ID: uc002lrj.25
GENE: SBNO2(25)
chr19:1123589-1123990-


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(4)
AGO2.ip
(4)
B-CELL
(2)
BRAIN
(14)
BREAST
(30)
CELL-LINE
(5)
CERVIX
(1)
FIBROBLAST
(8)
HEART
(5)
HELA
(6)
LIVER
(2)
OTHER
(1)
RRP40.ip
(36)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
TCGAGGACTTTCTGCCCTCCCACAGCACCCCGCTTCTCGTCAGCTACCAGGTGAGCTGGGCCCAGCCGAGAGCTCCCTCCCCTGCCCTCTCATGGGACCTAAGGAGAGGGCTCAGCACAGGCATCTCCATTGTGGGGAGCGCTTGGCTGGCCTAGAAGCTGGGAGTGCCCATTTTATAGCTGAGGAGATGGAGGCCCTGGGGGAGCACCTTGCTGCAGGGGCAGACAGAGCCGTCTCCCACCCCTGGGTCACTCAGCTGCCCATGGTCAGCCTGGCCCCTGCCCCTGGGGGAGCCCAGTGCCCGCGGCCGCTCAGGCCTGCAGTCTCCGCTGAGCTCCCGCCACGCACGCAGGAGCAGAGTGTGCAGAGCCAGCCAGAGGAGGAGGACGAGGCTGAGGAGGA
....................................................................................................................................................................................................................................................................................................((...((((..((((..((((((..............))))))..))))...))))))....................................................
..................................................................................................................................................................................................................................................................................................291..........................................................352................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR038863(GSM458546)
MM603. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR189786SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040043(GSM532928)
G428T. (cervix)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040019(GSM532904)
G701T. (cervix)
TAX577743(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR038860(GSM458543)
MM426. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
TAX577739(Rovira)
total RNA. (breast)
SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCAG..................................................221131.00131.0025.007.003.00--3.004.00-3.00-1.00-3.003.004.003.002.003.003.002.00-2.003.00-3.002.00-2.00-1.00-1.001.00-1.00-2.00-1.002.00-2.002.002.002.001.001.002.00--1.00-1.00--1.001.001.001.00-1.00--1.00-----1.001.00-1.00-1.00-1.00-1.00-1.00--1.001.00---1.001.001.001.00-1.00--1.00---1.00--1.00-1.001.00-1.00-1.00------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCAGT.................................................23129.00131.006.002.00-8.00---2.00--1.00--2.00------1.00------------------------------2.00-------1.00-1.00-----1.00-------1.00-----------------------1.00-----------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCAGA.................................................23118.00131.00--1.00-----1.00-----1.00--1.001.002.001.00--------1.001.00--1.00---1.00--1.00-----1.00-1.00--------1.00-------------------------------------1.00------1.00--------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCAT..................................................22112.007.00--1.00----2.00--2.00-------------------2.00-------------------1.00--------------------1.00-----1.00----1.00--------------1.00-------------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGC....................................................2019.009.00-2.001.00---1.00-1.00-------------------1.001.00-------------------------------------------------1.00------------------1.00------------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCA...................................................2117.007.00--1.00---1.00------------------1.00----------------------1.00-----------------1.00------1.00---------------------------------1.00---------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCAGATC...............................................2517.00131.00----7.00----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................AGAGGAGGAGGACGACATA........196.000.00---------2.00-4.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACG.....................................................1914.004.00----------------------------1.00------------------------2.00--------------------------------------1.00------------------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCT...................................................2112.009.00----------------------------1.00--1.00-------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGCCAGCCAGAGGAGGAGGACGAGGCT........2712.002.00-----------------------2.00---------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCCGT.................................................2312.009.00--------------------1.00-----------------------------------1.00------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCTTT.................................................2312.009.00-2.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................AGTGCCCGCGGCCGCTCAGG......................................................................................2012.002.00--------1.00------------------------------------1.00-----------------------------------------------------------------------
...............................................................................................................................................................................................AGGCCCTGGGGGAGCGC..................................................................................................................................................................................................172.000.00-----2.00---------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCAA..................................................2212.007.00-------------------------------1.00-----1.00-------------------------------------------------------------------------------
.......................................TCAGCTACCAGGTGATCG.........................................................................................................................................................................................................................................................................................................................................................182.000.00--------------------------2.00------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCTT..................................................2211.009.00------1.00--------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................AGGCCCTGGGGGAGCGG..................................................................................................................................................................................................171.000.00----------------1.00----------------------------------------------------------------------------------------------------
......................................................................................................................................................CCTAGAAGCTGGGAGTATAG........................................................................................................................................................................................................................................201.000.00------------------------------------------------------1.00--------------------------------------------------------------
........TTTCTGCCCTCCCACGCTC.......................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------------------------------1.00--------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCCG..................................................2211.009.00---------------------1.00-----------------------------------------------------------------------------------------------
.........................CACCCCGCTTCTCGTCAGCTACCAGG...............................................................................................................................................................................................................................................................................................................................................................2611.001.00----------------------------------------------------1.00----------------------------------------------------------------
............................................................................................TGGGACCTAAGGAGAGGCTAC.................................................................................................................................................................................................................................................................................................211.000.00-----------------------------------------------------------------1.00---------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGGACGAGTTT........181.000.00----------------------------------------------------------------------------------------------1.00----------------------
.....................................................................................................................................................................................................TGGGGGAGCACCTTGTGCG..........................................................................................................................................................................................191.000.00--------------------------------------1.00------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGGACGAGATA........181.000.00-----------------------1.00---------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGGACGAGGTGAT......201.000.00-------------------------------------------------------------------------------------1.00-------------------------------
