ID: uc002pcg.11
GENE: VASP(11)
chr19:46029212-46029447+


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(4)
AGO2.ip 		(1)
AGO3.ip 		(11)
B-CELL 		(1)
BRAIN 		(8)
BREAST 		(34)
CELL-LINE 		(5)
CERVIX 		(3)
FIBROBLAST 		(7)
HEART 		(4)
HELA 		(11)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(18)
SKIN 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
GGAAGAGGTGAAGAAGGAATTGCAGAAAGTGAAAGAGGAAATCATTGAAGGTGAGGTGGTTTGCTTTGGTTTTGTTCTTAAACATTTACTTATTTTGGAGGCATCATGTCCCTGGGCAAGAGCCCTGTTTTGGAAGGGAGGAGGCAGAGACTCTGCCCCTGACCTCTGCTCCTTGTTTCCTTCCAGCCTTCGTCCAGGAGCTGAGGAAGCGGGGTTCTCCCTGACCACAGGGACCC
.................................................................................................................................(((((((((((((.((((((..((.......)).)))))))))))....))))))))..................................................
...........................................................................................................................124.................................................................192..........................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR029127(GSM416756)
A549. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189786GSM416733(GSM416733)
HEK293. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040021(GSM532906)
G761T_2. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		TAX577453(Rovira)
total RNA. (breast)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR189784SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR189782SRR038855(GSM458538)
D10. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR037931(GSM510469)
293GFP. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR189787SRR040035(GSM532920)
G001T. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)		GSM532887(GSM532887)
G761N. (cervix)		SRR029129(GSM416758)
SW480. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
................................................................................................................................TTTGGAAGGGAGGAGGCAGAGA......................................................................................22123.0023.00--2.00---2.00---1.00----1.00--1.00-2.00---1.00-1.00----2.00------------1.00----------1.00-----1.00--1.00-------1.001.00------1.00----1.001.00-----1.00-----------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGA........................................................................................20113.0013.002.00-----1.00--1.00----1.001.00-----2.00------1.00-----1.00-------1.00----------------------1.00----------1.00---------------------------------
...............................................................................................................................TTTTGGAAGGGAGGAGGCAG.........................................................................................20112.0012.003.00-5.00--1.00-------------1.001.00---1.00-------------------------------------------------------------------------------------
...............................................................................................................................TTTTGGAAGGGAGGAGGCAGA........................................................................................21110.0010.004.00--1.00---------------2.00-------------1.001.00------------1.00--------------------------------------------------------------
...............................................................................................................................TTTTGGAAGGGAGGAGGCAGAGT......................................................................................2318.005.006.00--1.00-----------------------------------------1.00----------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGAG.......................................................................................2117.007.00-1.00----2.00--1.00--1.00--------------------1.00---------------------------------------------------------1.00------------------
...............................................................................................................................TTTTGGAAGGGAGGAGGCAGAGA......................................................................................2316.006.00--3.001.00-----1.00------------------------------------------------1.00---------------------------------------------------
...............................................................................................................................TTTTGGAAGGGAGGAGGCAGAG.......................................................................................2215.005.001.00-------1.00--1.00-1.00-------------1.00----------------------------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGAGAT.....................................................................................2315.0023.00--------1.00----1.00----------------------------------------------1.00-----------------------------1.00------1.00------------
..............................................................................................................................GTTTTGGAAGGGAGGAGGCAGA........................................................................................2215.005.005.00-------------------------------------------------------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGAGT......................................................................................2215.007.00---1.00-----2.001.00--1.00------------------------------------------------------------------------------------------------
.................................................................................................................................TTGGAAGGGAGGAGGCAGAGA......................................................................................2113.003.00-----------------------------------------2.00-------1.00------------------------------------------------------------
....................................................................................................................................................................TCTGCTCCTTGTTTCCTTCCAGTT................................................2413.001.00------------2.00-------------------------------------------------------------1.00-----------------------------------
.................................................................................................................................TTGGAAGGGAGGAGGCAGAAAAG....................................................................................233.000.003.00-------------------------------------------------------------------------------------------------------------
..............................................................................................................................GTTTTGGAAGGGAGGAGGCAGAGT......................................................................................2413.002.001.00-------------------------------------2.00-----------------------------------------------------------------------
..............................................................................................................................................................................................CGTCCAGGAGCTGAGGAAGCGGGGTT....................2613.003.00-----3.00--------------------------------------------------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAG.........................................................................................1913.003.00---1.00-------------1.001.00-------------------------------------------------------------------------------------------
........TGAAGAAGGAATTGCAGAA.................................................................................................................................................................................................................1913.003.00----3.00---------------------------------------------------------------------------------------------------------
