ID: uc002lrp.2
GENE: MIDN(3)
chr19:1253966-1254215+


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(1)
AGO3.ip 		(13)
B-CELL 		(7)
BRAIN 		(13)
BREAST 		(41)
CELL-LINE 		(4)
CERVIX 		(2)
FIBROBLAST 		(4)
HEART 		(8)
HELA 		(4)
LIVER 		(1)
OTHER 		(1)
OTHER.ip 		(1)
RRP40.ip 		(29)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CCGGGCCGGGCCGGGCTGGCGGAGGAGGCTTCCGGAAATACAGATTCATTTTATTTAAGCGTCCGTGGCACCGACAGGGACCCCAGAGCCCAGAGAGGGGCGGCGAGAGGCCCCAGGTCACAGCGCGGGGGGACTGGGCCGGGCTGGGCTGGGGGCGCCGCAAGCTGGGGCTCCCAGCTGACGGACCGCTCTCCTTGCAGGTCAGTGACTTCCTGTCGGGCCGTTCGCCACTGACACTGGCCTTGCGTGT
............................................................................................................................(((((((((.(((.(((.....((((((((((.(((.....))).))))))))))..))).))).)))))))))....................................................
.......................................................................................................................120.............................................................................200................................................
SizePerfect hitTotal NormPerfect NormGSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189782DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR189783SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR189786SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR038856(GSM458539)
D11. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR038855(GSM458538)
D10. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105751AGO4(GSM1105751)
small RNA sequencing data. (ago4 hela)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR189784SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577453(Rovira)
total RNA. (breast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038853(GSM458536)
MELB. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR038858(GSM458541)
MEL202. (cell line)		GSM956925F181A(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR040029(GSM532914)
G026T. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577739(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191522(GSM715632)
93genomic small RNA (size selected RNA from t. (breast)		TAX577742(Rovira)
total RNA. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCAGT.................................................23158.0019.0013.003.003.001.00-3.003.002.001.00--3.001.00-5.00--2.001.00-----1.001.00-1.00--1.00-2.00------------1.00---2.00---------------------1.00-------------1.001.001.00-----------------1.00---1.00------1.00--1.00-----------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCAGA.................................................23125.0019.004.003.004.002.00-2.00----1.00-1.00---1.00---1.00----2.00---------------1.00---------------------1.00---------------------------------------1.00----1.00----------------------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCAG..................................................22119.0019.00-5.003.00--1.00-1.00-----------------------2.00-1.00------1.00--1.00-1.00-------------1.00--------------1.00--------------------1.00-----------------------------------
.................................................................................................................................................................................CTGACGGACCGCTCTCCTTGCA...................................................22114.0014.002.00-2.005.00---1.00---1.00-------------------------------1.00--------------------------------------------------1.00--1.00---------------------------------
.................................................................................................................................................................................CTGACGGACCGCTCTCCTTGCAG..................................................23113.0013.00------1.00-----------2.00-1.00---1.00----1.002.00-------1.00-1.00------1.00--------1.00------------------------------------------------------------------1.00-------
.................................................................................................................................................................................CTGACGGACCGCTCTCCTTGCAGT.................................................24112.0013.00----------2.00------1.00-----------------1.00--------1.00-2.001.00------------------1.00-------------------------1.001.00-----1.00-------------------------------
.................................................................................................................................................................................CTGACGGACCGCTCTCCTTGCAGA.................................................24111.0013.00-4.001.00--1.001.00------------------------------1.001.00---------------------------------------------------------1.00--------------1.00-------------------
.................................................................................................................................................................................CTGACGGACCGCTCTCCTTGC....................................................21110.0010.001.00--1.00---2.00---1.00---------2.00-----------1.00--2.00----------------------------------------------------------------------------------------------
......................................................................................................................................................................................GGACCGCTCTCCTTGCAG..................................................1819.009.00----9.00------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................TGGGCCGGGCTGGGCTGGGGGCGCCGCAAGCTGGGGCTCCCAGCTGACGGACCGCTCTCCTTGCAG..................................................6617.007.00---------7.00-------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................CGGGGGGACTGGGCCGGGCTGGGCT....................................................................................................2516.006.00-------------6.00---------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCA...................................................2115.005.001.001.00---2.00-----------------------------------------------------------------------------------1.00-----------------------------------------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGC....................................................2014.004.00---------------2.00-----------1.00---1.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTG.....................................................1914.004.00-1.00------2.00------1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................GGCTCCCAGCTGACGGACCGCTCTC.........................................................2513.003.00----------------------------3.00------------------------------------------------------------------------------------------------------
................................................................................................................................................................................GCTGACGGACCGCTCTCCTTGCAG..................................................2413.003.00----------2.00-----------------------------------------------------------------------------------------1.00------------------------------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCAGTT................................................2413.0019.00-1.00--------------------1.00------------1.00-----------------------------------------------------------------------------------------------
............................................................................................................................................................................CCCAGCTGACGGACCGCTCTCC........................................................2213.003.00-------------------1.00-------------------2.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................CTGACGGACCGCTCTCCTTG.....................................................2013.003.00--------2.00---------------------------------------------1.00----------------------------------------------------------------------------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCAGTTT...............................................2512.0019.00------------1.00--------------------------------------------------------------1.00-------------------------------------------------------
..............................................................................................................................................................................CAGCTGACGGACCGCTCTCCTTG.....................................................2312.002.00-----------------------------------------------------------------------------------------------------------1.00-------1.00---------------
