ID: uc002egp.17
GENE: CYLD(17)
chr16:50830035-50830284+


(3)
AGO1.ip
(1)
AGO2.ip
(2)
AGO3.ip
(17)
B-CELL
(14)
BRAIN
(17)
BREAST
(27)
CELL-LINE
(3)
CERVIX
(1)
FIBROBLAST
(8)
HEART
(3)
HELA
(1)
KIDNEY
(9)
LIVER
(3)
OTHER
(53)
SKIN
(4)
UTERUS
(1)
XRN.ip

Sense strand
TGGCCCCAGAATCCTTTCAGAAACCAAGAAATGAGAATATGTCAAGGGTTAAAGGAGGCTTTCACTTCCAGAAATCAGAAGTAAAATAAAGGCTTTTAGAGCCTGAAATTAGCTTTTTGGAAATGATAGGATTATAAAATCACTGGCAAAAGGGTTTAGAACTTGACTGCCCTATAAAGAGTTCTTCCTCTGTGCCATAGGTGGTCAGAATGGCTTCAACATTCCTCAAGTCACCCCATGCCCAGAAGTA
...............................................................................................................................................(((((...(((...(((((((..............))))))).)))...))))).....................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577740(Rovira)
total RNA. (breast)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577579(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR040006(GSM532891)
G601N. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR191515(GSM715625)
4genomic small RNA (size selected RNA from to. (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038855(GSM458538)
D10. (cell line)
TAX577738(Rovira)
total RNA. (breast)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR040011(GSM532896)
G529T. (cervix)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577580(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR191506(GSM715616)
146genomic small RNA (size selected RNA from . (breast)
SRR189783TAX577742(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR189784SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACTT......................................................................................231161.00161.0017.002.00-1.001.006.002.004.001.004.002.002.003.004.00-1.005.002.003.003.004.00-3.002.003.001.00--3.003.00-3.003.001.00-3.002.003.002.00-1.00--3.00-2.001.002.00-1.002.00-2.002.001.00-2.001.001.001.001.001.00----1.002.001.003.00--1.00--1.00--2.001.00------1.00---2.00-1.00-1.001.00-1.001.00--1.001.001.00------1.00-1.00-----1.001.00--1.00-----------1.00-1.00----1.001.00-----1.00--1.001.00---1.001.001.00---
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACT.......................................................................................221123.00123.00-6.00-4.004.003.005.002.002.00--2.003.001.00-1.001.002.003.003.00-2.00-3.00--3.001.001.001.00--1.003.002.00-2.001.00-4.00-3.004.00--1.00---1.00----1.00-1.002.001.001.00-2.00-3.00-2.001.00-----1.002.001.001.00----1.00-1.00-1.002.001.001.00-1.00-1.00-------2.00-----1.00-1.00-1.00---1.00-1.00-1.00------1.00-1.001.001.00--------1.00-1.001.00--1.001.00----1.00---1.00-1.00------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACT.......................................................................................23136.0036.00--6.00---1.00--1.002.00----1.00-1.00---1.00--1.001.001.00-------1.00-----1.00-------------------1.00----1.001.001.001.00-----1.00-----1.00--2.00--------1.00-1.00-2.00----1.00----1.00-------------1.00--------------1.00--------------1.00-----------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAAC........................................................................................21126.0026.00-1.00-5.005.00--1.001.00------------1.00------------------------1.00------------1.00-----------1.00----1.00-----1.00------1.00-1.00---1.00--1.00------------------------1.00-----1.00-----------------------------1.00--
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACTT......................................................................................24117.0017.001.00------1.00--1.002.00---1.00----1.001.00-----1.00----------1.00-------1.001.00------1.00-------------------------------------------------------------1.00-------------1.001.001.00-----------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAAC........................................................................................22112.0012.00----------1.00----1.00-1.00------1.002.00-2.00---1.00-----------------1.00---1.00-------------------------------------------------------------------------------1.00----------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAA.........................................................................................20111.0011.00-----------------------------------1.00---------------1.00---3.00------3.00-2.00----------------------------------------------1.00--------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAG...........................................................................................18111.0011.00--------------4.00---------------2.00-------------1.00------1.00------------------2.00-----------------------------1.00-------------------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGA..........................................................................................1919.009.00-2.00--------------------------------------2.00---2.00---1.00--------------------------------2.00--------------------------------------------------------------------------------
...........................................................................................................................................TCACTGGCAAAAGGGTTTAGAACT.......................................................................................2418.008.004.00------------1.00-------------1.00----------1.00----------------------------------------------------------1.00----------------------------------------------------------------
..................................................................................................................................................CAAAAGGGTTTAGAACT.......................................................................................1715.005.00--5.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTA............................................................................................1714.004.00--------------1.00-------------------------------------------------------------------------1.00-----------1.00--------------------1.00----------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGA..........................................................................................2014.004.00------------------------------1.00---------------------------------------------1.00-----------1.00-------------------1.00-----------------------------------------------------
..............................................................................................................................................CTGGCAAAAGGGTTTAGAACTT......................................................................................2214.004.00--------1.00----------------1.00-----------------------------------------------------1.00------------------------1.00---------------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAAA........................................................................................2112.0011.00------1.00--------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
...........................................................................................................................................TCACTGGCAAAAGGGTTTAGAACTT......................................................................................2512.002.00--------------------------------------------------------------------1.00--------------------------------------------------------1.00------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACTTT.....................................................................................2412.00161.00---------1.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CTTCAACATTCCTCAAGTCACCCCAT...........2612.002.00-----------------------------------------------------------------------------2.00------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACTTAT....................................................................................2611.0017.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACTTT.....................................................................................2511.0017.00-----------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
...........................................................................................................................................TCACTGGCAAAAGGGTTTA............................................................................................1911.001.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
.....................................TATGTCAAGGGTTAAAGGAGG................................................................................................................................................................................................2111.001.00------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
