ID: uc002mvs.2.4
GENE: FARSA(8)
chr19:13035768-13035953-


(1)
AGO1.ip
(4)
AGO2.ip
(1)
AGO3.ip
(10)
B-CELL
(4)
BRAIN
(14)
BREAST
(37)
CELL-LINE
(2)
CERVIX
(5)
HEART
(4)
HELA
(9)
LIVER
(3)
OTHER
(1)
RRP40.ip
(22)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
GTCCAGCGGGTCAAGCGGACCCACTCTCAGGGCGGCTACGGCTCACAGGGGTGAGGCAGGACTTACCTGGTATGGAAGGGAAGGAGGCTGGGGACCCCTGGGCCATTGCATGGACTTCCCACCTTCCCTCCTGAAGGTACAAGTATAACTGGAAGCTGGACGAGGCCCGGAAAAACCTACTGCGAA
.........................................................................((.((((((((.((((.(((...))).)))).......((....))..)))))))))).......................................................
......................................................................71...............................................................136................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR189782SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR029127(GSM416756)
A549. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR038857(GSM458540)
D20. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR189783SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR037937(GSM510475)
293cand2. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR189785SRR191531(GSM715641)
134genomic small RNA (size selected RNA from . (breast)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040039(GSM532924)
G531T. (cervix)
SRR029128(GSM416757)
H520. (cell line)
GSM956925AGO2Paz8(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR038859(GSM458542)
MM386. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR191472(GSM715582)
120genomic small RNA (size selected RNA from . (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR038861(GSM458544)
MM466. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR038862(GSM458545)
MM472. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925Paz8D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)
SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)
SRR189787GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR040018(GSM532903)
G701N. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR037936(GSM510474)
293cand1. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
.................................................................................................................ACTTCCCACCTTCCCTCCTGA....................................................21119.0019.00----------4.00--1.002.00--2.00----------1.00--2.00--1.00----1.00---------------1.00---1.00----1.00--1.00---------------------1.00----------------------------
.................................................................................................................ACTTCCCACCTTCCCTCCTGAA...................................................22112.0012.00--3.00--1.00---1.00-----------1.00---------------1.00--1.00---------------------------------1.00------------1.00----------------1.001.00------------
.................................................................................................................ACTTCCCACCTTCCCTCCTGAAG..................................................23112.0012.00--------------1.00--1.00---1.00--------1.00--------1.00--------1.00-------1.00---------------------------1.001.00-----1.00----1.00-1.00-------------------
...........................................................................AAGGGAAGGAGGCTGGGGACCCC........................................................................................2319.009.00-----2.00----------2.00---1.00--------1.00--------1.00---1.00------------------1.00--------------------------------------------------------
........................................................................TGGAAGGGAAGGAGGCTGGGGACT..........................................................................................247.000.00-6.00--------------------------1.00-----------------------------------------------------------------------------------------
.................................................................................................................ACTTCCCACCTTCCCTCCTGAAT..................................................2317.0012.00--1.00-----------1.00---------------------------1.00-------1.00---1.00---1.00-----------------------------------1.00-----------------------
.................................................................................................................ACTTCCCACCTTCCCTCCTGAAGT.................................................2416.0012.00-----1.00------------------------------1.001.00------2.00-------------------------1.00-----------------------------------------------
........................................................CAGGACTTACCTGGTATGGAAGGG..........................................................................................................2416.006.00-6.00--------------------------------------------------------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGAC...........................................................................................2015.005.00---1.00--2.00---------1.00---------------------1.00-------------------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGACC..........................................................................................2114.004.00--------------------1.00---1.00----1.00-----------------------------------------------------------------------1.00----------------
.................................................................................................................ACTTCCCACCTTCCCTCCTGAAA..................................................2314.0012.00-------------------2.00-------------------------------------1.00----------------------------1.00-------------------------------
...................................................................................................................................................ACTGGAAGCTGGACGAGGCCC..................2114.004.004.00---------------------------------------------------------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGACCC.........................................................................................2214.004.00--2.00--1.00---------------------------------------------------------------------1.00------------------------------------------
.................................................................................................................................................TAACTGGAAGCTGGACGAGGCCCG.................2413.003.003.00---------------------------------------------------------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGACCCT........................................................................................2313.004.00---1.00-------------------2.00----------------------------------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGACCAAAA......................................................................................2513.004.00---3.00------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GTATAACTGGAAGCTGGACGAGGCCCG.................2713.003.00---------2.00-------------------------------------------------------------------------------------------------1.00----------
..........................................................................................................................................................GCTGGACGAGGCCCGCC...............173.000.00-----------1.00-------------1.00--------------1.00-----------------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGACA..........................................................................................2113.005.00----3.00-----------------------------------------------------------------------------------------------------------------
.................................................................................................................ACTTCCCACCTTCCCTCCTG.....................................................2013.003.00-------------2.00--------------------1.00-----------------------------------------------------------------------------------