......ACTTTCTGCCCTCCCACAGCACCCCGCTTCCG............................................................................................................................................................................................................................................................................................................................................................................321.000.00--------------------------1.00------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCATC.................................................2311.007.00----1.00----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................GTCTCCGCTGAGCTCCCGCCACGCACG.....................................................2711.001.00-------1.00-------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCATGT....................................................201.000.00----------------------------------------------------------------------------------------------------------------1.00----
.....................................................................................................................................................................................................................................................................................................CCCAGTGCCCGCGGCCGCTCAGG......................................................................................2311.001.00---------------------------1.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................GGAGGACGAGGCTGACAC...181.000.00----------1.00----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................GGAGCAGAGTGTGCAGAGCCAGCCAGAGG......................2911.001.00-------------------------------------------------------1.00-------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................AGTGCCCGCGGCCGCTCAGGTAG...................................................................................2311.002.00-------1.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................AGTGCCCGCGGCCGCTCAGGC.....................................................................................2111.001.00--1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TGGGGAGCGCTTGGCTGGCCTAGA......................................................................................................................................................................................................................................................2411.001.00----------------1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGCCAGCCAGAGGAGGAGGACG.............2211.001.00-------------------------------------------------1.00-------------------------------------------------------------------
...............................................................................................................................................................................................AGGCCCTGGGGGAGCGT..................................................................................................................................................................................................171.000.00-----1.00---------------------------------------------------------------------------------------------------------------
..........TCTGCCCTCCCACAGCACCCCGC.................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-------------------------------------------------1.00-------------------------------------------------------------------
......................................................................................................................................................................................................GGGGGAGCACCTTGCTGCAGGGGCA...................................................................................................................................................................................2511.001.00---------------------------------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................CTGAGCTCCCGCCACGCACG.....................................................2011.001.00--------------------------------------------------------------1.00------------------------------------------------------
.......................................................................................................GAGAGGGCTCAGCACAGGCA.......................................................................................................................................................................................................................................................................................2011.001.00---------------1.00-----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................AGGCCCTGGGGGAGCG...................................................................................................................................................................................................161.000.00-----1.00---------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................TCTCCGCTGAGCTCCCGCCACGCACGCAG..................................................2911.001.00------------1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................TGGGGGAGCACCTTGTTG...........................................................................................................................................................................................181.000.00--------------------------------------------------------------------------------------------------------1.00------------
.......................................................................................................................................................................................................................................................................................................CAGTGCCCGCGGCCGCTCAGGT.....................................................................................221.000.00--1.00------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................AGGAGCAGAGTGTGCAGAGCC...............................2111.001.00---------1.00-----------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCAGG.................................................2311.001.00---1.00-----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................CGCTGAGCTCCCGCCACGCACGCAGA.................................................261.000.00-------1.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................CTGAGCTCCCGCCACGCACGCAG..................................................2311.001.00-------------------------------------------------------------------------------------------------------------1.00-------
...................................................................................................................................................................................................................................................................................................................................TCTCCGCTGAGCTCCCG..............................................................1711.001.00-----------------------------------------------------------------------------------------------------1.00---------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCACGCG...................................................2111.009.00----------1.00----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................ATAGCTGAGGAGATGGAG.................................................................................................................................................................................................................1811.001.00---------------------------------------------------------------------------------------------------------------1.00-----
......................................................................................................................................................................................................................................................................................................................................................................................CAGAGGAGGAGGACGACATA........201.000.00---------1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................GGAGGACGAGGCTGAGGATT.201.000.00----------------------------------------1.00----------------------------------------------------------------------------
............TGCCCTCCCACAGCACCC....................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------1.00----------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................AGAGGAGGAGGACGAGGCT........1911.001.00---------1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................AGGAGCAGAGTGTGCAGAGCCA..............................2211.001.00---------1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................AGGAGCAGAGTGTGCAGAGCCAGCC...........................2511.001.00-----------1.00---------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................CCGCTGAGCTCCCGCTGAC.........................................................191.000.00--------------------------------1.00------------------------------------------------------------------------------------