...............................................................................................................................TTTTGGAAGGGAGGAGGCAA.........................................................................................202.000.00-----------------------------------------------------------------------------1.00-------------------------1.00------
................................................................................................................................TTTGGAAGGGAGGAGGCAGAAAAT....................................................................................2412.0013.00---------------------------------------2.00----------------------------------------------------------------------
..........................................................................................................................................................................................................GAGGAAGCGGGGTTCTCC................1812.002.00-------2.00------------------------------------------------------------------------------------------------------
..............AGGAATTGCAGAAAGTGAA...........................................................................................................................................................................................................1912.002.00-----------------------------1.00---------------------------------1.00----------------------------------------------
........TGAAGAAGGAATTGCAGAAAGTG.............................................................................................................................................................................................................2312.002.00-2.00------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................AGGAGCTGAGGAAGCGGGGTTCTCCC...............2612.002.00-2.00------------------------------------------------------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGAA.......................................................................................2112.0013.00------------------1.00---------------------------------------------------------------1.00---------------------------
.............AAGGAATTGCAGAAAGTGAAAGAG.......................................................................................................................................................................................................2412.002.002.00-------------------------------------------------------------------------------------------------------------
.......GTGAAGAAGGAATTGCAGAAAGTGAAAG.........................................................................................................................................................................................................2812.002.00--------------2.00-----------------------------------------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGAAA......................................................................................2212.0013.00----------------------2.00---------------------------------------------------------------------------------------
......GGTGAAGAAGGAATTGCAGAA.................................................................................................................................................................................................................2112.002.00----2.00---------------------------------------------------------------------------------------------------------
.............AAGGAATTGCAGAAAGTGAAAGAGG......................................................................................................................................................................................................2512.002.00------------------------------2.00-------------------------------------------------------------------------------
.................................................................................................................................TTGGAAGGGAGGAGGCAG.........................................................................................1812.002.00------------------------------------------------------1.00---------------------------------------1.00---------------
..................................................................................................................................................................CCTCTGCTCCTTGTTTCCTTCCA...................................................2312.002.00-----------------2.00--------------------------------------------------------------------------------------------
..................................................................................................................................TGGAAGGGAGGAGGCAGAGACTCA..................................................................................242.000.00-------------------------2.00------------------------------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGTAAA.....................................................................................2312.003.00--------2.00-----------------------------------------------------------------------------------------------------
..............................................................................................................................GTTTTGGAAGGGAGGAGGCAGAG.......................................................................................2312.002.00----------------------------------------2.00---------------------------------------------------------------------
..............................................................................................................................GTTTTGGAAGGGAGGAGGCAG.........................................................................................2112.002.00-----------------------------------2.00--------------------------------------------------------------------------
...AGAGGTGAAGAAGGAATTGCAGAA.................................................................................................................................................................................................................2411.001.00-------1.00------------------------------------------------------------------------------------------------------
.................................................................................................................................TTGGAAGGGAGGAGGCAGAGATAAA..................................................................................2511.003.00-----1.00--------------------------------------------------------------------------------------------------------
......GGTGAAGAAGGAATTGCAGAAAGTGAAAGAGG......................................................................................................................................................................................................3211.001.00-----------------------1.00--------------------------------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGAT.......................................................................................2111.0013.00-----------------------------------------------------------------------------------1.00--------------------------
.......GTGAAGAAGGAATTGCTATA.................................................................................................................................................................................................................201.000.00-------1.00------------------------------------------------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAAT........................................................................................201.000.001.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................GAAGGGAGGAGGCAGAAGGG....................................................................................201.000.00-----------------------------------------------------------------------------------------------1.00--------------
