| (2) AGO1.ip | (1) AGO1.ip OTHER.mut | (1) BRAIN | (1) BREAST | (11) CELL-LINE | (2) HEART | (1) HELA | (1) KIDNEY | (7) LIVER | (2) OTHER | (16) SKIN |
| GTCAGAGTCAGACCAGGGGTCTTTTACCCAAGTGGGGAAGATTGGGAAAGGCCTAGGATCAGAGAGGGAAATGGGTCCCTGGTTGCCCATGGACCTAATGGGGTCTCTCGAGCAGCAGGGGCCTTGCGCCCTGGGGGACAAGGTAGGGAGGGGGTGGCCTGGCTGCGCTGACCCGCCTACCGACCCCTCTCGACCTGCAGGACTCTGGCTACTGGAGATGGGCGCCCGGCTATCGCGGCGACGGCTGCCG ............................................................................................................................................((((.((((((((.(((...(((...........)))..))).)))))))).))))...................................................... ....................................................................................................................................133................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR207113(GSM721075) IP against AGO 1 & 2. (ago1/2 cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207114(GSM721076) IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | SRR326282(GSM769512) Dicer mRNA was knocked down using siDicer, to. (cell line) | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR189786 | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR553575(SRX182781) source: Kidney. (Kidney) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | GSM1105748AGO1(GSM1105748) small RNA sequencing data. (ago1 hela) | SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin) | SRR037935(GSM510473) 293cand3. (cell line) | SRR039615(GSM531978) Severe Chronic Hepatitis B Liver Tissue. (liver) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR189782 | SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin) | GSM450604(GSM450604) miRNA sequencing raw reads from post-mortem s. (brain) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR191408(GSM715518) 88genomic small RNA (size selected RNA from t. (breast) | SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin) | SRR330885(SRX091723) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330884(SRX091722) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR330871(SRX091709) tissue: skin psoriatic involveddisease state:. (skin) | SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................TACCGACCCCTCTCGACCTGCAG.................................................. | 23 | 1 | 34.00 | 34.00 | 23.00 | - | 2.00 | - | 1.00 | - | 1.00 | - | - | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................................................................................................TACCGACCCCTCTCGACCTGC.................................................... | 21 | 1 | 9.00 | 9.00 | 4.00 | - | - | - | 1.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................CTACCGACCCCTCTCGACCTGC.................................................... | 22 | 1 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................CTACTGGAGATGGGCGCCCGG..................... | 21 | 1 | 4.00 | 4.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................CTACCGACCCCTCTCGACCTGCAG.................................................. | 24 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - |
| ................................................................................................................................................................................CTACCGACCCCTCTCGACCTGCA................................................... | 23 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TACCGACCCCTCTCGACCTGCAT.................................................. | 23 | 1 | 3.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................CTCGAGCAGCAGGGGC................................................................................................................................ | 16 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TACCGACCCCTCTCGACCTGCA................................................... | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................ACTGGAGATGGGCGCCCGGCC................... | 21 | 2.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......TCAGACCAGGGGTCTTTTGGAG............................................................................................................................................................................................................................. | 22 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CTACCGACCCCTCTCGACCTGA.................................................... | 22 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CTACCGACCCCTCTCGAC........................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGGCTACTGGAGATGGGCGCCCGGCC................... | 26 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TACCGACCCCTCTCGACCTGCAGA................................................. | 24 | 1 | 1.00 | 34.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TACCGACCCCTCTCGACCTTCAG.................................................. | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................AGGACTCTGGCTACTGGAGATGGGCGCCCCGCC................... | 33 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................................................TATCGCGGCGACGGCTGCCGGGG | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................ACAAGGTAGGGAGGGGGTGGCCTGG........................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................TGGGGAAGATTGGGAAAGGCC..................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................CGGCTATCGCGGCGACGGC..... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................ACAAGGTAGGGAGGGGGAGTC............................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TACCGACCCCTCTCGACCTCGAG.................................................. | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................GGAGATGGGCGCCCGAGGC.................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................CTCTGGCTACTGGAGATGGGCGCCCGGCC................... | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................GACTCTGGCTACTGGAGATGGGCGCCCGGCC................... | 31 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................ACTCTGGCTACTGGAGATGGGCGCCCGGCT................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TTGCCCATGGACCTAATGGGGT.................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TACCGACCCCTCTCGACCTGCGG.................................................. | 23 | 1 | 1.00 | 9.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................AGATGGGCGCCCG...................... | 13 | 10 | 0.10 | 0.10 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.10 | - |
| GTCAGAGTCAGACCAGGGGTCTTTTACCCAAGTGGGGAAGATTGGGAAAGGCCTAGGATCAGAGAGGGAAATGGGTCCCTGGTTGCCCATGGACCTAATGGGGTCTCTCGAGCAGCAGGGGCCTTGCGCCCTGGGGGACAAGGTAGGGAGGGGGTGGCCTGGCTGCGCTGACCCGCCTACCGACCCCTCTCGACCTGCAGGACTCTGGCTACTGGAGATGGGCGCCCGGCTATCGCGGCGACGGCTGCCG ............................................................................................................................................((((.((((((((.(((...(((...........)))..))).)))))))).))))...................................................... ....................................................................................................................................133................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR207113(GSM721075) IP against AGO 1 & 2. (ago1/2 cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207114(GSM721076) IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | SRR326282(GSM769512) Dicer mRNA was knocked down using siDicer, to. (cell line) | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR189786 | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR553575(SRX182781) source: Kidney. (Kidney) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | GSM1105748AGO1(GSM1105748) small RNA sequencing data. (ago1 hela) | SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin) | SRR037935(GSM510473) 293cand3. (cell line) | SRR039615(GSM531978) Severe Chronic Hepatitis B Liver Tissue. (liver) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR189782 | SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin) | GSM450604(GSM450604) miRNA sequencing raw reads from post-mortem s. (brain) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR191408(GSM715518) 88genomic small RNA (size selected RNA from t. (breast) | SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin) | SRR330885(SRX091723) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330884(SRX091722) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR330871(SRX091709) tissue: skin psoriatic involveddisease state:. (skin) | SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................................................................CCGGCTATCGCG............. | 12 | 5 | 0.60 | 0.60 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.40 | 0.20 | - | - |
| .......................................................................TGGGTCCCTGGTTGC.................................................................................................................................................................... | 15 | 10 | 0.10 | 0.10 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.10 |