............................................................................AGGGAAGGAGGCTGGGGACC..........................................................................................2012.002.001.00-----------------------1.00---------------------------------------------------------------------------------------------
................................................................................................................GACTTCCCACCTTCCCTCCTGAAA..................................................242.000.00-------2.00--------------------------------------------------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGACCAA........................................................................................2312.004.00-----------------------------------2.00----------------------------------------------------------------------------------
..........................................................................................................................................................GCTGGACGAGGCCCGGAA..............1812.002.00------------------2.00---------------------------------------------------------------------------------------------------
........................................................................TGGAAGGGAAGGAGGCTGGGGACCC.........................................................................................2512.002.00------2.00---------------------------------------------------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGACCCCAA......................................................................................2512.009.00---------------------1.00-----------------------------------------1.00------------------------------------------------------
..........................................................................................................................................................GCTGGACGAGGCCCGCCGC.............192.000.00-----------2.00----------------------------------------------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGACCCCT.......................................................................................2412.002.00------------1.00----------1.00----------------------------------------------------------------------------------------------
....................................................................................................................................................CTGGAAGCTGGACGAGGCCCGGAA..............2412.002.00----------------------2.00-----------------------------------------------------------------------------------------------
..................................................................................................................CTTCCCACCTTCCCTCCTGAAG..................................................2212.002.00--------------------------------------------------------------1.00-----------------1.00-------------------------------------
.............................................................................................................................................AGTATAACTGGAAGCTGGACGAGGCCC..................2712.002.00--------------------------1.00-----1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................TGGAAGCTGGACGAGGCCCGGAAAA............2511.001.00---------------------------------------------------------------------------------------------------1.00------------------
.......................................................................ATGGAAGGGAAGGAGGCTGGGGA............................................................................................2311.001.00----------------------------------------------1.00-----------------------------------------------------------------------
........................................................................TGGAAGGGAAGGAGGCTGGG..............................................................................................2021.001.00-------------------------------------------1.00--------------------------------------------------------------------------
...............CGGACCCACTCTCAGGGCGGCTA....................................................................................................................................................2311.001.00-------------------------------------------------------------------------------------------------------1.00--------------
...........CAAGCGGACCCACTCTCAGGGCGGCTAC...................................................................................................................................................2811.001.00-----------------------------------------------------------------------1.00----------------------------------------------
........................................................................TGGAAGGGAAGGAGGCTGGGG.............................................................................................2111.001.00-------1.00--------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TATAACTGGAAGCTGGACGAGGCC...................2411.001.001.00---------------------------------------------------------------------------------------------------------------------
....................................................................................................................................GAAGGTACAAGTATAAG.....................................171.000.00-------------1.00--------------------------------------------------------------------------------------------------------
..................................................................................................................................................AACTGGAAGCTGGACGAG......................1811.001.00------------------------------------------------------------------1.00---------------------------------------------------
.........................................................................................................................................................AGCTGGACGAGGCCCGGAA..............1911.001.00---------------1.00------------------------------------------------------------------------------------------------------
................................................................................................................................................ATAACTGGAAGCTGGACGAGGCCCG.................2511.001.001.00---------------------------------------------------------------------------------------------------------------------
......................................................................TATGGAAGGGAAGGAGGCTGGGGATAT.........................................................................................271.000.00-------1.00--------------------------------------------------------------------------------------------------------------
.......................................................................ATGGAAGGGAAGGAGGCTGGGGACC..........................................................................................2511.001.00---------------------------------1.00------------------------------------------------------------------------------------
.......................................................................................................................................................GAAGCTGGACGAGGCCCGGAAAAA...........2411.001.00-----------------------------------------------1.00----------------------------------------------------------------------
.....................................................................GTATGGAAGGGAAGGAGGCTGGA..............................................................................................231.000.00----1.00-----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TACAAGTATAACTGGAAGCTG............................2111.001.00-----------------------------------------1.00----------------------------------------------------------------------------