................TGGCGGAGGAGGCTTCCGGAAATA..................................................................................................................................................................................................................2412.002.00------2.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................TCCCAGCTGACGGACCGCTCTCCT.......................................................2412.002.00----------------1.00--------------------------------------------------------1.00---------------------------------------------------------
...........CGGGCTGGCGGAGGAGGCTT...........................................................................................................................................................................................................................2012.002.00-----------------------2.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................CAGCTGACGGACCGCTCTCCTT......................................................2212.002.00----------1.00-----1.00------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................GACGGACCGCTCTCCTTGCAGA.................................................2212.002.001.00----------------------------------------1.00-----------------------------------------------------------------------------------------
...................................................................................................................................................................................GACGGACCGCTCTCCTTGCAGT.................................................2212.002.00------------1.00----------------------------------------------------1.00-----------------------------------------------------------------
............................................................................................................................GCGGGGGGACTGGGCGGG............................................................................................................182.000.00----1.00---------------------------------------------------------------------------------------------------------------------1.00--------
.................................................................................................................................................................................CTGACGGACCGCTCTCCTTGCAGC.................................................2412.0013.00------1.00---------------1.00------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCAT..................................................2212.005.00------------2.00----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCAGAA................................................2412.0019.00---1.00--------------------------------------------------------------------------1.00----------------------------------------------------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCATT.................................................2312.005.00-----1.00---------------1.00-------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................GACGGACCGCTCTCCTTGCAG..................................................2112.002.00------------------------------------------------------------------------------------1.00----------------1.00-----------------------------
.....................................................................................................................................CTGGGCCGGGCTGGGCTGGGGGCA.............................................................................................242.000.00------------------------------------------2.00----------------------------------------------------------------------------------------
......................................................................................................GCGAGAGGCCCCAGGT....................................................................................................................................1621.501.50---------------1.50-------------------------------------------------------------------------------------------------------------------
.......................................................................................................CGAGAGGCCCCAGGT....................................................................................................................................1551.401.40---------------1.40-------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................CTCCCAGCTGACGGACCGCTCTC.........................................................2311.001.00----------------1.00------------------------------------------------------------------------------------------------------------------
.........GCCGGGCTGGCGGAGCGC...............................................................................................................................................................................................................................181.000.00-----------1.00-----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................GGCCGGGCTGGGCTGGGGGCGACG..........................................................................................241.000.00----------------------------------------------------------------------------------------1.00------------------------------------------
....................................................................................................................................................................................................................CTGTCGGGCCGTTC........................1411.001.00-----------------------------------------------------------------------------1.00-----------------------------------------------------
.......................................................................................................................................GGGCCGGGCTGGGCTGGTG................................................................................................191.000.00--------------------------1.00--------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CTGACACTGGCCTTGCG...1711.001.00--------------------------------1.00--------------------------------------------------------------------------------------------------
.............................................................TCCGTGGCACCGACAGGGACCCC......................................................................................................................................................................2311.001.00--------1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................GCACCGACAGGGACCCCAGAGCCCAGAGAGG........................................................................................................................................................3111.001.00---------------------------------------------------------1.00-------------------------------------------------------------------------
.....................................................................................................................................................................................CGGACCGCTCTCCTTGCAGA.................................................2011.001.00-----------------------------------------------------------------------------------1.00-----------------------------------------------
.....................................................................................................................................................................................CGGACCGCTCTCCTTGCAGT.................................................2011.001.00-------1.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GGGCTGGGGGCGCCGCAAGCTGGGGCTCCCAGCTGACGGACCGCTCTCCTTGCAGA.................................................561.000.00---------------------------------------------------------------------------------1.00-------------------------------------------------
.......GGGCCGGGCTGGCGGAGGAGGC.............................................................................................................................................................................................................................2211.001.00------------------------------------------------------------1.00----------------------------------------------------------------------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCCGT.................................................2311.004.00------------1.00----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CCAGCTGACGGACCGCTCTC.........................................................2011.001.00-------------------1.00---------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CTGACGGACCGCTCTCCTTGTT...................................................2211.003.00---------------------------1.00-------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................CAGCTGACGGACCGCTCTC.........................................................1911.001.00-------------------1.00---------------------------------------------------------------------------------------------------------------
.......................................................................CGACAGGGACCCCAGAGCA................................................................................................................................................................191.000.00----------------------------------------------------------------------------------1.00------------------------------------------------
