ID: uc002ivw.2
GENE: BZRAP1(1)
chr17:56382483-56382797-


(2)
AGO2.ip 		(5)
B-CELL 		(8)
BRAIN 		(2)
BREAST 		(8)
CELL-LINE 		(1)
FIBROBLAST 		(1)
HEART 		(1)
LIVER 		(1)
OTHER 		(4)
SKIN

Sense strand
GGGATGTCATTACTGTGTTTGGGGGCATGGACGATGACGGTTTCTACTATGTGAGAACATTGTTGGGGAGGGTGTACCATATCCCAGCCCCCCAGACTTCGGACAGGGGGATAGGCAAGGAACCCTCAGGAAGTCCGGAGGAATGGAACGGGTCACCTCCCTGGACAGTGGTTTTGGCCCCAGCTGTTCCCCAGGGGCATCAGAGTCGAGGGGCAGGGCCAGAGCCTCTTTCCTGATCTCAGTCTCACCGGCCTCTTCTCTCCAGGGGGAATTAAATGGACAAAGGGGCCTGGTTCCATCCAACTTCCTGGAGGG
..........................................................................................................................................................................................................(((..(((((((.((((....)))).....(((....)))........)))))))..))).....................................................
........................................................................................................................................................................................................201.............................................................265................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
....................................................................................................................................................................................................................................................TCACCGGCCTCTTCTCTCCAGT.................................................22122.001.0017.00---1.001.00-1.00--1.00----------------1.00----
..................................................................................................................................................................................................................................................TCTCACCGGCCTCTTCTCTCCAGT.................................................24112.0011.0012.00-------------------------------
..................................................................................................................................................................................................................................................TCTCACCGGCCTCTTCTCTCCAG..................................................23111.0011.0010.00------------1.00------------------
...................................................................................................................................................................................................................................................CTCACCGGCCTCTTCTCTCCAGT.................................................2318.003.007.00----------1.00--------------------
.............................................................................................................................................................................................................TCGAGGGGCAGGGCCAGAGC..........................................................................................2016.006.006.00-------------------------------
.........................CATGGACGATGACGGTT.................................................................................................................................................................................................................................................................................1715.005.00-2.00-2.00------------------1.00---------
...................................................................................................................................................................................................................................................CTCACCGGCCTCTTCTCTCCAGA.................................................2315.003.005.00-------------------------------
..................................................................................................................................................................................................................................................TCTCACCGGCCTCTTCTCTCC....................................................2114.004.002.00--------1.00---------------1.00------
...................................................................................................................................................................................................................................................CTCACCGGCCTCTTCTCTCCAGAA................................................2414.003.004.00-------------------------------
....................................................................................................................................................................................................................................................TCACCGGCCTCTTCTCTCCAGA.................................................2214.001.004.00-------------------------------
.........................CATGGACGATGACGGTTTCT..............................................................................................................................................................................................................................................................................2013.003.00-3.00------------------------------
...................................................................................................................................................................................................................................................CTCACCGGCCTCTTCTCTCCAG..................................................2213.003.003.00-------------------------------
..................................................................................................................................................................................................................................................TCTCACCGGCCTCTTCTCTCCATT.................................................2413.002.003.00-------------------------------
..................................................................................................................................................................................................................................................TCTCACCGGCCTCTTCTCTCCA...................................................2212.002.00----------------1.00----1.00----------
..................................................................................................................................................................................................................................................TCTCACCGGCCTCTTCTCTCCAGA.................................................2412.0011.002.00-------------------------------
.......................GGCATGGACGATGACGGAAAA...............................................................................................................................................................................................................................................................................211.000.00-----------------1.00--------------
.........................................................................................................................................................................................................AGAGTCGAGGGGCAGGGCCAGAG...........................................................................................2311.001.001.00-------------------------------
...................................................................................................................................................................................................................................................CTCACCGGCCTCTTCTCTC.....................................................1911.001.00--------------------------1.00-----
.............................................................GTTGGGGAGGGTGTACC.............................................................................................................................................................................................................................................1711.001.00------------------------1.00-------
...................TGGGGGCATGGACGATGACG....................................................................................................................................................................................................................................................................................2011.001.00--------------------1.00-----------
....................................................................................................................................................................................................................................................TCACCGGCCTCTTCTCTCCAG..................................................2111.001.001.00-------------------------------
..................TTGGGGGCATGGACGATGACGGTC.................................................................................................................................................................................................................................................................................241.000.00-------1.00------------------------
..................................................................................................TCGGACAGGGGGATAGGCA......................................................................................................................................................................................................1911.001.00---------1.00----------------------
..................................................................................................................................................................................................................................................TCTCACCGGCCTCTTCTCTC.....................................................2011.001.00--------1.00-----------------------
..................................................................................................................................................................................................................................................TCTCACCGGCCTCTTCTCTCCAT..................................................2311.002.00------------------1.00-------------
....................................................................................................................................................................................................................................................................................TGGACAAAGGGGCCTGGTT....................1911.001.00---1.00----------------------------
......................................................................................GCCCCCCAGACTTCGGACA..................................................................................................................................................................................................................1911.001.00--------1.00-----------------------
.........................CATGGACGATGACGGTTTCTACTAT.........................................................................................................................................................................................................................................................................2511.001.00--------------1.00-----------------
.......................GGCATGGACGATGACGGT..................................................................................................................................................................................................................................................................................1811.001.00--1.00-----------------------------
........................GCATGGACGATGACGGTTTC...............................................................................................................................................................................................................................................................................2011.001.00--1.00-----------------------------
..................................................................................................TCGGACAGGGGGATAGGC.......................................................................................................................................................................................................1811.001.00------------1.00-------------------
.........................CATGGACGATGACGGTTT................................................................................................................................................................................................................................................................................1811.001.00--1.00-----------------------------
........................GCATGGACGATGACGGTA.................................................................................................................................................................................................................................................................................181.000.00---------------1.00----------------
........................GCATGGACGATGACGGTTTCTAC............................................................................................................................................................................................................................................................................2311.001.00----1.00---------------------------
..................................................................................................................................................................................................................................................TCTCACCGGCCTCTTCTCTCCAAT.................................................2411.002.001.00-------------------------------
............................................................................................CAGACTTCGGACAGGGGGATAGGCAAGGAAC................................................................................................................................................................................................3111.001.00---1.00----------------------------
.................TTTGGGGGCATGGACGATGACGGT..................................................................................................................................................................................................................................................................................2411.001.00-1.00------------------------------
........................GCATGGACGATGACGGTTT................................................................................................................................................................................................................................................................................1911.001.00--1.00-----------------------------
..................................................................................................................................................................................................................................................TCTCACCGGCCTCTTCTCT......................................................1911.001.00----1.00---------------------------
....................................................................................................................................................................................................................................................TCACCGGCCTCTTCTCTCC....................................................1911.001.00-----1.00--------------------------
....................................................................................................................................................................................................................................................TCACCGGCCTCTTCTCTCCATT.................................................221.000.00------1.00-------------------------
.............................................................................................AGACTTCGGACAGGGGGATAGG........................................................................................................................................................................................................2211.001.00---1.00----------------------------
.................................................................................................TTCGGACAGGGGGATAGGCA......................................................................................................................................................................................................2011.001.00--1.00-----------------------------
...................TGGGGGCATGGACGATGACGGTTT................................................................................................................................................................................................................................................................................2411.001.00--1.00-----------------------------
.........................CATGGACGATGACGGGTTC...............................................................................................................................................................................................................................................................................191.000.00-1.00------------------------------
..................................................................................................................................................................................................................................................TCTCACCGGCCTCTTCT........................................................1720.500.50------------------------------0.50-
.......................GGCATGGACGATGA......................................................................................................................................................................................................................................................................................1420.500.50-----------------------------0.50--
..............................ACGATGACGGTTT................................................................................................................................................................................................................................................................................1340.250.25-------------------------------0.25