...............................................................................................................................................TATAACTGGAAGCTGGACGAGGCCCG.................2611.001.001.00---------------------------------------------------------------------------------------------------------------------
.........................................................................GGAAGGGAAGGAGGCTGGGGAC...........................................................................................2211.001.00---------------------------------------------------------------------------------1.00------------------------------------
.................................................................................................................................................TAACTGGAAGCTGGACGAGGCC...................2211.001.00---------------------------------------------------------------------------------------------1.00------------------------
............................................................................AGGGAAGGAGGCTGGGGACTTT........................................................................................221.000.00----1.00-----------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CTGGAAGCTGGACGAGGCCCGGCA..............241.000.00----------------------1.00-----------------------------------------------------------------------------------------------
...................................................................................................................................................ACTGGAAGCTGGACGAGGCCCGGAA..............2511.001.00--------1.00-------------------------------------------------------------------------------------------------------------
................................................................................................................................................ATAACTGGAAGCTGGACGA.......................1911.001.00----------------------------------------------------------------------------1.00-----------------------------------------
........................................................................TGGAAGGGAAGGAGGCTGGGGACAC.........................................................................................251.000.00------------------------------------------------------------------------1.00---------------------------------------------
.................................................................................................................................................TAACTGGAAGCTGGACGAGGCCT..................2311.001.00----------------------------------------------------------------------------------------1.00-----------------------------
.......................................................................................................................................GGTACAAGTATAACTGGAAGCTGG...........................2411.001.00--------1.00-------------------------------------------------------------------------------------------------------------
......................................................................................................................................................GGAAGCTGGACGAGGCCCGGAAAAACC.........2711.001.00------------------------------------------------------------1.00---------------------------------------------------------
................................CGGCTACGGCTCACAGGG........................................................................................................................................1811.001.00--------------------------------------------------------------------1.00-------------------------------------------------
..................................................................................................................................................AACTGGAAGCTGGACGAGGCCCGGA...............2511.001.00----------------------------------------------------1.00-----------------------------------------------------------------
.................................................................................................................ACTTCCCACCTTCCCTCCTGAAGTT................................................2511.0012.00---------------------------------------------------1.00------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGACCCCTCT.....................................................................................2611.002.00-----------------------------------------------------1.00----------------------------------------------------------------
..................................................................................................................................................AACTGGAAGCTGGACGAGGCCCG.................2311.001.00-------------------------------------------------------------------------1.00--------------------------------------------
............................................................................................................................................AAGTATAACTGGAAGCTGGACGAGGC....................2611.001.00----------------------------------------------------------------------------------------------------1.00-----------------
...........CAAGCGGACCCACTCTCAGGG..........................................................................................................................................................2111.001.00------------------------------------------------------------------------------1.00---------------------------------------
.............AGCGGACCCACTCTCAGGGCGGCTAC...................................................................................................................................................2611.001.00---------1.00------------------------------------------------------------------------------------------------------------
...............CGGACCCACTCTCAGGGCGGC......................................................................................................................................................2111.001.00----------------------------------------------------------------------------------------------------------1.00-----------
.............AGCGGACCCACTCTCAGGGCGGCTA....................................................................................................................................................2511.001.00--------1.00-------------------------------------------------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGA............................................................................................1921.001.00-------------------------------------------------------------------------------------------------------------0.500.50-------
....................................................................GGTATGGAAGGGAAGGAGGC..................................................................................................2011.001.00-------------------------1.00--------------------------------------------------------------------------------------------
...................................................................................GAGGCTGGGGACCCCTC......................................................................................171.000.00-----------------------------------------------------------------------------1.00----------------------------------------
......................................................................................................................................................GGAAGCTGGACGAGGAAT..................181.000.00------------------------------1.00---------------------------------------------------------------------------------------
