ID: uc002muf.2
GENE: DHPS(2)
chr19:12787976-12788154-


(2)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(4)
B-CELL 		(1)
BRAIN 		(9)
BREAST 		(24)
CELL-LINE 		(2)
HEART 		(6)
HELA 		(3)
LIVER 		(3)
OTHER 		(18)
SKIN 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
CTTCTTCCATTCCTACAAGAACCCGGGCCTGGTCCTGGACATCGTTGAGGGTGAGGCGCTAGGGCCACAGAGGAGAGGGGAAGGAGGGCTGGCTGAGTCCAAGGCCTGACTTCGGCGCTCTTCCCCCAGACCTGAGGCTCATCAACACACAGGCCATCTTTGCCAAGTGCACTGGGATG
............................................................................((((.(((((.((((...(((((........))))))))).))))).))))....................................................
......................................................................71........................................................129................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189782SRR037936(GSM510474)
293cand1. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577740(Rovira)
total RNA. (breast)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		TAX577453(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR189784SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR037935(GSM510473)
293cand3. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR189787SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR189786SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............................................................................................................CTTCGGCGCTCTTCCCCCAGT.................................................21146.009.009.006.00--5.002.00-1.002.003.00-------1.00-1.00--1.00------1.00-----1.00-1.00-1.00---1.00------1.00-1.001.00-----1.00-1.00-1.001.00---1.00--1.001.00---
.............................................................................................................CTTCGGCGCTCTTCCCCCAGA.................................................21119.0019.009.002.00---1.00--1.00----2.00-1.00-------1.00-1.00----------------------------------------1.00---------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTT................................................22116.009.004.002.0010.00-------------------------------------------------------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCCAGT.................................................22114.002.009.00--1.00----------2.00--1.00-------------1.00--------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAG..................................................2019.009.003.00----------2.001.00-----------------------1.00----------1.00--------1.00-------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTATC..............................................2415.009.00------5.00---------------------------------------------------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCCAGA.................................................2215.005.004.00------------------1.00--------------------------------------------------------
................................TCCTGGACATCGTTGAGG.................................................................................................................................1812.002.00----------1.00-----------------------1.00-----------------------------------------
..............................................................................................................TTCGGCGCTCTTCCCCCAGACA...............................................222.000.002.00---------------------------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCCGT.................................................212.000.00------------------------------------------------------------1.00--------1.00------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTAA...............................................2312.009.00-1.00--------------------1.00-----------------------------------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCCAG..................................................2112.002.00---1.00-----------1.00------------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTA................................................2212.009.00-------1.00-------------------------------------------1.00------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGAC................................................2212.002.00----------------2.00-----------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTGA...............................................2312.009.002.00---------------------------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGAA................................................2212.0019.001.00-------------------------------------1.00-------------------------------------
............CTACAAGAACCCGGGCCTGGT..................................................................................................................................................2112.002.00-----------------------------------------1.00-------------------------1.00--------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTTT...............................................2312.009.00---------------------------------1.00--------------------1.00---------------------
.............................................................................GGGAAGGAGGGCTGGCGGCA..................................................................................201.000.00---------------------------------------------------------1.00------------------
...........................................................................AGGGGAAGGAGGGCTTTTT.....................................................................................191.000.00----------------------------------------1.00-----------------------------------
.........................................................................................................................................CTCATCAACACACAGGCCATCTTTG.................2511.001.00---1.00------------------------------------------------------------------------
...........................................................................AGGGGAAGGAGGGCTGGCTGAGA.................................................................................231.000.00-----------------------1.00----------------------------------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCCTGT.................................................221.000.00------------------------------------------1.00---------------------------------
........................GGGCCTGGTCCTGGACATCGTT.....................................................................................................................................2211.001.00---------------------------1.00------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAT..................................................201.000.00---1.00------------------------------------------------------------------------
.................................CCTGGACATCGTTGAGGAC...............................................................................................................................1911.001.00----------------------------------------------------------------------1.00-----
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTAT...............................................2311.009.00---------------------1.00------------------------------------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCCA...................................................2011.001.00---1.00------------------------------------------------------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCCAGAC................................................2311.001.00---------------------------------------------1.00------------------------------
.........................................................................AGAGGGGAAGGAGGGCTGGCTGAGT.................................................................................2511.001.00----------------------------1.00-----------------------------------------------
.........................................................................AGAGGGGAAGGAGGGCTGGCTGAGTC................................................................................2611.001.00---------------------1.00------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTAAT..............................................2411.009.001.00---------------------------------------------------------------------------
