ID: uc002ozy.0
GENE: TOMM40
chr19:45394522-45394713+


(3)
AGO2.ip 		(6)
B-CELL 		(5)
BRAIN 		(9)
BREAST 		(37)
CELL-LINE 		(7)
CERVIX 		(8)
HELA 		(3)
LIVER 		(1)
OTHER 		(14)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
GGCGCACGGGGTGGGAGCGGAGCCCAGGCCGGGAGCAGGCGCCGCCGCCAGTGAGAACCGGGGCCGGAGCCGGGTGCGGATTTGCTGGGGCTGAGTCGGGGGCGCGCGGGCCCTGACCTCTGCCCTCTGACCTCTCCCCTAGCAGGCGACCATGGGGAACGTGTTGGCTGCCAGCTCGCCGCCCGCAGGGCC
....................................................................................((((((..((((((((((.(((.(((......))).))))))))))).))..))))))..................................................
..........................................................................75.................................................................142................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		GSM532880(GSM532880)
G659T. (cervix)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR038863(GSM458546)
MM603. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Paz8D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		DRR001482(DRX001036)
Hela long total cell fraction, control. (hela)		SRR189784TAX577589(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR029124(GSM416753)
HeLa. (hela)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR040022(GSM532907)
G575N. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		GSM532876(GSM532876)
G547T. (cervix)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR343335SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR040036(GSM532921)
G243N. (cervix)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577580(Rovira)
total RNA. (breast)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR040010(GSM532895)
G529N. (cervix)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
.......................................................................................................................CTGCCCTCTGACCTCTCCCCTAG..................................................23110.0010.00---6.00--1.00---------------------------------------------1.00--------------1.00----------1.00---------------
..................................................GTGAGAACCGGGGCCGGAGCCGGGTGCGGATTTGCTGGGGCTGAGTCGGGGGCGCGCGGGCCCTGACCTCTGCCCTCTGACCTCTCCCCTAG..................................................9218.008.00--8.00-------------------------------------------------------------------------------------------
..........................................................................................................................CCCTCTGACCTCTCCCCTAGCAG...............................................2317.007.00-2.00-----------1.00----------------1.00-------------------------------------------1.00----1.001.00-------------
...............................................................................ATTTGCTGGGGCTGAGTCGG.............................................................................................2016.006.00-6.00--------------------------------------------------------------------------------------------
........................CAGGCCGGGAGCAGGCGCCGCCG.................................................................................................................................................2315.005.004.00-------------1.00-------------------------------------------------------------------------------
...............................................................................ATTTGCTGGGGCTGAGTCGGGGG..........................................................................................2315.005.004.00------------------------------------------------1.00--------------------------------------------
.......................................................................................................................CTGCCCTCTGACCTCTCCCCTAGT.................................................2415.0010.00------------2.00---1.00----------------------1.00----------------------1.00-------------------------------
...........................................................................................................................CCTCTGACCTCTCCCCTAGCAGT..............................................2314.003.00----3.00--------------------------------1.00--------------------------------------------------------
...........................................................................................................................CCTCTGACCTCTCCCCTAGCAG...............................................2213.003.00-----------------------1.00-------------------------------------1.00----------1.00---------------------
..............................................GCCAGTGAGAACCGGGGC................................................................................................................................1813.003.00-------3.00--------------------------------------------------------------------------------------
................................................................................TTTGCTGGGGCTGAGTCGGGGG..........................................................................................2213.003.003.00---------------------------------------------------------------------------------------------
..................................................GTGAGAACCGGGGCCGGAGC..........................................................................................................................2013.003.00-1.00---2.00----------------------------------------------------------------------------------------
.......................................................................................................................CTGCCCTCTGACCTCTCCCCTAT..................................................2312.001.002.00---------------------------------------------------------------------------------------------
..................................................................................TGCTGGGGCTGAGTCGGGGGC.........................................................................................2112.002.00----2.00-----------------------------------------------------------------------------------------
...................................................................................GCTGGGGCTGAGTCGGGGGC.........................................................................................2012.002.00-----2.00----------------------------------------------------------------------------------------
.................................................................................TTGCTGGGGCTGAGTCGG.............................................................................................1812.002.00---------------2.00------------------------------------------------------------------------------
.................................................................................TTGCTGGGGCTGAGTCGGAGA..........................................................................................2112.002.00--------2.00-------------------------------------------------------------------------------------
