ID: uc002mki.6
GENE: ADAMTS10(6)
chr19:8651556-8651749-


(1)
AGO1.ip
(2)
B-CELL
(9)
BRAIN
(3)
BREAST
(6)
CELL-LINE
(1)
CERVIX
(3)
HEART
(4)
LIVER
(1)
OTHER
(1)
RRP40.ip
(32)
SKIN
(3)
UTERUS
(1)
XRN.ip

Sense strand
CTCCGTCCACATCTTCATCCAGGATCTGAACCTCTCTCTCAGTCACTTGGGTGAGCAGATGGTGGGGAGGGGATGAGGATTAGGGGTCAGTGGGGAGGGCGGTTTCAGCATGACTAGAATTCTGAACCCTGCATCGTCCCCCAGCCCTGAAGGGAGACCAGGAGTCCCTGCTGCTGGAGGGGCTGCCTGGGACC
...........................................................................................(((((((((((.(((((.((.......)).))))).)).)).)).))))).....................................................
....................................................................................85.........................................................144................................................
SizePerfect hitTotal NormPerfect NormSRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR189787SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR189783SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
.........................................................................................................................CTGAACCCTGCATCGTCCCCCAGT.................................................24131.0010.001.003.004.002.00--2.001.00-----1.001.00-1.00-1.00---1.00--1.001.001.00-----1.00----1.00-1.00--1.00--1.00-1.00-1.00-----1.00--1.001.00------
.........................................................................................................................CTGAACCCTGCATCGTCCCCCAG..................................................23110.0010.00-1.00----1.00--------1.00---1.00----1.00-------1.00---------1.00-1.00---------1.00-------1.00----
.........................................................................................................................CTGAACCCTGCATCGTCCCCCA...................................................2219.009.00-----1.00-1.00---1.00-1.00---1.00-----1.00------1.00--------1.00-1.00-------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCCC....................................................2116.006.00----3.002.00-----1.00-------------------------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCCCAGA.................................................2413.0010.00--------------------1.00----------------------------1.00-------1.00---------
.........................................................................................GTGGGGAGGGCGGTTTCAGC.....................................................................................2012.002.00--------2.00----------------------------------------------------------
................................................................................................................ACTAGAATTCTGAACTCTG...............................................................192.000.00-------------------------------1.00-------------1.00---------------------
..........................................................................................................................TGAACCCTGCATCGTCCCCCAGT.................................................232.000.00----------1.00---1.00----------------------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCC......................................................1912.002.001.00----------------------------1.00-------------------------------------
.......................................................................................CAGTGGGGAGGGCGGTTTT........................................................................................191.000.00----------1.00--------------------------------------------------------
...............................................TGGGTGAGCAGATGGTGAGGA..............................................................................................................................211.000.00-------1.00-----------------------------------------------------------
........................................................................................................................................................................TGCTGCTGGAGGGGCTGGTG......201.000.00---------1.00---------------------------------------------------------
........................................................................................AGTGGGGAGGGCGGTTTCAGTTA...................................................................................231.000.00----------------------------------------------------------1.00--------
...............CATCCAGGATCTGAAAAAA................................................................................................................................................................191.000.00---------------------1.00---------------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCCCAGTT................................................2511.0010.00---1.00---------------------------------------------------------------
.......................................................................................................................TTCTGAACCCTGCATCGTCCCCCATA.................................................261.000.00---------------1.00---------------------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCCCT...................................................2211.006.00-----------------1.00-------------------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCA.....................................................2011.002.00----1.00--------------------------------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCCCAT..................................................2311.009.001.00------------------------------------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCTTAG..................................................2311.002.00------------1.00------------------------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCCCAC..................................................2311.009.00---------1.00---------------------------------------------------------
........................................................................................................................TCTGAACCCTGCATCGTCCCCCAG..................................................2411.001.00--------1.00----------------------------------------------------------
.........................................................................................GTGGGGAGGGCGGTTTCTA......................................................................................191.000.00-----------------------------------------------------1.00-------------
.........................................................................................................................CTGAACCCTGCATCGTCCCCCAAT.................................................2411.009.00---1.00---------------------------------------------------------------
.........................................................................................GTGGGGAGGGCGGTTAA........................................................................................171.000.00-----------------------------------------------1.00-------------------
..........................................................................................TGGGGAGGGCGGTTTCAGCAT...................................................................................2111.001.00-----------------------------------1.00-------------------------------
..........................................................................................................................TGAACCCTGCATCGTCCCC.....................................................1911.001.00------------------------------------1.00------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCC.....................................................2011.001.001.00------------------------------------------------------------------
..............................................................TGGGGAGGGGATGAGTTG..................................................................................................................181.000.00-------------------------------------------------------------1.00-----
...............................................TGGGTGAGCAGATGGACC.................................................................................................................................181.000.00----------------------------1.00--------------------------------------
............................................................................................................CATGACTAGAATTCTG......................................................................1650.400.40------------------0.20---------------------------------------------0.20--
......................................................................................................TTTCAGCATGACTAGA............................................................................1630.330.33---------------------------------------------------------------0.33---
..................................................................................................................................................................................GGGGCTGCCTGGGACC1660.170.17-----------------------------------------------------------------0.17-

Antisense strand
CTCCGTCCACATCTTCATCCAGGATCTGAACCTCTCTCTCAGTCACTTGGGTGAGCAGATGGTGGGGAGGGGATGAGGATTAGGGGTCAGTGGGGAGGGCGGTTTCAGCATGACTAGAATTCTGAACCCTGCATCGTCCCCCAGCCCTGAAGGGAGACCAGGAGTCCCTGCTGCTGGAGGGGCTGCCTGGGACC
...........................................................................................(((((((((((.(((((.((.......)).))))).)).)).)).))))).....................................................
....................................................................................85.........................................................144................................................
SizePerfect hitTotal NormPerfect NormSRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR189787SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR189783SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
.................TCCAGGATCTGAACCCGAG.............................................................................................................................................................. 194.000.00------------1.00---------------------1.00----------------1.00---1.00-----------
.TCCGTCCACATCTTCATCCAG............................................................................................................................................................................ 2111.001.00----------------1.00--------------------------------------------------
.................TCCAGGATCTGAACCAGAG.............................................................................................................................................................. 191.000.00----------------------------------------------------1.00--------------
..................................................................................................................................................................AGTCCCTGCTGCTGGGCGC............. 191.000.00-------------------------------------1.00-----------------------------
..........................................................................................................................................CCCCAGCCCTGAAGGG........................................ 16100.100.10------------------------------------------------------------------0.10