..........................................................................GAGGGGAAGGAGGGCTGGCTGAGT.................................................................................2411.001.00------------------1.00---------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCAGA..................................................201.000.00------------------------------------------------1.00---------------------------
...........................................................................................................GACTTCGGCGCTCTTCCCCCAG..................................................2211.001.00---1.00------------------------------------------------------------------------
...........................................................................AGGGGAAGGAGGGCTGGCTGA...................................................................................2111.001.00-------------------------------------------------------1.00--------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGCAA...............................................2311.009.00-----1.00----------------------------------------------------------------------
.................AGAACCCGGGCCTGGTCCTGGACATCGTTGAGG.................................................................................................................................3311.001.00-------1.00--------------------------------------------------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCAGT..................................................211.000.00---1.00------------------------------------------------------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCCAGAT................................................2311.005.001.00---------------------------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGC.................................................2111.009.00------------1.00---------------------------------------------------------------
..............................................................................................................TTCGGCGCTCTTCCCCCAGT.................................................201.000.00-----------------------------------------------------------------1.00----------
.................AGAACCCGGGCCTGGTCCTGGACA..........................................................................................................................................2411.001.00----------------------------------------------1.00-----------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTAG...............................................2311.009.00-----1.00----------------------------------------------------------------------
.......................CGGGCCTGGTCCTGGACATCGTTT....................................................................................................................................241.000.00----------------------------------------------------------1.00-----------------
............................................................................................................ACTTCGGCGCTCTTCCCCCAT..................................................2111.001.00---1.00------------------------------------------------------------------------
............................................................................GGGGAAGGAGGGCTGGCTT....................................................................................191.000.00--------------------------------------------1.00-------------------------------
..................GAACCCGGGCCTGGTCCTGGACATCGTTGAGGC................................................................................................................................331.000.00-------1.00--------------------------------------------------------------------
.................................CCTGGACATCGTTGAGG.................................................................................................................................1711.001.00-------------------------------------------------1.00--------------------------
............CTACAAGAACCCGGGCCTGG...................................................................................................................................................2011.001.00--------------------------------------------------------------1.00-------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGAAA...............................................2311.0019.00--------------------------------1.00-------------------------------------------
...................................TGGACATCGTTGAGG.................................................................................................................................1520.500.50-------0.50--------------------------------------------------------------------
................AAGAACCCGGGCCTGG...................................................................................................................................................1620.500.50-------------------------------------------------------------------------0.50--
..................................................GTGAGGCGCTAGGG...................................................................................................................1450.200.20----------0.20-----------------------------------------------------------------
.....................................................................................................AGGCCTGACTTCGG................................................................1450.200.20--------------------------------------------------------------------------0.20-
....................................................................................................AAGGCCTGACTTCG.................................................................1470.140.14---------------------------------------------------------------------------0.14

Antisense strand
CTTCTTCCATTCCTACAAGAACCCGGGCCTGGTCCTGGACATCGTTGAGGGTGAGGCGCTAGGGCCACAGAGGAGAGGGGAAGGAGGGCTGGCTGAGTCCAAGGCCTGACTTCGGCGCTCTTCCCCCAGACCTGAGGCTCATCAACACACAGGCCATCTTTGCCAAGTGCACTGGGATG
............................................................................((((.(((((.((((...(((((........))))))))).))))).))))....................................................
......................................................................71........................................................129................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189782SRR037936(GSM510474)
293cand1. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577740(Rovira)
total RNA. (breast)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		TAX577453(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR189784SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR037935(GSM510473)
293cand3. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR189787SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR189786SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................CTCTTCCCCCAGACCTGC............................................ 182.000.00--------------------2.00-------------------------------------------------------
...........................CCTGGTCCTGGACATCG....................................................................................................................................... 1711.001.00----------1.00-----------------------------------------------------------------
........................................................................................................CCTGACTTCGGCGCTCTTCCCCCAGACCTGAG........................................... 3211.001.00------------------1.00---------------------------------------------------------
............................................................................................................................CCCAGACCTGAGGCTCCC..................................... 181.000.00------------------------1.00---------------------------------------------------
....................................................GAGGCGCTAGGGCCACATCGG.......................................................................................................... 211.000.00------------------------------1.00---------------------------------------------
......CCATTCCTACAAGAACCCG.......................................................................................................................................................... 1911.001.00--------------------------1.00-------------------------------------------------