Antisense strand
GGGATGTCATTACTGTGTTTGGGGGCATGGACGATGACGGTTTCTACTATGTGAGAACATTGTTGGGGAGGGTGTACCATATCCCAGCCCCCCAGACTTCGGACAGGGGGATAGGCAAGGAACCCTCAGGAAGTCCGGAGGAATGGAACGGGTCACCTCCCTGGACAGTGGTTTTGGCCCCAGCTGTTCCCCAGGGGCATCAGAGTCGAGGGGCAGGGCCAGAGCCTCTTTCCTGATCTCAGTCTCACCGGCCTCTTCTCTCCAGGGGGAATTAAATGGACAAAGGGGCCTGGTTCCATCCAACTTCCTGGAGGG
..........................................................................................................................................................................................................(((..(((((((.((((....)))).....(((....)))........)))))))..))).....................................................
........................................................................................................................................................................................................201.............................................................265................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
..............................................................................ATATCCCAGCCCCCCATAG.......................................................................................................................................................................................................................... 191.000.00------1.00-------------------------
..............................................................................................................................................................................................................................................................................................GGCCTGGTTCCATCCAACTTCTCT..... 241.000.00-----------------------1.00--------
............................................................................................................................................................................................................................................................CTCTTCTCTCCAGGGTCCC............................................ 191.000.00----------------------------1.00---
................................................................................................................................................................................................................................................................TCTCTCCAGGGGGAATCCGC....................................... 201.000.00-------------------1.00------------