.................................................................................................................................TTGGAAGGGAGGAGGCAGAG.......................................................................................2011.001.00---1.00----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................AGCCTTCGTCCAGGAGCTGAGGAAGCGGGGC.....................311.000.00--------------------------------------------------------1.00-----------------------------------------------------
..............AGGAATTGCAGAAAGTGTT...........................................................................................................................................................................................................1911.001.00------------------------------------------------------------------1.00-------------------------------------------
...AGAGGTGAAGAAGGAATTGCAGAAAGTGAAAGAGG......................................................................................................................................................................................................3511.001.00-----------------------1.00--------------------------------------------------------------------------------------
.......................AGAAAGTGAAAGAGGAAATCATTGAAGCC........................................................................................................................................................................................291.000.00--------------------------------------------------------------------1.00-----------------------------------------
....................................................................................................................................................................TCTGCTCCTTGTTTCCTTCCAG..................................................2211.001.00----------------------------1.00---------------------------------------------------------------------------------
....................................................................................................................................................................TCTGCTCCTTGTTTCCTTCCAGT.................................................2311.001.00---------------------------------------------------------------------------------------------1.00----------------
...............................................................................................................................TTTTGGAAGGGAGGAGGCAGAA.......................................................................................2211.0010.00-------------1.00------------------------------------------------------------------------------------------------
..............AGGAATTGCAGAAAGTGAAAGAGGAAATCA................................................................................................................................................................................................3011.001.00---------------------------1.00----------------------------------------------------------------------------------
..........AAGAAGGAATTGCAGAAAGTG.............................................................................................................................................................................................................2111.001.00--------------------------------------------------------------1.00-----------------------------------------------
..................................................................................................................................................................CCTCTGCTCCTTGTTTCCTTCC....................................................2211.001.00------------------------------------------------------------------------------------------------1.00-------------
.....AGGTGAAGAAGGAATTGCAGA..................................................................................................................................................................................................................2111.001.00------------------------------------1.00-------------------------------------------------------------------------
......GGTGAAGAAGGAATTGCAGA..................................................................................................................................................................................................................2011.001.00--------1.00-----------------------------------------------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGAGAAAT...................................................................................2511.0023.00----------------1.00---------------------------------------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGAAT......................................................................................2211.0013.00--------------------------------1.00-----------------------------------------------------------------------------
..............................................................................................................................GTTTTGGAAGGGAGGAGGCAGAAT......................................................................................2411.005.001.00-------------------------------------------------------------------------------------------------------------
..............AGGAATTGCAGAAAGTGAAAGAGGA.....................................................................................................................................................................................................2511.001.00-------------------------------------------------------------------------------1.00------------------------------
.....AGGTGAAGAAGGAATTGCAGAAAGTG.............................................................................................................................................................................................................2611.001.00----------------------------------------------1.00---------------------------------------------------------------
..................................................................................................................................................................CCTCTGCTCCTTGTTTCCTTCCAG..................................................2411.001.00----------------------------------------------------------------------------------------1.00---------------------
.....AGGTGAAGAAGGAATTGCAGAAAG...............................................................................................................................................................................................................2411.001.00-----------1.00--------------------------------------------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGAGAAT....................................................................................2411.0023.00-----------------------------------------------------------------------------------------1.00--------------------
..............................................................................................................................GTTTTGGAAGGGAGGAGGCAGT........................................................................................2211.002.00----------------1.00---------------------------------------------------------------------------------------------
..............................................................GCTTTGGTTTTGTTCTGGT...........................................................................................................................................................191.000.00----------------------------------------------------------------------------------------------------1.00---------
...AGAGGTGAAGAAGGAATTGCA....................................................................................................................................................................................................................2111.001.00---------------------------------------------------------------------------1.00----------------------------------