........................................................................................................................................................GGTTTAGAACTTGACCTA................................................................................181.000.00---------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------
...................................................................................................................TTTGGAAATGATAGGATGC....................................................................................................................191.000.00----------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................TAAAGAGTTCTTCCTTTC..........................................................181.000.00----------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTTG.....................................................................................2211.001.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................CAGAAGTAAAATAAAATCA............................................................................................................................................................191.000.00------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------
............................................................................................................................................CACTGGCAAAAGGGTTTA............................................................................................1811.001.00----------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACA.......................................................................................2311.0012.00-----------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTTGA....................................................................................2311.001.00----------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................AAGTCACCCCATGCCCAGAAGTA2311.001.00------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTT......................................................................................2111.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAA.........................................................................................2111.001.00------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACAAAC....................................................................................2511.0026.00---------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTTGACTG.................................................................................2611.001.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTTGACTGC................................................................................2711.001.00-------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------
............................................................................................................................................CACTGGCAAAAGGGTTTAG...........................................................................................1911.001.00---------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------
...................................................................................................................................................................................................CATAGGTGGTCAGAAGATA....................................191.000.00----------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-
..............................................................................................................................................CTGGCAAAAGGGTTTAGTAGC.......................................................................................211.000.00----------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
............................................AGGGTTAAAGGAGGCTTTCACTTCCA....................................................................................................................................................................................2611.001.00------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACTA......................................................................................2311.00123.00--------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACTTG.....................................................................................2411.001.00------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------
...................................................................................................................................................................................AGTTCTTCCTCTGTGCCTCTG..................................................211.000.00---------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACTTA.....................................................................................2511.0017.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................GTCACCCCATGCCCACCA...181.000.00------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------
.....................................................................................................................................................................................TTCTTCCTCTGTGCCATAGT.................................................201.000.00--------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACG.......................................................................................2311.0012.00--------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
............................AAATGAGAATATGTCAAG............................................................................................................................................................................................................1820.500.50------------------------------------------------------------------------------------------------------0.50-----------------------------------------------------------
....................................................................................................................................................AAAGGGTTTAGAACTT......................................................................................1640.250.25-----0.25------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................AAAGGGTTTAGAACT.......................................................................................1580.120.12-----0.12------------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
TGGCCCCAGAATCCTTTCAGAAACCAAGAAATGAGAATATGTCAAGGGTTAAAGGAGGCTTTCACTTCCAGAAATCAGAAGTAAAATAAAGGCTTTTAGAGCCTGAAATTAGCTTTTTGGAAATGATAGGATTATAAAATCACTGGCAAAAGGGTTTAGAACTTGACTGCCCTATAAAGAGTTCTTCCTCTGTGCCATAGGTGGTCAGAATGGCTTCAACATTCCTCAAGTCACCCCATGCCCAGAAGTA
...............................................................................................................................................(((((...(((...(((((((..............))))))).)))...))))).....................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577740(Rovira)
total RNA. (breast)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577579(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR040006(GSM532891)
G601N. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR191515(GSM715625)
4genomic small RNA (size selected RNA from to. (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038855(GSM458538)
D10. (cell line)
TAX577738(Rovira)
total RNA. (breast)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR040011(GSM532896)
G529T. (cervix)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577580(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR191506(GSM715616)
146genomic small RNA (size selected RNA from . (breast)
SRR189783TAX577742(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR189784SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
........................................................GGCTTTCACTTCCAGAAG................................................................................................................................................................................ 181.000.00---------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
...................GAAACCAAGAAATGAGAA..................................................................................................................................................................................................................... 1820.500.50-----------------------------------------------------------------------------------------------------------------------------------------------------------------0.50
...................................................................................................................................................................................AGTTCTTCCTCTGTGCCA..................................................... 1880.250.25----------------------------0.12--------------0.12----------------------------------------------------------------------------------------------------------------------