..........................................................................................................................................GCGCTTGGCTGGCCTAGAAGCTGGGA..............................................................................................................................................................................................................................................2611.001.00------------1.00--------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................TGAGCTCCCGCCACGCAT......................................................181.000.00--------------------------------------------------------------------1.00------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................AGGACGAGGCTGAGGAACCC2021.000.50---------------------------------------------------------------------------------------1.00-----------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................AGGACGAGGCTGAGGA...1620.500.50-----------------------------------------------------------------------------------------------------------------0.50---
........................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGGACGAGGCTG.......1920.500.50------------------------------------------------------------------------------------------------------------------0.50--
...................................................................................................................................................................................CTGAGGAGATGGAGGCC..............................................................................................................................................................................................................1730.330.33-----------------------------------------------------------------------------------------------------------------0.33---
.................................................................................................................................................................................AGCTGAGGAGATGGAGG................................................................................................................................................................................................................1750.200.20-----------------------------------0.20---------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................CCCAGTGCCCGCGGC..............................................................................................1550.200.20--0.20------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................AGGACGAGGCTGAGG....1590.110.11---------------------------------0.11-----------------------------------------------------------------------------------
............................................................................................TGGGACCTAAGGAGA.......................................................................................................................................................................................................................................................................................................1590.110.11--------------------------------------------------------------------------------------------------------------------0.11
....GGACTTTCTGCCCTC...............................................................................................................................................................................................................................................................................................................................................................................................1590.110.11----------------------------------------------------------0.11----------------------------------------------------------

Antisense strand
TCGAGGACTTTCTGCCCTCCCACAGCACCCCGCTTCTCGTCAGCTACCAGGTGAGCTGGGCCCAGCCGAGAGCTCCCTCCCCTGCCCTCTCATGGGACCTAAGGAGAGGGCTCAGCACAGGCATCTCCATTGTGGGGAGCGCTTGGCTGGCCTAGAAGCTGGGAGTGCCCATTTTATAGCTGAGGAGATGGAGGCCCTGGGGGAGCACCTTGCTGCAGGGGCAGACAGAGCCGTCTCCCACCCCTGGGTCACTCAGCTGCCCATGGTCAGCCTGGCCCCTGCCCCTGGGGGAGCCCAGTGCCCGCGGCCGCTCAGGCCTGCAGTCTCCGCTGAGCTCCCGCCACGCACGCAGGAGCAGAGTGTGCAGAGCCAGCCAGAGGAGGAGGACGAGGCTGAGGAGGA
....................................................................................................................................................................................................................................................................................................((...((((..((((..((((((..............))))))..))))...))))))....................................................
..................................................................................................................................................................................................................................................................................................291..........................................................352................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR038863(GSM458546)
MM603. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR189786SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040043(GSM532928)
G428T. (cervix)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040019(GSM532904)
G701T. (cervix)
TAX577743(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR038860(GSM458543)
MM426. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
TAX577739(Rovira)
total RNA. (breast)
SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............................................................................................................................................................................................GGAGGCCCTGGGGGAGCGATT................................................................................................................................................................................................ 211.000.00---------------1.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................AGCCAGAGGAGGAGGACGACCAG........ 231.000.00-----------------------------------1.00---------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................CCTGCAGTCTCCGCTTGAA................................................................... 191.000.00--------------------------------------------------------------------------------------1.00------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................GAGCCAGCCAGAGGAGCCA................. 191.000.00---------------------------------------------------------------------------------1.00-----------------------------------
...........................................................................................................................................................................................................................................................................................................................GCCTGCAGTCTCCGCGCTG.................................................................... 191.000.00-----------------------------------1.00---------------------------------------------------------------------------------
........TTTCTGCCCTCCCACTAC........................................................................................................................................................................................................................................................................................................................................................................................ 181.000.00----------------------------------------------------------------1.00----------------------------------------------------
.....................................................................................................................................................................................................................................GCCGTCTCCCACCCCTGGG.......................................................................................................................................................... 1920.500.50--------------------------------0.50------------------------------------------------------------------------------------
............................................................................................................GGCTCAGCACAGGCATC..................................................................................................................................................................................................................................................................................... 1750.400.40-------------------------------------------------------------------------------------------------------------------0.40-
.......................................................................................................................................................................................................................................................................................................CAGTGCCCGCGGCCGC........................................................................................... 1630.330.33---------------------------------0.33-----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................GCCGTCTCCCACCCCTGG........................................................................................................................................................... 1830.330.33----------------------------------0.33----------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................CAGTCTCCGCTGAG.................................................................... 1440.250.25--------------------0.25------------------------------------------------------------------------------------------------