ID: uc002gsp.9
GENE: LLGL1(9)
chr17:18138577-18138833+


(1)
AGO1.ip 		(2)
AGO2.ip 		(2)
B-CELL 		(5)
BRAIN 		(6)
BREAST 		(19)
CELL-LINE 		(1)
FIBROBLAST 		(2)
HEART 		(1)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(9)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TTGTGAGCGCTGGCGAGCAGCAGAGCCCCCAGCCTGTCTCCAGTGCCTTGGTGTGTGCGGCGATCAGGGGGGTCTTACAGGGTGGAGTCTTGAGGAGGGGGAGAGTTTCAGTTCTAAGCCCGGAGGTCAGAATGTGCCATACTCGGGGTGAGAGGGAGAAGATGTTCGTCCTAACCTTGTGCATACATCTCTGCCACCCCCTCCCAGAGCTGGCCCATCACTGGGGGCCGAAACCTGGCCCAGGAGCCGTCACAGCG
................................................................................................................................................((((((..(((((....((((.((.........)).))))...)))))..)))))).........................................................
.........................................................................................................................................138..................................................................207................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR189787SRR189786SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189782SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		GSM339994(GSM339994)
hues6. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343335SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR038853(GSM458536)
MELB. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..............................................................................................................................................TCGGGGTGAGAGGGAGAAGATGT............................................................................................23139.0039.0016.006.00--2.001.002.00--2.001.00-1.00---1.001.00-----1.00-------------------1.001.00-1.00--1.001.00-
......................................................................................................................................................................................ATACATCTCTGCCACCCCCTCC.....................................................2215.005.00-------------------1.001.00-1.00----1.00----------1.00-------------
..............................................................................................................................................TCGGGGTGAGAGGGAGAAGATG.............................................................................................2214.004.00------------------1.00------1.00----1.00--1.00------------------
.............................................................................................................................................CTCGGGGTGAGAGGGAGAAGATGT............................................................................................2413.003.00--3.00-------------------------------------------------
..............................................................................................................................................TCGGGGTGAGAGGGAGAAGAT..............................................................................................2113.003.003.00---------------------------------------------------
..............................................................................................................................................TCGGGGTGAGAGGGAGAAGACGT............................................................................................232.000.00-------1.001.00-------------------------------------------
..............................................................................................................................................TCGGGGTGAGAGGGAGAAG................................................................................................1912.002.00-------------1.00----------------------------------1.00---
..............................................................................................................................................TCGGGGTGAGAGGGAGAAGATGA............................................................................................2312.004.00----1.00-----------------------------1.00-----------------
..............................................................................................................................................TCGGGGTGAGAGGGAGAAGATGTA...........................................................................................2411.0039.00--------------------------------1.00-------------------
.TGTGAGCGCTGGCGAGCAGCA...........................................................................................................................................................................................................................................2111.001.00---------------1.00------------------------------------
.............................................................................................................................................CTCGGGGTGAGAGGGAGAAGACGT............................................................................................241.000.00-------1.00--------------------------------------------
...........................................................................................................................................TACTCGGGGTGAGAGGGAGAAG................................................................................................2211.001.00--1.00-------------------------------------------------
..........................................................................................................................................................................................ATCTCTGCCACCCCCTCCCAG..................................................2111.001.00-----------1.00----------------------------------------
...........................................................................................................................................TACTCGGGGTGAGAGGGAGAAGATGT............................................................................................2611.001.00------------------------1.00---------------------------
..GTGAGCGCTGGCGAGCT..............................................................................................................................................................................................................................................171.000.00---------------------1.00------------------------------
......................................................................................................................................................................................ATACATCTCTGCCACCCCCTTAA....................................................2311.001.00---------------------------------------------1.00------
......................................................................................................................................................................................ATACATCTCTGCCACCCCCT.......................................................2011.001.00-----------------------------------------------1.00----
...............................................................................................................................................CGGGGTGAGAGGGAGAAGATGT............................................................................................2211.001.001.00---------------------------------------------------
..............................................................................................................GTTCTAAGCCCGGAGGATC................................................................................................................................191.000.00---1.00------------------------------------------------
............................................................................................................................................ACTCGGGGTGAGAGGGAGAAGAT..............................................................................................2311.001.00---------------------------------------1.00------------
..............................................................................................................................................TCGGGGTGAGAGGGAGAAGATGTAA..........................................................................................2511.0039.00-----------------------------------------1.00----------
.........................................................CGGCGATCAGGGGGGTCTT.....................................................................................................................................................................................1911.001.00---1.00------------------------------------------------
.......................................................................................................................................................................................TACATCTCTGCCACCCCCTCAAA...................................................231.000.001.00---------------------------------------------------
................................................................................................................................................GGGGTGAGAGGGAGAAGATGT............................................................................................2111.001.00-----1.00----------------------------------------------
......................................................................................................................................................................................................................................AAACCTGGCCCAGGAGC..........1711.001.00--------------1.00-------------------------------------
..............................................................................................................................................TCGGGGTGAGAGGGAGAAGATGC............................................................................................2311.004.00--------1.00-------------------------------------------
..........................................................................................TGAGGAGGGGGAGAGTTTAGGT.................................................................................................................................................221.000.00----------1.00-----------------------------------------
.........................................................CGGCGATCAGGGGGGTTT......................................................................................................................................................................................181.000.00---1.00------------------------------------------------
......................................................................................................................................................................................ATACATCTCTGCCACCCCCTC......................................................2111.001.00----------------------------1.00-----------------------
......................................................................................................................................................................................ATACATCTCTGCCACCCCCTT......................................................2111.001.00----------------------------------------1.00-----------
..........................................................................................................................................................................................ATCTCTGCCACCCCCTCCC....................................................1911.001.00-------------------------------------1.00--------------
......................................................................................................................................................................................ATACATCTCTGCCACCCCCTCCCAG..................................................2511.001.00------------------------------------1.00---------------
..........................................................................................................................................................................................ATCTCTGCCACCCCCT.......................................................1650.200.20---------------------------------------------------0.20
.....................................................TGTGCGGCGATC................................................................................................................................................................................................1280.120.12-----------0.12----------------------------------------

Antisense strand
TTGTGAGCGCTGGCGAGCAGCAGAGCCCCCAGCCTGTCTCCAGTGCCTTGGTGTGTGCGGCGATCAGGGGGGTCTTACAGGGTGGAGTCTTGAGGAGGGGGAGAGTTTCAGTTCTAAGCCCGGAGGTCAGAATGTGCCATACTCGGGGTGAGAGGGAGAAGATGTTCGTCCTAACCTTGTGCATACATCTCTGCCACCCCCTCCCAGAGCTGGCCCATCACTGGGGGCCGAAACCTGGCCCAGGAGCCGTCACAGCG
................................................................................................................................................((((((..(((((....((((.((.........)).))))...)))))..)))))).........................................................
.........................................................................................................................................138..................................................................207................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR189787SRR189786SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189782SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		GSM339994(GSM339994)
hues6. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343335SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR038853(GSM458536)
MELB. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...............................................................................GGGTGGAGTCTTGAGAG................................................................................................................................................................. 172.000.00--------------------------1.00--1.00----------------------
........................GCCCCCAGCCTGTCTCCACAG.................................................................................................................................................................................................................... 211.000.00-----------------------------------1.00----------------
..............................................................................................................................................................................................................................GGGGGCCGAAACCTGGCCTCG.............. 211.000.00-------------------------------1.00--------------------