ID: uc002olt.1
GENE: TIMM50(5)
chr19:39976398-39976876+


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(2)
AGO3.ip 		(5)
B-CELL 		(5)
BRAIN 		(4)
BREAST 		(26)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(6)
HEART 		(4)
HELA 		(6)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(15)
SKIN 		(1)
XRN.ip

Sense strand
ACACGCTCGTTTTGGAGCTCACCGGCGTCCTCTTGCATCCTGAGTGGTCGGTGTGTCCCGGGAAACCCAGTGGGTTGGGGATAGACCTGGGCAGTGGGGTTGTGATGAGGTGGACTTTCAGCCCTGGCTGTGCTATGTGATCTTGGGGAGGAGATGTCACCTGTCATTGCCTCGCTTTCTTCAGCTGGGAGAAGGCAGTCATGCTAACACCCACTCTGTAGGGTAGTGTAGGTGTGCCCAGGCACGCTATAAGTGCCACAAAGGAGCCAGACCCGCAGTCACAGCCTATGAACTTCTTGACCTCCAAGAGCCACAGAGACAGAGGGAGAGAACTCTGTTCTGGGAATCCCCCAGGCTGGATCTTTGTCCTCTTGGGGACTCTGAGGACCTCTGGGTCTTGGTGTTTCACTGTCCTCACTGTCTTCCCAGCTGGCCACTGGCTGGAGGTTTAAGAAGCGCCCAGGCATCGAGACCTTGTT
....................................................................................................................................................................................................................................................................................................................................................................................(((((((..(((((((...((((.........))))..)))))))..)))..))))...................................................
..............................................................................................................................................................................................................................................................................................................................................................................367...........................................................429................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189786SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR189784SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189787SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR040025(GSM532910)
G613T. (cervix)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR038859(GSM458542)
MM386. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040015(GSM532900)
G623T. (cervix)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR040031(GSM532916)
G013T. (cervix)		SRR191527(GSM715637)
128genomic small RNA (size selected RNA from . (breast)		SRR038853(GSM458536)
MELB. (cell line)		SRR343334SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189785SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......................................................................................................................................................................................................................................................................................................................................................................................................................CACTGTCCTCACTGTCTTCCCAGT.................................................2411.000.00-7.00---1.00----2.00-------------1.00-----------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACCTCT.......................................................................................2118.008.00-----1.00--1.00---1.001.00-----------------1.00------------------------------1.00------------1.00-1.00------
..................................................................................................................................................................................................................................................................................................................................................................................CTTGGGGACTCTGAGGACCTCT.......................................................................................2215.005.00--1.00------------1.00--------------------1.00-----------------1.00----------------1.00------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACCTCTG......................................................................................2215.005.00----2.00----------------------1.00--------------------1.00-----------1.00-----------------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACCTCTGT.....................................................................................2315.005.00--------------1.00---1.00----------1.00---------------------1.00-------1.00------------------------
..................................................................................................................................................................................................................................................................................................................................................................................CTTGGGGACTCTGAGGACCTCTG......................................................................................2315.005.00--2.001.00-------1.00-----------------------------1.00------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................CTTGGGGACTCTGAGGACCTC........................................................................................2114.004.00----2.00---2.00---------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACCTCTGA.....................................................................................2314.005.00---------1.00-1.00------1.00------------------1.00----------------------------------------------
................................................................................................................................................................................................................................................................................................................................AGAGGGAGAGAACTCGGTC............................................................................................................................................193.000.00------1.00-------------------------------1.00--------------1.00------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACCTCTGGGCC..................................................................................2613.001.00---3.00--------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................ACAAAGGAGCCAGACCGTC...........................................................................................................................................................................................................193.000.003.00-----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACCTC........................................................................................2013.003.00-----------------------------------------------------------------1.00---1.00---1.00----------
.................................................................................................................................................................................................................................................................................................................................GAGGGAGAGAACTCTG..............................................................................................................................................1652.402.40-------0.20---0.20---------0.200.200.80------------------------------------------------------0.20-0.40--0.20
........GTTTTGGAGCTCACCGGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002.00--1.00----------1.00----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................ACAGAGACAGAGGGAGCTTA...................................................................................................................................................202.000.00------2.00-----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTCCTCACTGTCTTCCCAGT.................................................232.000.00-------------------2.00----------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................CTTGGGGACTCTGAGGACCT.........................................................................................2012.002.00----------------------------------1.00----------------------------1.00--------------------
.............GGAGCTCACCGGCGTCCTCTTGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002.00-------1.00------------------------------------------1.00---------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................TCTTGGGGACTCTGAGGACT..........................................................................................201.000.00---------1.00--------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGCCACTGGCTGGGAG................................191.000.00------------1.00-----------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACCTCAA......................................................................................2211.003.00----1.00-------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................CTTGGGGACTCTGAGGACC..........................................................................................1911.001.00--1.00---------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGGTTTAAGAAGGCT....................191.000.00---------------------------------------------1.00--------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................CTTGGGGACTCTGAGGACCTCTGA.....................................................................................2411.005.00--1.00---------------------------------------------------------------------------------
.................................................................................TAGACCTGGGCAGTGGTT............................................................................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------1.00----------------------------------------------------------
.....................................TCCTGAGTGGTCGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................161.000.00-------------------------------------------------------------1.00----------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGCGCCCAGGCATCGAGACCTTGT.2811.001.00----------------------1.00-------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................CTTGGGGACTCTGAGGACCTCAT......................................................................................2311.004.00--------------------------1.00---------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................TGGGGACTCTGAGGACCTCTGAT....................................................................................231.000.00----------------------------------------------------------------------------1.00-------
...................CACCGGCGTCCTCTTGCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------1.00----------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACCTCTGGG....................................................................................2411.001.00----------1.00-------------------------------------------------------------------------
.....................................TCCTGAGTGGTCGGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1611.001.00--------------------------------------------1.00---------------------------------------
.......................................................................................TGGGCAGTGGGGTTGTGTTG....................................................................................................................................................................................................................................................................................................................................................................................201.000.00-----------------------------------------------1.00------------------------------------
....................ACCGGCGTCCTCTTGCATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00---1.00--------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................AGAGGGAGAGAACTCGC..............................................................................................................................................171.000.00-------------------------------------------------1.00----------------------------------
................................................................................................................................................................................................................................................................................................................................AGAGGGAGAGAACTCGGT.............................................................................................................................................181.000.00----------------------------1.00-------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCGCCCAGGCATCGAGACCTTGTCCC301.000.001.00-----------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................TGGTGTTTCACTGTCCTCACTGTCTA.......................................................261.000.00----------------------------------------------------------------1.00-------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................CACTGTCCTCACTGTCTTCCCAGCTGG..............................................2711.001.00------1.00-----------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCCTCACTGTCTTCCCAG..................................................2111.001.00-----1.00------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCCCAGGCATCGAAA.......181.000.00----------------1.00-------------------------------------------------------------------
............TGGAGCTCACCGGCGTCCTCTTGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00---------------------------------1.00--------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGGAGGTTTAAGAA........................1811.001.00----------------------------------------1.00-------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACCTT........................................................................................201.000.00----------------------------------------------1.00-------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAAGCGCCCAGGCATCGAGACCC....261.000.001.00-----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACCTCTGCT....................................................................................2411.005.00---------------------------------------1.00--------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CAGAGGGAGAGAACTCTG..............................................................................................................................................1811.001.00--------------------------------------------------------------------1.00---------------
........................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCCTCACTGTCTTCCCAGTT................................................2311.001.00---------------1.00--------------------------------------------------------------------
.........TTTTGGAGCTCACCGGCGTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------1.00----------------------------------------------------------------------------
........GTTTTGGAGCTCACCGGCGTCCTCTTGCATCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................3211.001.00------------------------------------------1.00-----------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................CTTGGGGACTCTGAGGAC...........................................................................................1811.001.00--------------------------------1.00---------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................CTTGGGGACTCTGAGGACAAA........................................................................................2111.001.00----------------------------------------------------1.00-------------------------------
............................................................................................................................................................................................................................................................................AGACCCGCAGTCACAGCCTAT..............................................................................................................................................................................................2111.001.00-----------------1.00------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGCTGGAGGTTTAAGAAGCGCC...................2511.001.00------------------------------------------------------------------1.00-----------------
........GTTTTGGAGCTCACCGGCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-----------------1.00------------------------------------------------------------------
.......................................................................................................................................................................................................................CTGTAGGGTAGTGTAGGG......................................................................................................................................................................................................................................................181.000.00-------------------------------------------1.00----------------------------------------
...........................................................................................................AGGTGGACTTTCAGCGCGA.................................................................................................................................................................................................................................................................................................................................................................191.000.00-------------------------------------------------------------------1.00----------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACCTCTGG.....................................................................................2311.001.00------------------------------------------------------------------------1.00-----------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACC..........................................................................................1821.001.00--0.50-0.50-------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................ACAGAGACAGAGGGAGACCTG..................................................................................................................................................211.000.001.00-----------------------------------------------------------------------------------
...........TTGGAGCTCACCGGCGTCCTCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00---------1.00--------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACAT.........................................................................................191.000.00-----------------------------------1.00------------------------------------------------
..................................................................................AGACCTGGGCAGTGGGGGGC.........................................................................................................................................................................................................................................................................................................................................................................................201.000.001.00-----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACCTCTAGA....................................................................................2411.008.00----------------------------------------------------------------------1.00-------------
............................................................................................................................................................................................................................GGGTAGTGTAGGTGTGCCCAGGC............................................................................................................................................................................................................................................2311.001.00---------------------------------------------------------1.00--------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGGTTTAAGAAGCGCCCAGG...............2411.001.00--------------------------------------------------------------------------1.00---------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTGGCTGGAGGTTTAAGAAGCGCCC..................2811.001.00--------------1.00---------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................AGGCTGGATCTTTGTCCTC............................................................................................................1911.001.00---------------------1.00--------------------------------------------------------------
