ID: uc002juj.1
GENE: TMC6(1)
chr17:76122680-76122907-


(3)
AGO2.ip
(1)
AGO3.ip
(18)
B-CELL
(2)
BRAIN
(8)
BREAST
(15)
CELL-LINE
(3)
HELA
(2)
OTHER
(4)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
CAGCCACTGGCCTTCATCCTCGATGTCCCTGAGACCCCAGGGGACCAGGGGTAAGCGCTCTGGGGCTGGGGGCTGGAGGCTGGAATGTTCCACCCCCCACGGAGAGGTCACCTGAGCAGGGGCTGCTGGAAGGAGAGAGGTGGCTGGAGCCTGACCCCCCCGCCAACCCCCTCTGCAGCCAGGGCCCCAGCCCCTATGATGAAAGCGAAGTGCACGACTCCTTCCAGC
...................................................................................................................(((((((....(((..((.....((((((....)))..)))..))..)))....)))))))....................................................
.............................................................................................................110.................................................................178................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR038859(GSM458542)
MM386. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR189784SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189782SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR189787SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
TAX577745(Rovira)
total RNA. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR038858(GSM458541)
MEL202. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
TAX577741(Rovira)
total RNA. (breast)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR038857(GSM458540)
D20. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR343337
..................................................................................................................AGCAGGGGCTGCTGGAAGGAGA............................................................................................22124.0024.005.00-3.002.002.001.00-1.001.00---2.00-----1.001.00----1.00--------1.00---------------1.001.00----1.00---
..................................................................................................................AGCAGGGGCTGCTGGAAGGAGAG...........................................................................................23118.0018.002.005.00-1.001.002.00----1.00---1.00-2.00-1.00-------1.00--------------------------1.00-----
.............................................................................................................................................................CCCCGCCAACCCCCTCTGCAGT.................................................22111.003.009.00-------1.00-------------1.00------------------------------------
................................................................................................................TGAGCAGGGGCTGCTGGAAGGAGA............................................................................................2419.009.00-8.001.00--------------------------------------------------------
..................................................................................................................AGCAGGGGCTGCTGGAAGGAG.............................................................................................2118.008.001.00-2.00-----1.00-------------------------1.00---------1.00--1.00----1.00------
..................................................................................................................AGCAGGGGCTGCTGGAAGGAGAA...........................................................................................2318.0024.00---4.004.00------------------------------------------------------
.................................................................................................................GAGCAGGGGCTGCTGGAAGGAG.............................................................................................2217.007.00-7.00---------------------------------------------------------
.................................................................................................................GAGCAGGGGCTGCTGGAAGGAGA............................................................................................2316.006.004.00------------1.00-----------------1.00---------------------------
.............................................................................................................................................................CCCCGCCAACCCCCTCTGCAGA.................................................2214.003.003.00--------------------------1.00-------------------------------
..................................................................................................................AGCAGGGGCTGCTGGAAGGAGATT..........................................................................................2413.0024.00------1.00-------1.00---------------------------------1.00----------
.............................................................................................................................................................CCCCGCCAACCCCCTCTGCAG..................................................2113.003.00-----------1.00-----------------------1.00----1.00------------------
..................................................................................................................AGCAGGGGCTGCTGGAAGGAA.............................................................................................2112.002.00-------------------------1.00-----------1.00---------------------
.....................................................................................................................................AGAGAGGTGGCTGGAGTA.............................................................................182.000.00------2.00----------------------------------------------------
..................................................GTAAGCGCTCTGGGGCTGGGGGC...........................................................................................................................................................2312.002.00---------2.00-------------------------------------------------
..................................................................................................................AGCAGGGGCTGCTGGAAGGA..............................................................................................2012.002.001.00------1.00---------------------------------------------------
..................................................................................................................AGCAGGGGCTGCTGGAAGGAGAT...........................................................................................2312.0024.00--1.00---------------------------------------1.00----------------
..................................................................................................................AGCAGGGGCTGCTGGAAGGAGT............................................................................................2211.008.00-----------------------1.00-----------------------------------
..................................................................................................................AGCAGGGGCTGCTGGAAGGAGAGA..........................................................................................2411.001.00------------------------------1.00----------------------------
............................................................................................................................................................CCCCCGCCAACCCCCTCTGCAGT.................................................2311.001.00--------------------1.00--------------------------------------
.........................TCCCTGAGACCCCAGGACCT.......................................................................................................................................................................................201.000.00--------------------------------1.00--------------------------
...................................................................GGGGGCTGGAGGCTGACT...............................................................................................................................................181.000.00-------------------------------------------1.00---------------
..................................................................................................................AGCAGGGGCTGCTGGAAGGGGA............................................................................................221.000.00-----------------1.00-----------------------------------------
