-------------------------------1.00-----------------------------------------------------------------------------
.........................................................TAGGGTGGGGTGCAGGAGGA...............................................................................................................................201.000.00-----------------------1.00-------------------------------------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGGAGG.......................................................................................................191.000.001.00------------------------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGGCACT.............................................................................................2711.002.00------------------------------------------------------1.00------------------------------------------------------
......................................................................................................................................................................ATCAGCAAGCGGGGCGTGAG..................2011.001.00-------------------------1.00-----------------------------------------------------------------------------------
................................................................................................................................TGTCTCTCCCTTCTGCCCATA.......................................................211.000.00------------------------------------------------------------------1.00------------------------------------------
........................................................................................CTGTGGCAGCAGGTGGAGGCAG..............................................................................................2211.001.00------------------------------------------1.00------------------------------------------------------------------
...................................................................................................................CACCCTGAACCCCTGCGA.......................................................................181.000.00--------------------------------------------------------------------------------------1.00----------------------
.........................................................................................................................................................GAACGGGCGCTCGATCAGC................................1911.001.00-----------------------------------------------------------------------------1.00-------------------------------
........................................................................................CTGTGGCAGCAGGTGGAGGCAGAAT...........................................................................................2511.006.00-----------1.00-------------------------------------------------------------------------------------------------
..................................................................................................................................TCTCTCCCTTCTGCCCACC.......................................................1911.001.00---1.00---------------------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGGA..................................................................................................2211.007.00-----------------------------1.00-------------------------------------------------------------------------------
...........................................................................................TGGCAGCAGGTGGAGGCAGACAGA.........................................................................................241.000.00----------------------------------------------------------------------------------------1.00--------------------
...........................................................................................................................................................................CAAGCGGGGCGTGAGCT................1711.001.00-----------------------------------------1.00-------------------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGGTGGAAGT................................................................................................2611.005.001.00------------------------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGGAA...............................................................................................2511.0011.00-------------------------------------------1.00-----------------------------------------------------------------
..........................................................AGGGTGGGGTGCAGGGGCG...............................................................................................................................191.000.00---------------------1.00---------------------------------------------------------------------------------------
.................................................................................GTGTGGGCTGTGGCAGCAGGT......................................................................................................2111.001.001.00------------------------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGGGC.................................................................................................2311.007.001.00------------------------------------------------------------------------------------------------------------
........................................................................................................................................................AGAACGGGCGCTCGATCAGCAAG.............................2311.001.00-----------------------------------------1.00-------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGTGGAGTAA...............................................................................................2511.0022.00--------------------------------------------1.00----------------------------------------------------------------
.............CATGTGTGACCTGCTCTGGTCAGATCCACAGCCACAGA.........................................................................................................................................................381.000.00------------------------------------1.00------------------------------------------------------------------------
...........................................................................................TGGCAGCAGGTGGAGGCAGA.............................................................................................2011.001.00-------------------------------------------------------------------------------------------------1.00-----------
..................................................................................TGTGGGCTGTGGCAGCAG........................................................................................................1830.330.33-----------------------------------------------------0.33-------------------------------------------------------
..................................................................................TGTGGGCTGTGGCAGCAGCGG.....................................................................................................2130.330.33------------------------------------------------------0.33------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGGGGA...................................................................................................2150.200.20----------------0.20--------------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGG.......................................................................................................1750.200.20------------------------------------------------------------------------------------------------------------0.20
....................................................................................TGGGCTGTGGCAGCAGGGG.....................................................................................................1950.200.20-----------------------0.20-------------------------------------------------------------------------------------
....................................................................................TGGGCTGTGGCAGCAGGGGG....................................................................................................2050.200.200.20------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................GTCAGTTTGGGCCTG.1560.170.17---------------0.17---------------------------------------------------------------------------------------------
.......................................................................................................................................................CAGAACGGGCGCT........................................1360.170.17-------------------------0.17-----------------------------------------------------------------------------------
.................................CAGATCCACAGCCACAG..........................................................................................................................................................1770.140.14-----------------0.14-------------------------------------------------------------------------------------------

Antisense strand
CCCCACCAGGGCCCATGTGTGACCTGCTCTGGTCAGATCCACAGCCACAGGTGAGTCTAGGGTGGGGTGCAGGGCCGGCGGGTGTGGGCTGTGGCAGCAGGTGGAGGCAGACAGTCACCCTGAACCCCTGTCTCTCCCTTCTGCCCACCCTCAGAACGGGCGCTCGATCAGCAAGCGGGGCGTGAGCTGTCAGTTTGGGCCTGA
..................................................................................((.(((.((.(((((.(((..(((((((....((.....))....)))))))..))).)))))))))).))...................................................
...............................................................................80........................................................................154................................................
SizePerfect hitTotal NormPerfect NormSRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR038860(GSM458543)
MM426. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		TAX577579(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR189786SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577738(Rovira)
total RNA. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR040016(GSM532901)
G645N. (cervix)		TAX577745(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
...................................................................TGCAGGGCCGGCGGGTGT....................................................................................................................... 182.000.00--------------------------------------2.00----------------------------------------------------------------------
...............................................................................................................................................................GCGCTCGATCAG................................. 12100.500.50---------------0.40----------------------------------------0.10----------------------------------------------------
.................................................................GGTGCAGGGCCGGCG............................................................................................................................ 1540.250.25--------------------------------------------------------------------------------------------------------0.25----