.....ACGGGGTGGGAGCGGAGCC........................................................................................................................................................................1921.501.50-----------------1.00---------------------------------------------------------------------0.50------
..........................................................CGGGGCCGGAGCCGGGT.....................................................................................................................1721.501.50----------1.50-----------------------------------------------------------------------------------
..................................................GTGAGAACCGGGGC................................................................................................................................1431.331.33---------------------------------------------------------------------------------0.67------0.330.33----
..........................................................................................................................CCCTCTGACCTCTCCCCTAGCCG...............................................231.000.00---------------------------------------------------------------1.00------------------------------
...............AGCGGAGCCCAGGCCGGGAGCAGGCGC......................................................................................................................................................2721.001.00--------------------------------------------------------1.00-------------------------------------
.............................CGGGAGCAGGCGCCGCCG.................................................................................................................................................1811.001.00-------------------------------1.00--------------------------------------------------------------
..........................................................................................................................................................GGGAACGTGTTGGCTATTA...................191.000.00----------------------------------------------------------------------1.00-----------------------
..........................................................................................................................................................GGGAACGTGTTGGCTAAA....................181.000.00--------------------------1.00-------------------------------------------------------------------
................................................................................................................................................GGCGACCATGGGGAACGTGTTGGC........................2411.001.00-----------------------------------1.00----------------------------------------------------------
........................CAGGCCGGGAGCAGGCGCCGC...................................................................................................................................................2111.001.00-------------------------------------------1.00--------------------------------------------------
...................................................TGAGAACCGGGGCCGGAGCC.........................................................................................................................2011.001.00-------------------1.00--------------------------------------------------------------------------
......................................................................................................................................................CATGGGGAACGTGTTGGCTGCCA...................2311.001.00--------------------------------------1.00-------------------------------------------------------
........................................................................................................................TGCCCTCTGACCTCTCCCCTAG..................................................2211.001.00----------------------------------------------1.00-----------------------------------------------
...................................................................................................GGGCGCGCGGGCCCTGGC...........................................................................181.000.00------------------1.00---------------------------------------------------------------------------
...........................................................................................................................CCTCTGACCTCTCCCCTAG..................................................1911.001.00---1.00------------------------------------------------------------------------------------------
..................................................................GAGCCGGGTGCGGATTTGCT..........................................................................................................2011.001.00----------------------------------------------------------------------------1.00-----------------
.........................................................................GTGCGGATTTGCTGGGGCTGA..................................................................................................2111.001.00-----1.00----------------------------------------------------------------------------------------
..................................................GTGAGAACCGGGGCCGGAGCCGGGTGCGGATTTGCTGGGGCTGAGTCGGGGGCGCGCGGGCCCTGACCTCTGCCCTCTGACCTCTCCCCTATAA................................................941.000.00--1.00-------------------------------------------------------------------------------------------
................................................CAGTGAGAACCGGGGCCGGAGCCGG.......................................................................................................................2511.001.00-------------------1.00--------------------------------------------------------------------------
.......................................................................................................................CTGCCCTCTGACCTCTCCCCTTTA.................................................241.000.00---1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................GCTGCCAGCTCGCCGCCCG.......1911.001.00-----------------------------------------------------------------1.00----------------------------
..................................................GTGAGAACCGGGGCCGGT............................................................................................................................181.000.00-----1.00----------------------------------------------------------------------------------------
..................................................GTGAGAACCGGGGCCGGAGCCGGGTGCGGATTTGCTGGGGCTGAGTCGGGGGCGCGCGGGCCCTGACCTCTGCCCTCTGACCTCTCCCCTAGA.................................................9311.008.00-----------------------------------------1.00----------------------------------------------------
.....ACGGGGTGGGAGCGGTA..........................................................................................................................................................................171.000.00-----------------------------1.00----------------------------------------------------------------
..................................................................................TGCTGGGGCTGAGTCGGGGGCGCGCG....................................................................................2611.001.00------------------------------------------------------------------1.00---------------------------
