ID: uc001spv.2
GENE: CDK4(6)
chr12:58145470-58146007-


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(3)
AGO2.ip
(1)
AGO3.ip
(10)
B-CELL
(7)
BRAIN
(11)
BREAST
(46)
CELL-LINE
(4)
CERVIX
(6)
HEART
(7)
HELA
(1)
KIDNEY
(6)
LIVER
(2)
OTHER
(2)
RRP40.ip
(32)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
CCGGGGCCCCGATAACGGGCCGCCCCCACAGCACCCCGGGCTGGCGTGAGGTAAGTGCAGTCCCTTCCCAGGAATGAGAACCAGTGCCCGCCCCCCTCACAGCTTTCCACGCGTTCGTTTCGCGAGCTGGTTATGGAAGGGTCGCTCAAGGGCGGGAAGTGGGGCCTTTGTGGTCATGGGAAAGTATAATTTTAGGGACTGAGGTGTAGGATCTTCGATGCAAGGCATGTGTCATGTGTGATCTTTGTGCGGGGCGCGATTGTCCCAAAGGAAAAAGCGTTTTCTATTGCAGGGCCTCACGTGGCTGGAGGGGTTGGTATTGAGTCATTGTGTTATCTCTGGGGCCGGCCCCAAGGAAGACTGGGAGCGGGGGATGGGATGCTGGTGGTGTTCTTTGCGCTTTTTTTTTGGGAGTCCCTTTGTTGCTGCAGGCTCATACCATCCTAACTCTGTAAGCGACTTTTGGTGATAGGAGTCTGTGATTGTAGGGTCTCCCTTGATCTGAGAATGGCTACCTCTCGATATGAGCCAGTGGCTG
.......................................................................................................................................................................................................................................................................................................................................................................................................................................(((.((((((((.((.((((..((.((.......)).))..)))).)).))))))))....)))...................................................
..................................................................................................................................................................................................................................................................................................................................................................................................................................419..................................................................488................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR189782SRR207116(GSM721078)
Nuclear RNA. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM339996(GSM339996)
hues6Neuron. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
DRR001482(DRX001036)
Hela long total cell fraction, control. (hela)
SRR189786SRR038863(GSM458546)
MM603. (cell line)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR040008(GSM532893)
G727N. (cervix)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR038860(GSM458543)
MM426. (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
SRR029132(GSM416761)
MB-MDA231. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189787SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR343335SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR038859(GSM458542)
MM386. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR040029(GSM532914)
G026T. (cervix)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
TAX577743(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR038858(GSM458541)
MEL202. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR038861(GSM458544)
MM466. (cell line)
GSM532887(GSM532887)
G761N. (cervix)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATTGT....................................................24185.0085.004.00-12.0010.00-3.00-6.001.00-5.002.00-6.001.00--2.002.002.004.00-1.00-1.00-2.00-2.001.00--1.001.00----------------1.00----------2.00-1.00-1.00-2.00----1.00-----1.00-------------------1.001.00------------1.00------1.001.00----------1.00---1.00---
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATT......................................................22185.0085.0030.005.006.004.00--5.002.00--1.002.00------1.00-----1.001.00---1.001.00--1.00---1.001.001.002.00--1.00---------1.00--1.00-2.001.00----1.001.002.00-1.002.00---------1.00---1.00--1.00---1.00-------------------------1.00----------------1.00-----
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATTG.....................................................23132.0032.002.006.003.003.001.00-2.00----1.00--2.00-------1.001.00--1.00--1.00-----1.00----------1.00---1.001.00--------1.00----------1.001.00---------------1.00--------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGAT.......................................................2119.009.00--1.00-------1.00--------------1.00---------------------1.00--------1.00--------------------1.00---1.00-------------------1.00-1.00-----------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATAGGAGTCTGTGATTGT....................................................2318.008.00---------7.00--------1.00------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGA........................................................2017.007.00-1.001.00------------------------------1.00-------------1.00---------2.00-----------------------------1.00---------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCAGGCTCATACCATCCTAA...........................................................................................2416.006.00----4.00------------------------------------------------------------------------------------------1.00--------------------------------1.00----------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCAGGCTCATACCATCCTA............................................................................................2316.006.00--1.00-2.00------------2.00-------------------------------------------------------------------1.00-----------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCAGGCTCATACCATCCT.............................................................................................2216.006.002.00---1.00------1.00-------------------1.00--------------------------------------------------------------------------------------------------1.00--------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGAGTCTGTGATTGTAG..................................................1916.006.00-----1.00--5.00----------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................TAATTTTAGGGACTGAGGTGTAGGAT......................................................................................................................................................................................................................................................................................................................................2616.006.00-6.00-----------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATTGA....................................................2415.0032.00---2.00--------------------1.00-------------------------------------------------------1.00---------------------1.00------------------------------------