..............AGGAATTGCAGAAAGTGAAA..........................................................................................................................................................................................................2011.001.00----------------1.00---------------------------------------------------------------------------------------------
..........AAGAAGGAATTGCAGAAAGTGAAAGAGG......................................................................................................................................................................................................2811.001.00-----------------------1.00--------------------------------------------------------------------------------------
............GAAGGAATTGCAGAAAGTGAAAGAGGA.....................................................................................................................................................................................................2711.001.00------------------------------------1.00-------------------------------------------------------------------------
............................................................................................................................................................................................TTCGTCCAGGAGCTGAGGA.............................1911.001.00--------------------------------------------------1.00-----------------------------------------------------------
.................AATTGCAGAAAGTGAAAGAGGAT....................................................................................................................................................................................................2311.001.00-----------------------------------------------------------------------1.00--------------------------------------
...........................................................TTTGCTTTGGTTTTGTCG...............................................................................................................................................................181.000.00-------------------------------------1.00------------------------------------------------------------------------
...................................................................................................................................GGAAGGGAGGAGGCAGAGA......................................................................................1921.001.001.00-------------------------------------------------------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGAAAA.....................................................................................2311.0013.00-1.00------------------------------------------------------------------------------------------------------------
...............................................................................................................................TTTTGGAAGGGAGGAGGCAGAGACT....................................................................................2511.001.00-----1.00--------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GAGGAAGCGGGGTTCTCCCT..............2011.001.00-1.00------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TCTGCTCCTTGTTTCCTTCCAGC.................................................2311.001.00----------1.00---------------------------------------------------------------------------------------------------
........................GAAAGTGAAAGAGGAAATA.................................................................................................................................................................................................191.000.00-1.00------------------------------------------------------------------------------------------------------------
.................................................................................................................................TTGGAAGGGAGGAGGCAGAGACTCCG.................................................................................261.000.00---------------------------------------------------------------------------------------------------1.00----------
................................................................................................................................TTTGGAAGGGAGGAGGC...........................................................................................1711.001.00----------1.00---------------------------------------------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGT........................................................................................2011.003.00---------------1.00----------------------------------------------------------------------------------------------
......................................................................................TACTTATTTTGGAGGCATCATGTCCCTGGGCAAGAGCCCTGTTTTGGAAGGGAGGAGGCAGAGACTCTGCCCCTGACCTCTGCTCCTTGTTTCCTTCC....................................................9811.001.00--------------------------------------------------------------------------------------------------1.00-----------
..................................................................................................................................................................CCTCTGCTCCTTGTTTCCTTCCAGTAT...............................................2711.001.00-----------------------------1.00--------------------------------------------------------------------------------
...............................................................................................................................TTTTGGAAGGGAGGAGGCTG.........................................................................................201.000.001.00-------------------------------------------------------------------------------------------------------------
...............................................................................AAACATTTACTTATTTTTCTT........................................................................................................................................211.000.00-------------------------------------1.00------------------------------------------------------------------------
....GAGGTGAAGAAGGAATTG......................................................................................................................................................................................................................1821.001.00----------------------1.00---------------------------------------------------------------------------------------
...................................................................................................................................................................................................AGGAGCTGAGGAAGCGGGGTTCTCC................2511.001.00-1.00------------------------------------------------------------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGAGTT.....................................................................................2311.007.00---1.00----------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................TTCGTCCAGGAGCTGAGGAAGCGGG.......................2511.001.00------------------------------------------1.00-------------------------------------------------------------------
.........................................................................................................ATGTCCCTGGGCAAGGATT................................................................................................................191.000.00----------------------------------------------------1.00---------------------------------------------------------
