ID: uc002nyr.2
GENE: USF2(2)
chr19:35761150-35761399+


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(4)
AGO2.ip
(1)
AGO3.ip
(10)
B-CELL
(5)
BRAIN
(12)
BREAST
(32)
CELL-LINE
(4)
CERVIX
(1)
FIBROBLAST
(5)
HEART
(5)
HELA
(4)
LIVER
(3)
OTHER
(1)
RRP40.ip
(39)
SKIN
(4)
UTERUS
(2)
XRN.ip

Sense strand
ACGGATTTGCTCAGCAAGTGATCGCTGACCTCCCGCCATGTTCCAGGGCTGTTTGAAACACAGGACAGAATGCTACACGCAGAAGGAGTCCCCACTCCTGTTAATTGCAGAGAATGCAGTAAACCCCAAGCACAGCAATGAGGGGACGGGATGGAGGAACAGAGAAAGCTAAGGGTAGCCTCTGCCCTCCTACTCCCCAGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGC
.............................................................................................................................................(((((......(((((..(((((...((((....))))))))).)))))...)))))....................................................
.......................................................................................................................................136.............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189782SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189786SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR189787SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR038860(GSM458543)
MM426. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191513(GSM715623)
164genomic small RNA (size selected RNA from . (breast)
SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR037938(GSM510476)
293Red. (cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR191541(GSM715651)
63genomic small RNA (size selected RNA from t. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189783SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
............................................................................................................................................AGGGGACGGGATGGAGGAACAGA.......................................................................................23130.0030.004.00--1.005.00-5.001.00--1.001.00---2.00---1.00----1.00------------1.00--2.001.00------1.00------------------------1.001.00-------------------------------------------------1.00---
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGT.................................................21128.0018.00-1.00-----2.002.003.00-1.00-1.00----1.00--3.00-1.001.00--------------2.00------1.00---1.00----------1.00---1.00--------------1.00-1.00---------1.00----1.00-------1.00------------1.00---------
.................................................................................................................................................ACGGGATGGAGGAACAGAGAAAGC.................................................................................24120.0020.002.00-6.00-1.00-1.002.00---1.002.00------------2.00------1.00------------------------------------------------1.00------------------------------1.00---------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAG..................................................20118.0018.00-3.006.002.00-------1.00----------1.00-----2.00--------------------2.00---------------------------------------------------------1.00--------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGA.................................................21118.0018.001.004.00-1.00---1.002.001.00--------1.00---2.00-1.00----------------------1.00-------------------1.00-----------------------1.00--------------1.00---------------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGA.....................................................................................20114.0014.003.00----8.00----1.00-----------------------------------------------------------------------------------------1.00--1.00------------------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGAAA...................................................................................22113.0013.001.00---------1.00--1.00-1.00-1.00-----1.00--1.00----------1.00-------------------1.00--1.00--1.00--------------------------------------------------1.00------1.00------
.................................................................................................................................................ACGGGATGGAGGAACAGAGAAAG..................................................................................23113.0013.007.00-------1.00----1.00-----1.00---------------------------------------------------1.00-----------1.00-------------------------1.00------------------
............................................................................................................................................AGGGGACGGGATGGAGGAACAGAGA.....................................................................................25112.0012.00---4.00------1.00-----1.00------------------1.00---------2.00-1.00----------1.00------------------------------1.00--------------------------------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGAA....................................................................................2117.007.00--------------------------------------1.00---1.00-----------1.00----------------------1.00--------------------1.00-----1.00---------------------1.00-
...........................................................................................................................................GAGGGGACGGGATGGAGGAACA.........................................................................................2215.005.00----2.00-2.00-------------------------------------1.00-----------------------------------------------------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAACAGAG......................................................................................2414.004.00--------------1.00-1.00---------------------------1.00--------------1.00--------------------------------------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAACAG........................................................................................2213.003.00--------------------------------1.00----------1.00----------------------------------------1.00-------------------------------------------
...........................................................................................................................................GAGGGGACGGGATGGAGGAACAGAG......................................................................................2513.003.00----------------------------------------------------------------------------------------1.00-------------------------------1.00--1.00----
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGTT................................................2213.0018.00---------2.00---1.00------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................GAGGGGACGGGATGGAGGAACAGA.......................................................................................2413.003.00------------2.00--------------------------------------------------------------------------------1.00----------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGTAT...............................................2312.0018.00--------------------1.00---------------------------------------------------------------------------------------1.00-------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAA..................................................2012.001.00-2.00------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGAAAGT.................................................................................2412.0013.00----------------------------------------------------------------------1.00-------1.00-------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCTCAG..................................................202.000.00-2.00------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAACAGT.......................................................................................2312.003.00------------------------------1.001.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TGGCAGTCCGGCGGCCGAGGCCG232.000.00--------------2.00-----------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCCGA.................................................212.000.00------------------------------------------------------------------1.00----------------------------1.00--------------------------------
.................................................................................................................................................................GAGAAAGCTAAGGGTTTGT......................................................................192.000.00----------------------------------------------------1.00-------------------------------------------------1.00-------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGAAA...............................................2312.0018.00---------------------------------1.00----------------------------------------------------------------------------------------1.00-----
............................................................................................................................................AGGGGACGGGATGGAGGAACAGAAT.....................................................................................2512.0030.00----------1.00------------------------------------------------------------------------------------------------------------------1.00--
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGAAG...............................................2312.0018.00---------------------------1.00--------------------------------------------1.00-------------------------------------------------------