..............................................................................................................................CTGACCTCTCCCCTAGAA................................................181.000.00-----------------------------------------------------1.00----------------------------------------
...............................................................................................................................................................CGTGTTGGCTGCCAGCTCGC.............2011.001.00------------------------------------1.00---------------------------------------------------------
....................................................................................CTGGGGCTGAGTCGGGGGCGCG......................................................................................2211.001.00---------------------------------------------------------------------------1.00------------------
..................................................................GAGCCGGGTGCGGATTT.............................................................................................................1711.001.00----------------------------------------------------------------1.00-----------------------------
..........................................................................................................................CCCTCTGACCTCTCCCCTATCAT...............................................231.000.00---------------------------------------------------------1.00------------------------------------
.......................................................................................................................CTGCCCTCTGACCTCTCCCCTAGTT................................................2511.0010.00----1.00-----------------------------------------------------------------------------------------
........................................................ACCGGGGCCGGAGCCGGGGA....................................................................................................................201.000.00------1.00---------------------------------------------------------------------------------------
........................................GCCGCCGCCAGTGAGAACCGGGGCCGGAGCCGG.......................................................................................................................3311.001.00---------1.00------------------------------------------------------------------------------------
......................CCCAGGCCGGGAGCAGGCGCCG....................................................................................................................................................2211.001.00--------------1.00-------------------------------------------------------------------------------
..............................GGGAGCAGGCGCCGCCATGG..............................................................................................................................................201.000.00-----------------------------------------------------------------------------1.00----------------
........................................................ACCGGGGCCGGAGCCGGGTGCGGATTTG............................................................................................................2811.001.00----------------------------------------1.00-----------------------------------------------------
...........................................GCCGCCAGTGAGAACCGG...................................................................................................................................1811.001.00----------------------------1.00-----------------------------------------------------------------
..........................................................................................................................................................GGGAACGTGTTGGCTGCCAGCTCG..............2411.001.00----------------------------------------------------------1.00-----------------------------------
..............................................................................GATTTGCTGGGGCTGAGTCGGG............................................................................................2211.001.00--------------------------------1.00-------------------------------------------------------------
.......................................................AACCGGGGCCGGAGCCGGGTGCGGA................................................................................................................2511.001.00---------------------------------------------1.00------------------------------------------------
.............................................................................................................................................................AACGTGTTGGCTGCCAGCT................1911.001.00---------------------------------------------------1.00------------------------------------------
....................................................................................................................CCTCTGCCCTCTGACCTCTCCCCTAGCAG...............................................2911.001.00---------------------------------1.00------------------------------------------------------------
.............................CGGGAGCAGGCGCCGCC..................................................................................................................................................1711.001.00----------1.00-----------------------------------------------------------------------------------
..........................................................................................................................................................GGGAACGTGTTGGCTGCCAGC.................2111.001.00-1.00--------------------------------------------------------------------------------------------
.........................AGGCCGGGAGCAGGCGCCGCCGCCAGT............................................................................................................................................2711.001.00------------------------------------------------------------1.00---------------------------------
....................................AGGCGCCGCCGCCAGTGAGAACCGGGGCCGGAG...........................................................................................................................3311.001.00-------------------------------------------------------------------------1.00--------------------
........................................................................................................................TGCCCTCTGACCTCTCCCCTAGA.................................................2311.001.00-----------------------------------------------------------1.00----------------------------------
......................................................................CGGGTGCGGATTTGCTGGGG......................................................................................................2011.001.00-1.00--------------------------------------------------------------------------------------------