..........................................................................................................................................CCGGGCTGGGCTGGG.................................................................................................1501.001.00----------------------------------------------------------------------1.00------------------------------------------------------------
..........CCGGGCTGGCGGAGGAGGCTTC..........................................................................................................................................................................................................................2211.001.00----------------------------------------------------------------------------------------------------------------------------1.00------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCAGTA................................................2411.0019.00------------------------------------------------------------------------1.00----------------------------------------------------------
...............................................................................................................................................................................AGCTGACGGACCGCTCTCCTTTCAG..................................................2511.001.00-------------------------------------------------------------------------------------------1.00---------------------------------------
.....................GAGGAGGCTTCCGGAAATACAGAT.............................................................................................................................................................................................................2411.001.00--------------------------1.00--------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CCAGCTGACGGACCGCTCT..........................................................1911.001.00------------------------------------------------------------------------------------------------------1.00----------------------------
.........................................................................................................................................GCCGGGCTGGGCTGGGGGG..............................................................................................191.000.00--------------------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CTGACGGACCGCTCTCCTTGCAGGGA...............................................261.000.00----------------1.00------------------------------------------------------------------------------------------------------------------
.......GGGCCGGGCTGGCGGAGGAGGCTTCGA........................................................................................................................................................................................................................271.000.00------------------1.00----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CGGACCGCTCTCCTTGCAG..................................................1911.001.00--------------------------------------------------------------------------------------------------------------1.00--------------------
.....................................................................................................................................CTGGGCCGGGCTGGGTCC...................................................................................................181.000.00-------------------------------------------------------------------------------------------------------------------------1.00---------
.................................................................................................................................................................................CTGACGGACCGCTCTCCGTG.....................................................201.000.00--------1.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................AGCTGACGGACCGCTCAAAA.......................................................201.000.00-------------------------------------------------------1.00---------------------------------------------------------------------------
.....CCGGGCCGGGCTGGCGGAGGAGGCTTCCGG.......................................................................................................................................................................................................................3011.001.00-------------------------------------------------------------1.00---------------------------------------------------------------------
...........................................................................................................................................................................TCCCAGCTGACGGACCGCTCTCCTTG.....................................................2611.001.00----------1.00------------------------------------------------------------------------------------------------------------------------
.........GCCGGGCTGGCGGAGCG................................................................................................................................................................................................................................171.000.00----1.00------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GCTCCCAGCTGACGGACCGCTCTCCTT......................................................2711.001.00--------------1.00--------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TGTCGGGCCGTTCGCCACTGACACTGGCCTTGC....3311.001.00-----------------------------1.00-----------------------------------------------------------------------------------------------------
..........................................................................................................................................................................CTCCCAGCTGACGGACCGCTCT..........................................................2211.001.00---1.00-------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................CGCGGGGGGACTGGGCCGGGCTGGG......................................................................................................2511.001.00-------------------------------------------------------------------------------1.00---------------------------------------------------
...............................................................................................................................................CTGGGCTGGGGGCGCCGCAAGCTGGGG................................................................................2711.001.00------------------------------------------------------------------------------------------------------------------1.00----------------
.....................................................................................................................................CTGGGCCGGGCTGGGCTGGGGG...............................................................................................2211.001.00----------------------------------1.00------------------------------------------------------------------------------------------------
........................................................................................................................................................................................ACCGCTCTCCTTGCAG..................................................1611.001.00-----------1.00-----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................TCCCAGCTGACGGACCGCTCTCCTTGA....................................................2711.001.00----------------------------------1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................CTGGGCCGGGCTGGGCTGGG.................................................................................................2021.001.00---------------------------------------------------0.50--0.50----------------------------------------------------------------------------
............GGGCTGGCGGAGGAGGCTTCCGGAAA....................................................................................................................................................................................................................2611.001.00--------------------------------------------------------------------------------------------------1.00--------------------------------
.................................................................................................................................................................................CTGACGGACCGCTCTCCTTGCAGTT................................................2511.0013.00------------------------1.00----------------------------------------------------------------------------------------------------------