...................................................................................................................................................................................CTCTGCCCTCCTACTCCCCAGA.................................................222.000.00----------------------------------2.00---------------------------------------------------------------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAAC..........................................................................................2012.002.00--------------------1.00------------1.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCC.....................................................1721.501.50---------------------------------------------------1.50----------------------------------------------------------------------------
.............................................................AGGACAGAATGCTACACGC..........................................................................................................................................................................1911.001.00-------------------------------1.00------------------------------------------------------------------------------------------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGT.....................................................................................201.000.00-------------------------------------------------------------------------------1.00------------------------------------------------
....................................................................................................................................................................................................................................GTGGCAGTCCGGCGGCCGA...1911.001.00-----------------------------------------------------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAC..................................................2011.001.00---------------------------------------------------------------------------------------------------------------1.00----------------
......................................TGTTCCAGGGCTGTTTGAAACACAGGACA.......................................................................................................................................................................................2911.001.00------------------------------1.00-------------------------------------------------------------------------------------------------
.................................................................................................................................................ACGGGATGGAGGAACAGA.......................................................................................1811.001.00---------------------------------------------------------------------------------------1.00----------------------------------------
.............................................................................................................................................................................................................GATCCAAAATCCCTTCAG...........................1811.001.00---------------------------------------------------------------------------------------------------1.00----------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCATT.................................................2111.001.00------------------------------------1.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................ATGGTGGCAGTCCGGCGGCCGAGGCCG271.000.00-----------------------------1.00--------------------------------------------------------------------------------------------------
..........................................................................................................................................TGAGGGGACGGGATGGAGGAACAGAGA.....................................................................................2711.001.00-----------------------------------------------------------------------------------------------------1.00--------------------------
...........................................................ACAGGACAGAATGCTACACGCAGAA......................................................................................................................................................................2511.001.00--------------------------------------------------------------1.00-----------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGTAGA..............................................2411.0018.00------------------------------------------------------------------------------------------1.00-------------------------------------
..............................................................................................................................................GGGACGGGATGGAGGACACA........................................................................................201.000.00--------------------------------------------------------------------1.00-----------------------------------------------------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGAAT...................................................................................2211.007.00------------------------------------1.00-------------------------------------------------------------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAACAGAT......................................................................................2411.0030.00--------------------------------------------------------------------------------------1.00-----------------------------------------
.........................................................................................................................................ATGAGGGGACGGGATGGAGGAACAGAGAA....................................................................................2911.001.00----------------------------------------------1.00---------------------------------------------------------------------------------
........................................................................CTACACGCAGAAGGACG.................................................................................................................................................................171.000.00---------------------------------------------------------------------------------------------------------------------1.00----------
...........................................................................................................................................GAGGGGACGGGATGGAGGAACAG........................................................................................2311.001.00------------------------------------------------1.00-------------------------------------------------------------------------------
..........................................................CACAGGACAGAATGCTACACGCAGAAGGAG..................................................................................................................................................................3011.001.00---------------------------------------------------------------------1.00----------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGC.................................................2111.0018.00-----------------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAT..................................................2011.001.00-------1.00------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................ATGAGGGGACGGGATGGAG..............................................................................................1911.001.00-------------------------------------------------------------------------------------------------------------------1.00------------
.............................................................................................................................................................................................................................AGCAATGGTGGCAGTTATA..........191.000.00----------------1.00---------------------------------------------------------------------------------------------------------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGAAAGAA................................................................................2511.0013.00-----------------1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGGATGGAGGAACAGAGAAAGCTAAGGG...........................................................................2811.001.00--------------------------------------------------1.00-----------------------------------------------------------------------------
.....................................ATGTTCCAGGGCTGTTTGAAAC...............................................................................................................................................................................................2211.001.00-----------------------1.00--------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAA...........................................................................................1911.001.00--------------------------------------------------------1.00-----------------------------------------------------------------------
.............................................................AGGACAGAATGCTACACGCAGA.......................................................................................................................................................................2211.001.00-----------------------------------------------------------------------------------------------------------------------1.00--------
........................................................................................................................................................................................................................................CAGTCCGGCGGCCGAGGCTT201.000.00------------------------------------------------------------------------------------------------1.00-------------------------------