.......................................................................................................................CTGCCCTCTGACCTCTCCCCTA...................................................2211.001.00--------------------------------------------------------------------1.00-------------------------
.................................................................................TTGCTGGGGCTGAGTCGGGGAAA........................................................................................231.000.00-----------1.00----------------------------------------------------------------------------------
..................................................................................................................................................CGACCATGGGGAACGTGTTGGCTGCC....................2611.001.00-------------1.00--------------------------------------------------------------------------------
.......................................................................................................................CTGCCCTCTGACCTCTCCCCTAGA.................................................2411.0010.00----------------1.00-----------------------------------------------------------------------------
.GCGCACGGGGTGGGATTAC............................................................................................................................................................................191.000.00----------------------1.00-----------------------------------------------------------------------
...............................................................................................................................................AGGCGACCATGGGGAAC................................1711.001.00------------------1.00---------------------------------------------------------------------------
.......GGGGTGGGAGCGGAGCCCAGGCCGGGAGCAG..........................................................................................................................................................3121.001.00------------------------1.00---------------------------------------------------------------------
.GCGCACGGGGTGGGAGGC.............................................................................................................................................................................181.000.00--------------------------------------------1.00-------------------------------------------------
...........................GCCGGGAGCAGGCGCCGC...................................................................................................................................................1811.001.00--------------------1.00-------------------------------------------------------------------------
............................................................................CGGATTTGCTGGGGCTG...................................................................................................1711.001.00---------1.00------------------------------------------------------------------------------------
......................................................................CGGGTGCGGATTTGCTGG........................................................................................................1811.001.00-----------1.00----------------------------------------------------------------------------------
...........................................................................................................................CCTCTGACCTCTCCCCTAGCCGT..............................................231.000.00------------------------------------------------1.00---------------------------------------------
....................................................................................CTGGGGCTGAGTCGGGGGC.........................................................................................1911.001.00---------------------------------------------------------------------1.00------------------------
.................................................................................TTGCTGGGGCTGAGTCGGGAA..........................................................................................211.000.00----------------------------------1.00-----------------------------------------------------------
............................................................................CGGATTTGCTGGGGCTGAGTCGGG............................................................................................2411.001.00--------------------1.00-------------------------------------------------------------------------
.......................CCAGGCCGGGAGCAGGCGCCGCCGCAC..............................................................................................................................................271.000.00-----------------------------------------------------------------------1.00----------------------
..........................................................CGGGGCCGGAGCCGGCGG....................................................................................................................181.000.00-----------------------------------------------1.00----------------------------------------------
..................................................GTGAGAACCGGGGCCGGAGCCGGGTGCGGATTTGCTGGGGCTGAGTCGGGGGCGCGCGGGCCCTGACCTCTGCCCTCTGACCTCTCCCCTAGCAG...............................................9511.001.00------------------------------------------------------1.00---------------------------------------
.......................................................................................................................CTGCCCTCTGACCTCTCCCCTATA.................................................2411.001.00---1.00------------------------------------------------------------------------------------------
....................................................................................CTGGGGCTGAGTCGGGGGCGCGCGT...................................................................................251.000.00----1.00-----------------------------------------------------------------------------------------
...................................................................................GCTGGGGCTGAGTCGGGGGCGCGCGGGCCCTG.............................................................................3211.001.00-----------------1.00----------------------------------------------------------------------------
.............................................CGCCAGTGAGAACCGGGGC................................................................................................................................1911.001.00--------------------------------------------------1.00-------------------------------------------
..............................................GCCAGTGAGAACCGGGGCCGG.............................................................................................................................2111.001.00---------------------1.00------------------------------------------------------------------------
.........................................................................................................................................................GGGGAACGTGTTGGCTGC.....................1811.001.00-------------------------------------------------------1.00--------------------------------------