........................................................................................................ATGAGGTGGACTTTCTGA.....................................................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------------------------1.00----------------------------
...............................................................................................................................................TGGGGAGGAGATGTCACCTGTCT.........................................................................................................................................................................................................................................................................................................................231.000.00---1.00--------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACCTATGT.....................................................................................231.000.00-----1.00------------------------------------------------------------------------------
.........TTTTGGAGCTCACCGGCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-------1.00----------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGACCTCTGTAA...................................................................................2511.005.00-----1.00------------------------------------------------------------------------------
............TGGAGCTCACCGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.500.50--------------------0.50---------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................AGAGGGAGAGAACTCTG..............................................................................................................................................1720.500.50------------------------------------------------------------------------------0.50-----
....................................................................................................................................................................................................................................................................................................................................................................................TGGGGACTCTGAGGACC..........................................................................................1720.500.50-------------------------------------------------------------------------------0.50----
....................................................................................................................................................................................TCAGCTGGGAGAAGGC...........................................................................................................................................................................................................................................................................................1670.290.29-----------------------0.29------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGA............................................................................................1640.250.25---------------------------------------------------------------------------------0.25--
...................................................................................................................................................................................................................................................................................................................................................................................TTGGGGACTCTGAGGAAAG.........................................................................................1940.250.25------0.25-----------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................CTCTTGGGGACTCTGA...............................................................................................1650.200.20----------------------------------------------------------------------------------0.20-
.................................................................................................................................................................................................................................................................................................................................................................................TCTTGGGGACTCTGAG..............................................................................................1680.120.12---------------------------------------------------------------------------------0.12--

Antisense strand
ACACGCTCGTTTTGGAGCTCACCGGCGTCCTCTTGCATCCTGAGTGGTCGGTGTGTCCCGGGAAACCCAGTGGGTTGGGGATAGACCTGGGCAGTGGGGTTGTGATGAGGTGGACTTTCAGCCCTGGCTGTGCTATGTGATCTTGGGGAGGAGATGTCACCTGTCATTGCCTCGCTTTCTTCAGCTGGGAGAAGGCAGTCATGCTAACACCCACTCTGTAGGGTAGTGTAGGTGTGCCCAGGCACGCTATAAGTGCCACAAAGGAGCCAGACCCGCAGTCACAGCCTATGAACTTCTTGACCTCCAAGAGCCACAGAGACAGAGGGAGAGAACTCTGTTCTGGGAATCCCCCAGGCTGGATCTTTGTCCTCTTGGGGACTCTGAGGACCTCTGGGTCTTGGTGTTTCACTGTCCTCACTGTCTTCCCAGCTGGCCACTGGCTGGAGGTTTAAGAAGCGCCCAGGCATCGAGACCTTGTT
....................................................................................................................................................................................................................................................................................................................................................................................(((((((..(((((((...((((.........))))..)))))))..)))..))))...................................................
..............................................................................................................................................................................................................................................................................................................................................................................367...........................................................429................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189786SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR189784SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189787SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR040025(GSM532910)
G613T. (cervix)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR038859(GSM458542)
MM386. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040015(GSM532900)
G623T. (cervix)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR040031(GSM532916)
G013T. (cervix)		SRR191527(GSM715637)
128genomic small RNA (size selected RNA from . (breast)		SRR038853(GSM458536)
MELB. (cell line)		SRR343334SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189785SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................GCTCACCGGCGTCCTCTTGCATCCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................... 2611.001.00--------------------1.00---------------------------------------------------------------
......................................................................................................................................................................................................................................................................GGAGCCAGACCCGCAAAA....................................................................................................................................................................................................... 181.000.00----------------1.00-------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCCCAGCTGGCCC........................................... 171.000.00------------------------------1.00-----------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCCAGCTGGCCACTGATG..................................... 211.000.001.00-----------------------------------------------------------------------------------
.........................................................................................................................CCCTGGCTGTGCTATATTG................................................................................................................................................................................................................................................................................................................................................... 191.000.00--------------------------------------------------------1.00---------------------------
................................................................................................................................................................................................................................................................................................................................AGAGGGAGAGAACTCTCCC............................................................................................................................................ 191.000.00----------------------------------------------------------1.00-------------------------
.............................................................................................................................................................................GCTTTCTTCAGCTGGG.................................................................................................................................................................................................................................................................................................. 1640.250.25-----------0.25------------------------------------------------------------------------