.....................................................................................................................................................................................CTGCCCTCCTACTCCCCAGT.................................................201.000.00---------------------------1.00----------------------------------------------------------------------------------------------------
......................................................................................................................................................ATGGAGGAACAGAGAAAGC.................................................................................1911.001.00---------------------------------------------------------------------------1.00----------------------------------------------------
................................................................................................................................................GACGGGATGGAGGAACGGAG......................................................................................201.000.00----------------------------------------------------------------------------------------------1.00---------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCATA.................................................2111.001.00--------1.00-----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................TGGTGGCAGTCCGGCGGCCGAGGCCG261.000.00-----------------------------1.00--------------------------------------------------------------------------------------------------
...................................................................................................................................................GGGATGGAGGAACAGAGCGC...................................................................................201.000.00------------------------------------------1.00-------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCTG..................................................201.000.00-1.00------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................AGCAATGAGGGGACGCCT...................................................................................................181.000.00--------------------------------------------------------------------------------------------------------------------1.00-----------
..........................................................................................................................................................AGGAACAGAGAAAGCGG...............................................................................171.000.00--------------------------------------1.00-----------------------------------------------------------------------------------------
...................................................TTTGAAACACAGGACAGAATGCTACACGC..........................................................................................................................................................................2911.001.00--------------------1.00-----------------------------------------------------------------------------------------------------------
......................................................................TGCTACACGCAGAAGG....................................................................................................................................................................1611.001.00-------------------------------------------------------------------------------------1.00------------------------------------------
.................................................................................................................................................................GAGAAAGCTAAGGGTTTG.......................................................................181.000.00----------------------------------------------------------------------------1.00---------------------------------------------------
..................................................................................................................................................CGGGATGGAGGAACAGAGAAAGCTA...............................................................................2511.001.00-----------------1.00--------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTCTGCCCTCCTACTCCCCAGT.................................................231.000.00---1.00----------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................GCCCTCCTACTCCCCCCTT................................................191.000.00--------------------------1.00-----------------------------------------------------------------------------------------------------
............................................................CAGGACAGAATGCTACACGCA.........................................................................................................................................................................2111.001.00-------------------------------------------1.00------------------------------------------------------------------------------------
...........................................................................................................................................GAGGGGACGGGATGGAGGAACAGT.......................................................................................2411.001.00--------------------------------------------------------------------------------------------------------------1.00-----------------
........................................................................................TCCCCACTCCTGTTATCT................................................................................................................................................181.000.00-------------------------------------------------------1.00------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCA...................................................1911.001.00-1.00------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................AATGGTGGCAGTCCGGCGGCC.....2111.001.00------------------1.00-------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAAT..........................................................................................2011.001.00-------------------1.00------------------------------------------------------------------------------------------------------------
...........................................................................................................................................GAGGGGACGGGATGGAGGAACAGG.......................................................................................2411.001.00-----------------------------------------1.00--------------------------------------------------------------------------------------
......................................TGTTCCAGGGCTGTT.....................................................................................................................................................................................................1570.140.14--------0.14-----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................CGGGATGGAGGAAC..........................................................................................1490.110.11-------------------------0.11------------------------------------------------------------------------------------------------------

Antisense strand
ACGGATTTGCTCAGCAAGTGATCGCTGACCTCCCGCCATGTTCCAGGGCTGTTTGAAACACAGGACAGAATGCTACACGCAGAAGGAGTCCCCACTCCTGTTAATTGCAGAGAATGCAGTAAACCCCAAGCACAGCAATGAGGGGACGGGATGGAGGAACAGAGAAAGCTAAGGGTAGCCTCTGCCCTCCTACTCCCCAGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGC
.............................................................................................................................................(((((......(((((..(((((...((((....))))))))).)))))...)))))....................................................
.......................................................................................................................................136.............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189782SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189786SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR189787SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR038860(GSM458543)
MM426. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191513(GSM715623)
164genomic small RNA (size selected RNA from . (breast)
SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR037938(GSM510476)
293Red. (cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR191541(GSM715651)
63genomic small RNA (size selected RNA from t. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189783SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
..............................................................................................................................................................................................TACTCCCCAGGCTGTCGG.......................................... 181.000.00-----------------------------------------------------------------------------------------------------------------1.00--------------
............................................................................................................................................................................................CCTACTCCCCAGGCTTC............................................. 171.000.00----------------------------------------------------------------1.00---------------------------------------------------------------
.......................................................................................................................................................................................GCCCTCCTACTCCCCAG.................................................. 1720.500.50-------------------------------------------------------------------------------------------------------------------------------0.50