...GCACGGGGTGGGAGCGGAG..........................................................................................................................................................................1920.500.50----------------------------------------------------------------------------------0.50-----------
.....ACGGGGTGGGAGCGGAGCCCAGGCCGGGAGCAG..........................................................................................................................................................3320.500.50--------------------------------------------------------------------------------------0.50-------
......................CCCAGGCCGGGAGCAGGCGC......................................................................................................................................................2020.500.50-----------------------------------------------------------------------------------0.50----------
...GCACGGGGTGGGAGCGGAGC.........................................................................................................................................................................2020.500.50-----------0.50----------------------------------------------------------------------------------
.......GGGGTGGGAGCGGAGCCCAGG....................................................................................................................................................................2120.500.50---------------------0.50------------------------------------------------------------------------
.......................................................................................................................CTGCCCTCTGACCTCTCCCC.....................................................2020.500.50------------------------------------------------------------------------------------0.50---------
.....ACGGGGTGGGAGCGGAGCCCAGGCCG.................................................................................................................................................................2620.500.50-------------------------------------------------------------------------------------0.50--------
.........GGTGGGAGCGGAGCCCAGGCCGGGAGCAGGCGC......................................................................................................................................................3320.500.50---------0.50------------------------------------------------------------------------------------
......CGGGGTGGGAGCGGA...........................................................................................................................................................................1530.330.33------0.33---------------------------------------------------------------------------------------
...............................................................................................TCGGGGGCGCGCGGG..................................................................................1550.200.20------------------------------------------------------------------------------------------0.20---
.........................AGGCCGGGAGCAGGCGCC.....................................................................................................................................................1860.170.17-------------------------------------------------------------------------------------------0.17--

Antisense strand
GGCGCACGGGGTGGGAGCGGAGCCCAGGCCGGGAGCAGGCGCCGCCGCCAGTGAGAACCGGGGCCGGAGCCGGGTGCGGATTTGCTGGGGCTGAGTCGGGGGCGCGCGGGCCCTGACCTCTGCCCTCTGACCTCTCCCCTAGCAGGCGACCATGGGGAACGTGTTGGCTGCCAGCTCGCCGCCCGCAGGGCC
....................................................................................((((((..((((((((((.(((.(((......))).))))))))))).))..))))))..................................................
..........................................................................75.................................................................142................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		GSM532880(GSM532880)
G659T. (cervix)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR038863(GSM458546)
MM603. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Paz8D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		DRR001482(DRX001036)
Hela long total cell fraction, control. (hela)		SRR189784TAX577589(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR029124(GSM416753)
HeLa. (hela)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR040022(GSM532907)
G575N. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		GSM532876(GSM532876)
G547T. (cervix)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR343335SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR040036(GSM532921)
G243N. (cervix)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577580(Rovira)
total RNA. (breast)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR040010(GSM532895)
G529N. (cervix)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................................................................GACCTCTGCCCTCTGACTGT.......................................................... 201.000.00---------------------------1.00------------------------------------------------------------------
........................................................ACCGGGGCCGGAGCCGGGGGA................................................................................................................... 211.000.00------1.00---------------------------------------------------------------------------------------
..................GGAGCCCAGGCCGGGACG............................................................................................................................................................ 181.000.00------------------------------------------1.00---------------------------------------------------
................GCGGAGCCCAGGCCGGGTC............................................................................................................................................................. 191.000.00--------1.00-------------------------------------------------------------------------------------
..............................................................................................................CCCTGACCTCTGCCCTCTGACCTCTCCCCT.................................................... 3011.001.00-------------------------1.00--------------------------------------------------------------------
.GCGCACGGGGTGGG................................................................................................................................................................................. 1490.110.11--------------------------------------------------------------------------------------------0.11-
................................................................................................................CTGACCTCTGCCCTCTG............................................................... 17100.100.10---------------------------------------------------------------------------------------------0.10