...............ATCCTCGATGTCCCTGAGA..................................................................................................................................................................................................1911.001.00------------------------------------1.00----------------------
......................................................GCGCTCTGGGGCTGGGGGCTGGA.......................................................................................................................................................2311.001.00---------------------1.00-------------------------------------
............................................................................................................................................................CCCCCGCCAACCCCCTCTGCAG..................................................2211.001.00-----------1.00-----------------------------------------------
.............................................................................................................................................................CCCCGCCAACCCCCTCTGCAGATC...............................................2411.003.00--------------------------------------1.00--------------------
..................................................................................................................AGCAGGGGCTGCTGGAAGGAGGTT..........................................................................................2411.008.00----------1.00------------------------------------------------
..............................................................................................................CCTGAGCAGGGGCTGCTGGAA.................................................................................................2111.001.00---------1.00-------------------------------------------------
.....................................................................................................................................AGAGAGGTGGCTGGAGCTTT...........................................................................201.000.00--1.00--------------------------------------------------------
.........................TCCCTGAGACCCCAGGGA.........................................................................................................................................................................................181.000.00-----------------------------1.00-----------------------------
..........................................................................................................................CTGCTGGAAGGAGAGAGGTGGCTGG.................................................................................2511.001.00-------1.00---------------------------------------------------
.................................................................................................................GAGCAGGGGCTGCTGGAAGGAGAG...........................................................................................2411.001.00-------------1.00---------------------------------------------
..................................................................................................................AGCAGGGGCTGCTGGAAGGAAA............................................................................................2211.002.00---------------------------------------------1.00-------------
.........................TCCCTGAGACCCCAGGAATT.......................................................................................................................................................................................201.000.00---------------------------------------------------1.00-------
.........................TCCCTGAGACCCCAGGGTGC.......................................................................................................................................................................................201.000.00-----------------1.00-----------------------------------------
.................................ACCCCAGGGGACCAGGG..................................................................................................................................................................................1711.001.00-----------------------------------------1.00-----------------
..................................................................................................................AGCAGGGGCTGCTGGAAGGTGAT...........................................................................................231.000.00----------1.00------------------------------------------------
..................................................................................................................AGCAGGGGCTGCTGGAAGGAGAAA..........................................................................................2411.0024.00------------------------------------------------------1.00----
.........................TCCCTGAGACCCCAGTGA.........................................................................................................................................................................................181.000.00---------------1.00-------------------------------------------
........................................................................................................................................................GACCCCCCCGCCAACATAT.........................................................191.000.00---------------1.00-------------------------------------------
..............................................................................................................................................................................................CCCCTATGATGAAAGC......................1620.500.50---------------------------------------------------------0.50-

Antisense strand
CAGCCACTGGCCTTCATCCTCGATGTCCCTGAGACCCCAGGGGACCAGGGGTAAGCGCTCTGGGGCTGGGGGCTGGAGGCTGGAATGTTCCACCCCCCACGGAGAGGTCACCTGAGCAGGGGCTGCTGGAAGGAGAGAGGTGGCTGGAGCCTGACCCCCCCGCCAACCCCCTCTGCAGCCAGGGCCCCAGCCCCTATGATGAAAGCGAAGTGCACGACTCCTTCCAGC
...................................................................................................................(((((((....(((..((.....((((((....)))..)))..))..)))....)))))))....................................................
.............................................................................................................110.................................................................178................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR038859(GSM458542)
MM386. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR189784SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189782SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR189787SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
TAX577745(Rovira)
total RNA. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR038858(GSM458541)
MEL202. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
TAX577741(Rovira)
total RNA. (breast)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR038857(GSM458540)
D20. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR343337
.................................................................................................................................................................GCCAACCCCCTCTGCAGCCAGG............................................. 2211.001.00--------------------------------------------------------1.00--
......................................................................................GTTCCACCCCCCACGTCTG........................................................................................................................... 191.000.00---------------------------------------1.00-------------------
............................................................................................................................................................CCCCCGCCAACCCCCTGAA..................................................... 191.000.00----------------------------1.00------------------------------
.....................................................................................................................................................CCTGACCCCCCCGCCAGG............................................................. 181.000.00----------------------------------------------1.00------------
.............................................................................................................................CTGGAAGGAGAGAGGT....................................................................................... 1670.140.14----------------------------------------------------------0.14