.................................................................................................................ACTTCCCACCTTCCCTCCTGATT..................................................2311.0019.00-------------------------------------------------------------------------------1.00--------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGACCCTT.......................................................................................2411.004.00------------1.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................................................AGCTGGACGAGGCCCGGAAA.............2011.001.00---------------------------------1.00------------------------------------------------------------------------------------
...........................................................................................................................................................CTGGACGAGGCCCGGAAAAA...........2011.001.00---------------1.00------------------------------------------------------------------------------------------------------
........................................................................................................................................GTACAAGTATAACTGGAAGCTGGACGA.......................2711.001.00-----------------------------------------------------------------1.00----------------------------------------------------
..........................................................................................................................................ACAAGTATAACTGGAAGCTGGACG........................2411.001.00-----------------------------------------------------------------------------------------------1.00----------------------
........................................................................................................................................................AAGCTGGACGAGGCCTTG................181.000.00------------------1.00---------------------------------------------------------------------------------------------------
........................................................................................................................................GTACAAGTATAACTGGAAGCTG............................2211.001.00--------------------------------1.00-------------------------------------------------------------------------------------
.........................................................................................................................................TACAAGTATAACTGGCTTG..............................191.000.00------------------------------------1.00---------------------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGACTTA........................................................................................2311.005.001.00---------------------------------------------------------------------------------------------------------------------
......................................................................TATGGAAGGGAAGGAGGCTGGGGAAT..........................................................................................261.000.00------------------------------------------------------------------------------------------------------1.00---------------
..................................................................................................................................................AACTGGAAGCTGGACGAGGCC...................2111.001.00--------------------------------------------------------------------------------------------1.00-------------------------
.................................................................................................................ACTTCCCACCTTCCCTCCTTA....................................................2111.001.00------------1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................CTTCCCACCTTCCCTCCTGAAGA.................................................2311.002.00----------------------------------------------------------------------------------1.00-----------------------------------
..............................................................................................................................................GTATAACTGGAAGCTGGACTGCC.....................231.000.00--------1.00-------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TATAACTGGAAGCTGGACGA.......................2011.001.00---------------1.00------------------------------------------------------------------------------------------------------
...........CAAGCGGACCCACTCTCAGGGCA........................................................................................................................................................231.000.00---1.00------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACAAGTATAACTGGAAGCTGGACGAGGCCGGG................321.000.00---------------------------1.00------------------------------------------------------------------------------------------
............AAGCGGACCCACTCTCAGGGCGTCTA....................................................................................................................................................261.000.00--------------------------1.00-------------------------------------------------------------------------------------------
...................................................................TGGTATGGAAGGGAAGGAGGC..................................................................................................2111.001.00------------------------------------------------------------------------------------------1.00---------------------------
.................................................................................................................ACTTCCCACCTTCCCTCCT......................................................1911.001.00-------------------------------------------------1.00--------------------------------------------------------------------
.................................................................................................................ACTTCCCACCTTCCCTCCTCAAA..................................................2311.001.00-------------------1.00--------------------------------------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGACCCAAA......................................................................................2511.004.00--------------------1.00-------------------------------------------------------------------------------------------------
........................................................................................................................................GTACAAGTATAACTGGAAGCTGGACG........................2611.001.00---------------------------------------------1.00------------------------------------------------------------------------
..........................TCAGGGCGGCTACGGC................................................................................................................................................1611.001.00-----------1.00----------------------------------------------------------------------------------------------------------
..........................TCAGGGCGGCTACGGCTCACAGGGGGT.....................................................................................................................................271.000.00---------------------------1.00------------------------------------------------------------------------------------------
......................................................................TATGGAAGGGAAGGAGGCTA................................................................................................201.000.00---------------------------------------------------------------------1.00------------------------------------------------
...........CAAGCGGACCCACTCTCAGGGCGG.......................................................................................................................................................2411.001.00------1.00---------------------------------------------------------------------------------------------------------------
.................................................................................................................ACTTCCCACCTTCCCTCCTGAAGC.................................................2411.0012.00-----------------------------------------------------------------------------------1.00----------------------------------