.....................................................................................................................................................................................................GAGCTGAGGAAGCGGGGT.....................1811.001.00------------------------------------------------------------------------------------1.00-------------------------
..............................................................................................................................................................................................CGTCCAGGAGCTGAGGAAGCGGGGT.....................2511.001.00--------------1.00-----------------------------------------------------------------------------------------------
..............AGGAATTGCAGAAAGTG.............................................................................................................................................................................................................1711.001.00------1.00-------------------------------------------------------------------------------------------------------
...........AGAAGGAATTGCAGAAAGT..............................................................................................................................................................................................................1911.001.00-------------------------------------------1.00------------------------------------------------------------------
.................................................................................................................................TTGGAAGGGAGGAGGCAGAGACTCTGCCC..............................................................................2911.001.00------------------------------------------------------------------------------------------------------1.00-------
......................................................................................................................................................................TGCTCCTTGTTTCCTTCCAGTA................................................221.000.00-----------------------------------------------------------1.00--------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGTTTA.....................................................................................2311.003.00-1.00------------------------------------------------------------------------------------------------------------
...............................................................................................................................TTTTGGAAGGGAGGAGGCAGAGAAG....................................................................................2511.006.00------------------------------------------------1.00-------------------------------------------------------------
...................................................TGAGGTGGTTTGCTTTGGG......................................................................................................................................................................191.000.00------------1.00-------------------------------------------------------------------------------------------------
..AAGAGGTGAAGAAGGAATTGCAG...................................................................................................................................................................................................................2311.001.00--------------------------1.00-----------------------------------------------------------------------------------
......................................................................................................................................................................TGCTCCTTGTTTCCTTCCAGA.................................................211.000.00-----------------------------------------------------1.00--------------------------------------------------------
....................................................................................................................................................................TCTGCTCCTTGTTTCCTTC.....................................................1911.001.00----------------------------------------------------------------------1.00---------------------------------------
...................................................................................................................................................................................................AGGAGCTGAGGAAGCGGGGTTCTC.................2411.001.00-------1.00------------------------------------------------------------------------------------------------------
.................................................................................................................................TTGGAAGGGAGGAGGCAGAGAC.....................................................................................2211.001.00---------------------------------------------------------------------------------------1.00----------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGTTAT.....................................................................................2311.003.001.00-------------------------------------------------------------------------------------------------------------
..............AGGAATTGCAGAAAGTGAAAGAGGAA....................................................................................................................................................................................................2611.001.00-----------1.00--------------------------------------------------------------------------------------------------
...............................................................................................................................TTTTGGAAGGGAGGAGGCAGAAA......................................................................................2311.0010.00--------------------------------------------1.00-----------------------------------------------------------------
.................AATTGCAGAAAGTGAAAGAGGA.....................................................................................................................................................................................................2211.001.00---------------------------------------------------------------------1.00----------------------------------------
..............AGGAATTGCAGAAAGTTT............................................................................................................................................................................................................181.000.00-------------------------------------------1.00------------------------------------------------------------------
.............AAGGAATTGCAGAAAGTG.............................................................................................................................................................................................................1811.001.00----1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................TGGAAGGGAGGAGGCAGAGACT....................................................................................2211.001.00---1.00----------------------------------------------------------------------------------------------------------
...............................................................................................................................TTTTGGAAGGGAGGAGGCAGT........................................................................................2111.0012.00-------------------------------------------------------------------1.00------------------------------------------
....GAGGTGAAGAAGGAATTGCAGAAAGT..............................................................................................................................................................................................................2611.001.00-----------1.00--------------------------------------------------------------------------------------------------