................................................................................CCCCAGAGCCCAGAGAGGGGCGG...................................................................................................................................................2311.001.00--------------------------------------------------------------------1.00--------------------------------------------------------------
.......GGGCCGGGCTGGCGGAGGAGGCTT...........................................................................................................................................................................................................................2411.001.00----------------------------------------------------------------1.00------------------------------------------------------------------
..........................................................................................................................................CCGGGCTGGGCTGGGGAG..............................................................................................181.000.00------------------------------------------------------------------------------------------------------------------------1.00----------
..................................................................................................................................................................AGCTGGGGCTCCCAGCTGACGGACCG..............................................................2611.001.00----------------------------------------------------1.00------------------------------------------------------------------------------
..........................................................................................................................................CCGGGCTGGGCTGGGGAGGG............................................................................................201.000.00---------------------------------------------------------------------------------------------------------------------1.00-------------
............................................................................................................................................................................CCCAGCTGACGGACCGCTCTCCT.......................................................2311.001.00------1.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................ACGGACCGCTCTCCTTGCAG..................................................2011.001.00-----------------1.00-----------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................CAGCTGACGGACCGCTCTCCT.......................................................2111.001.001.00----------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................GCTGACGGACCGCTCTCCTTGCAGT.................................................2511.003.00----------------------------------------------------------1.00------------------------------------------------------------------------
..............................................................................................................................................................................................................GACTTCCTGTCGGGCCGTTCGAT.....................231.000.00--------------------1.00--------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCAGC.................................................2311.0019.00----------------------1.00------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CCAGCTGACGGACCGCTCTCC........................................................2111.001.00-------------------1.00---------------------------------------------------------------------------------------------------------------
..........................................GATTCATTTTATTTAAGCGT............................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------------------------1.00-----------------
.....................................................................................................................................................................................CGGACCGCTCTCCTTGCAGGTC...............................................2211.001.00-------------------------------------1.00---------------------------------------------------------------------------------------------
........................................................................................................................................GGCCGGGCTGGGCTGGGGGC..............................................................................................2011.001.00----------------------------------------------------------------------------------------------------------1.00------------------------
.......................................................................................................................................GGGCCGGGCTGGGCTGGAGA...............................................................................................201.000.00----------------------------------------------------------------------------------------------------------------1.00------------------
.........................................................................................................................................GCCGGGCTGGGCTGGAAT...............................................................................................181.000.00------------------------------------------------------------------------------------------1.00----------------------------------------
....GCCGGGCCGGGCTGGCCTGC..................................................................................................................................................................................................................................201.000.00--------------------------------------------------------------------------------1.00--------------------------------------------------
...........................................................................................................................................................................................................AGTGACTTCCTGTCGGGGC............................191.000.00---------------------------------------------------------------------1.00-------------------------------------------------------------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCAGAT................................................2411.0019.001.00----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCAGG.................................................2311.001.00-------1.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CTGACGGACCGCTCTC.........................................................1611.001.00-----------------------------------------------------1.00-----------------------------------------------------------------------------
...............................................................................................................................................................................AGCTGACGGACCGCTCTCCTT......................................................2111.001.001.00----------------------------------------------------------------------------------------------------------------------------------
........................................................................................CCCAGAGAGGGGCGGCGAGAGGCCCCA.......................................................................................................................................2711.001.00-----------------------------1.00-----------------------------------------------------------------------------------------------------
.....CCGGGCCGGGCTGGCGGAGGAGGC.............................................................................................................................................................................................................................2411.001.00--------------------------------------------------------------------------------------------------------1.00--------------------------
..................................................................................CCAGAGCCCAGAGAGGGGCGGC..................................................................................................................................................2211.001.00---------------------------------------------------1.00-------------------------------------------------------------------------------
.............................................................................................................................................................................CCAGCTGACGGACCGCTCTCCT.......................................................2211.001.00-------------------------------------------------------------------1.00---------------------------------------------------------------
...............................................................................................................................................................................................................ACTTCCTGTCGGGCC............................1520.500.50---------------------0.50-------------------------------------------------------------------------------------------------------------