..................................................................................................................CTTCCCACCTTCCCTCCTG.....................................................1911.001.00-------------------------------------------1.00--------------------------------------------------------------------------
..................................................................................................................................................AACTGGAAGCTGGACGAGGCCCGGAA..............2611.001.00-------------------------------------------------------------------------------------------------1.00--------------------
........................................................................................................................................................AAGCTGGACGAGGCCCGCC...............191.000.00------------1.00---------------------------------------------------------------------------------------------------------
.............................................................................................................................................AGTATAACTGGAAGCTGGACGA.......................2211.001.00-----------------------------------------1.00----------------------------------------------------------------------------
...........................................................................................................................................................CTGGACGAGGCCCG.................1450.600.60---------------------------------------------------------------------------------------------------------------0.40----0.20-
...........................................................................AAGGGAAGGAGGCTGGGGATTTT........................................................................................2320.501.000.50---------------------------------------------------------------------------------------------------------------------
......................................................................TATGGAAGGGAAGGAGGC..................................................................................................1820.500.50------------------------------------------------------------------------------------------------------------0.50---------
.................................................................................................................................................TAACTGGAAGCTGGAC.........................1620.500.50---------------------------------------------0.50------------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGGAGA..........................................................................................2120.501.00-----0.50----------------------------------------------------------------------------------------------------------------
........................................................................TGGAAGGGAAGGAGGCTGG...............................................................................................1920.500.50----0.50-----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................GAGGCCCGGAAAAA...........1470.430.43------------------------------------------------0.14-----------------------------------------------------------------0.29---
...........................................................................AAGGGAAGGAGGCTGGGG.............................................................................................1830.330.33-----------------------------------------------------------------------------------------------------------------0.33----
...........................................................................AAGGGAAGGAGGCTGGGGTAT..........................................................................................2130.330.33----------------------------------------------------------------------------------------------------------------0.33-----
......................................................................TATGGAAGGGAAGGAGG...................................................................................................1740.250.25----------------------------------------------0.25-----------------------------------------------------------------------
............................AGGGCGGCTACGGC................................................................................................................................................1440.250.25-------------------------------------------------------------------------------------------------------------------0.25--
...........................................................................AAGGGAAGGAGGCTGGG..............................................................................................1770.140.14-----------------------------------------------0.14----------------------------------------------------------------------
...........................................................................AAGGGAAGGAGGCTGGGCG............................................................................................1970.140.14---------------------------------------------------------------------------------------------------------------------0.14
...........................................................................AAGGGAAGGAGGCTGGGCAAG..........................................................................................2170.140.14------------------------0.14---------------------------------------------------------------------------------------------

Antisense strand
GTCCAGCGGGTCAAGCGGACCCACTCTCAGGGCGGCTACGGCTCACAGGGGTGAGGCAGGACTTACCTGGTATGGAAGGGAAGGAGGCTGGGGACCCCTGGGCCATTGCATGGACTTCCCACCTTCCCTCCTGAAGGTACAAGTATAACTGGAAGCTGGACGAGGCCCGGAAAAACCTACTGCGAA
.........................................................................((.((((((((.((((.(((...))).)))).......((....))..)))))))))).......................................................
......................................................................71...............................................................136................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR189782SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR029127(GSM416756)
A549. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR038857(GSM458540)
D20. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR189783SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR037937(GSM510475)
293cand2. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR189785SRR191531(GSM715641)
134genomic small RNA (size selected RNA from . (breast)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040039(GSM532924)
G531T. (cervix)
SRR029128(GSM416757)
H520. (cell line)
GSM956925AGO2Paz8(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR038859(GSM458542)
MM386. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR191472(GSM715582)
120genomic small RNA (size selected RNA from . (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR038861(GSM458544)
MM466. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR038862(GSM458545)
MM472. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925Paz8D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)
SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)
SRR189787GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR040018(GSM532903)
G701N. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR037936(GSM510474)
293cand1. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
.TCCAGCGGGTCAA............................................................................................................................................................................ 13100.100.10-------------------------------------------------0.10--------------------------------------------------------------------