...............................................................................................................................TTTTGGAAGGGAGGAGGCAGAGAAGTT..................................................................................2711.006.00--------------------------------1.00-----------------------------------------------------------------------------
...................................................................................................................................................................................................AGGAGCTGAGGAAGCGGGGTT....................2111.001.00---------------------------------------------------1.00----------------------------------------------------------
................................................................................................................................TTTGGAAGGGAGGAGGCAGAGATA....................................................................................2411.0023.001.00-------------------------------------------------------------------------------------------------------------
..............................GAAAGAGGAAATCATTG.............................................................................................................................................................................................1720.500.50---------------------------------------------------------------------------------------------------------0.50----
.................................................................................................................................TTGGAAGGGAGGAGGC...........................................................................................1630.330.33-------------------------------------------------------------------------------------------------------------0.33
.........GAAGAAGGAATTGCAGA..................................................................................................................................................................................................................1730.330.33---------------------------------------------0.33----------------------------------------------------------------
................................AAGAGGAAATCATTGAAG..........................................................................................................................................................................................1830.330.33-----------------------------------------------------------------------------------------------------------0.33--
.................................AGAGGAAATCATTGAAG..........................................................................................................................................................................................1730.330.33----------------------------------------------------------------------------------------------------------0.33---
.....AGGTGAAGAAGGAATTGC.....................................................................................................................................................................................................................1830.330.33----------------------------------------------0.33---------------------------------------------------------------
..................................................................................................................................TGGAAGGGAGGAGGCAG.........................................................................................1770.290.29------------------------0.29-------------------------------------------------------------------------------------
..................................GAGGAAATCATTGAAG..........................................................................................................................................................................................1680.120.12-----------------------------------------------0.12--------------------------------------------------------------

Antisense strand
GGAAGAGGTGAAGAAGGAATTGCAGAAAGTGAAAGAGGAAATCATTGAAGGTGAGGTGGTTTGCTTTGGTTTTGTTCTTAAACATTTACTTATTTTGGAGGCATCATGTCCCTGGGCAAGAGCCCTGTTTTGGAAGGGAGGAGGCAGAGACTCTGCCCCTGACCTCTGCTCCTTGTTTCCTTCCAGCCTTCGTCCAGGAGCTGAGGAAGCGGGGTTCTCCCTGACCACAGGGACCC
.................................................................................................................................(((((((((((((.((((((..((.......)).)))))))))))....))))))))..................................................
...........................................................................................................................124.................................................................192..........................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR029127(GSM416756)
A549. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189786GSM416733(GSM416733)
HEK293. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040021(GSM532906)
G761T_2. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		TAX577453(Rovira)
total RNA. (breast)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR189784SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR189782SRR038855(GSM458538)
D10. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR037931(GSM510469)
293GFP. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR189787SRR040035(GSM532920)
G001T. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)		GSM532887(GSM532887)
G761N. (cervix)		SRR029129(GSM416758)
SW480. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
.........................AAAGTGAAAGAGGAAATTTTG.............................................................................................................................................................................................. 211.000.00------------------------------------------------------------------------------1.00-------------------------------
.................................................................................................................................TTGGAAGGGAGGAGGGCCC........................................................................................ 191.000.00---------------------------------------------------------1.00----------------------------------------------------
.............................................................................TTAAACATTTACTTACAG............................................................................................................................................. 181.000.00---------------------------------------------------------------------------------1.00----------------------------
......................................................................................................................................................................TGCTCCTTGTTTCCTTTT.................................................... 181.000.00----1.00---------------------------------------------------------------------------------------------------------
...............................................................................................................................TTTTGGAAGGGAGGATGGC.......................................................................................... 191.000.00-----------------------------------------------------------------------------------------------------1.00--------
.............................................TGAAGGTGAGGTGGTT............................................................................................................................................................................... 1630.330.33------------------------------------------------------------------------------------------------------------0.33-
........................................................................................................................................................................................AGCCTTCGTCCAG....................................... 13100.100.10------------------------------------------------0.10-------------------------------------------------------------