................................CGGAAATACAGATTCATT........................................................................................................................................................................................................1820.500.50------------------------------------------------------------------------------------------------------------------------------0.50----
........GGCCGGGCTGGCGGAGGAG...............................................................................................................................................................................................................................1920.500.50----------------------------------------------------0.50------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................ACTGACACTGGCCTTGC....1720.500.50--------------------------------------------------0.50--------------------------------------------------------------------------------
..........CCGGGCTGGCGGAGGAG...............................................................................................................................................................................................................................1730.330.33-----------------------------------------------------------------------------------------------------------------------------0.33-----
..........................................................................................................................................................................CTCCCAGCTGACGGA.................................................................1540.250.25-------------------------------------------------------------------------------------------------------------------------------0.25---
.....................................................................................................................................................................................CGGACCGCTCTCC........................................................1350.200.20--------------------------------------------------------------------------------------------------------------------------------0.20--
...........CGGGCTGGCGGAGGA................................................................................................................................................................................................................................1560.170.17---------------------------------------------------------------------------------------------------------------------------------0.17-
..............GCTGGCGGAGGAGGC.............................................................................................................................................................................................................................1590.110.11----------------------------------------------------------------------------------------------------------------------------------0.11

Antisense strand
CCGGGCCGGGCCGGGCTGGCGGAGGAGGCTTCCGGAAATACAGATTCATTTTATTTAAGCGTCCGTGGCACCGACAGGGACCCCAGAGCCCAGAGAGGGGCGGCGAGAGGCCCCAGGTCACAGCGCGGGGGGACTGGGCCGGGCTGGGCTGGGGGCGCCGCAAGCTGGGGCTCCCAGCTGACGGACCGCTCTCCTTGCAGGTCAGTGACTTCCTGTCGGGCCGTTCGCCACTGACACTGGCCTTGCGTGT
............................................................................................................................(((((((((.(((.(((.....((((((((((.(((.....))).))))))))))..))).))).)))))))))....................................................
.......................................................................................................................120.............................................................................200................................................
SizePerfect hitTotal NormPerfect NormGSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189782DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR189783SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR189786SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR038856(GSM458539)
D11. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR038855(GSM458538)
D10. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105751AGO4(GSM1105751)
small RNA sequencing data. (ago4 hela)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR189784SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577453(Rovira)
total RNA. (breast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038853(GSM458536)
MELB. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR038858(GSM458541)
MEL202. (cell line)		GSM956925F181A(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR040029(GSM532914)
G026T. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577739(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191522(GSM715632)
93genomic small RNA (size selected RNA from t. (breast)		TAX577742(Rovira)
total RNA. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................................................................................................................................................................TGACGGACCGCTCTCCTTGCAG.................................................. 2212.002.00------------------------------------------------2.00----------------------------------------------------------------------------------
.................................................................................................................................................................................CTGACGGACCGCTCTCCTTG..................................................... 2011.001.00----------------------------------------------------------------------------------------------------------------------1.00------------
..................................................................................CCAGAGCCCAGAGAGGGTA..................................................................................................................................................... 191.000.00-----------------------1.00-----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................ACCGCTCTCCTTGCAGGTCA.............................................. 2011.001.00--------------------------------------------------1.00--------------------------------------------------------------------------------
............................................................................................................................................................................................CTCTCCTTGCAGGTCAGT............................................ 1811.001.00--------------------------------------------------------------1.00--------------------------------------------------------------------
..............................................................................................................................GGGGGGACTGGGCCGGGCCGG....................................................................................................... 211.000.00--------------------------------------------1.00--------------------------------------------------------------------------------------
..........................................................................................................................................................................CTCCCAGCTGACGGACCG.............................................................. 1811.001.00----------------------------------------------------------------------------1.00------------------------------------------------------
...............................................................................................................CCCAGGTCACAGCGCGT.......................................................................................................................... 171.000.00--------------------1.00--------------------------------------------------------------------------------------------------------------
..............................................................CCGTGGCACCGACAG............................................................................................................................................................................. 1520.500.50-----------------------------------------------------0.50-----------------------------------------------------------------------------
............................................................................................................................................................................................................................CCGTTCGCCACT.................. 1250.200.20-----------------------------------------------------------------------------------------------------------------------------0.20-----
...........................................................................................................................................................................................................................GCCGTTCGCCAC................... 1280.120.12---------------------------------0.12-------------------------------------------------------------------------------------------------