..........................................................................................................................................................................................................................................................................................................ACGTGGCTGGAGGGGTTGG.............................................................................................................................................................................................................................1914.004.00-4.00-----------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................GTAGGATCTTCGATGCAAGGCATG.....................................................................................................................................................................................................................................................................................................................2414.004.00-----4.00-------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATTGTAG..................................................2614.004.00-3.00----------------------------------1.00------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATCTGAGAATGGCTAC.......................2013.003.00------2.00-------1.00----------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................ACTGGGAGCGGGGGATGGGATGCTGGTGGCG....................................................................................................................................................313.000.00------------3.00------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATAGGAGTCTGTGATTGTAG..................................................2513.003.00-2.00--------------------1.00--------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTAGGGACTGAGGTGTAGGATCT....................................................................................................................................................................................................................................................................................................................................2313.003.00-3.00-----------------------------------------------------------------------------------------------------------------------------------------
.................................CCCCGGGCTGGCGTGAGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................203.000.00-----------------------1.00-------------------------2.00-----------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTGCAGGCTCATACCATCC..............................................................................................2213.003.003.00------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCAGGCTCATACCATCC..............................................................................................2112.002.00----2.00--------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGGCTACCTCTCGA................1812.002.00--------------------------------------------------------------2.00----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCAGGCTCATACCATCCTT............................................................................................2312.006.00-------------------1.00--------------------------------------------------------------------------------1.00--------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGGAGTCTGTGATTGTAG..................................................2012.002.00-1.00------1.00----------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGGCTACCTCTCGATAT.............2112.002.00-------------------------------------------------------2.00-----------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................GTGTGATCTTTGTGCGGGGCG..........................................................................................................................................................................................................................................................................................2112.002.00------------------------------------------------2.00------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATAGGAGTCTGTGATTG.....................................................2212.002.00------------------------------2.00------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................AGGGACTGAGGTGTAGGAA......................................................................................................................................................................................................................................................................................................................................1912.001.00--------------------------------------------2.00----------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGGCTCATACCATCCTAACTCTGTAAGCGACTTTTGGTGATAGGAGTCTGTGATTGTAG..................................................6412.002.00---------------2.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATAGGAGTCTGTGATTGTA...................................................2312.002.00-2.00-----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................AAGGGCGGGAAGTGGGGCA....................................................................................................................................................................................................................................................................................................................................................................................192.000.00-----------------------------------2.00-------------------------------------------------------------------------------------------------------
...........................................................GTCCCTTCCCAGGAATCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................192.000.00-----------------------------------------------------------------------------------------------------------1.00-----1.00-------------------------
.....................................................................................................................................................................................................................................................................................................................................................................AGACTGGGAGCGGGGGA....................................................................................................................................................................1712.002.00---------------------2.00---------------------------------------------------------------------------------------------------------------------
.................................CCCCGGGCTGGCGTGAGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------------------------1.00----------------------------------------------------------------------------------------------------------
....................................................................................................................GTTTCGCGAGCTGGTTATGGAAGGGT............................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATTGTGA..................................................2611.0085.00---1.00---------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GGGACTGAGGTGTAGGATCTTCGA................................................................................................................................................................................................................................................................................................................................2411.001.00-----------------------------------------------------1.00-------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAGGAGTCTGTGATTGT....................................................2011.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................CTCTGGGGCCGGCCCCAAGGAAGACTGGGAG...........................................................................................................................................................................3111.001.00------------------------------------------------------------------------------------------------------------------1.00------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTTGATCTGAGAATGGCTACCCCT...................261.000.00---------------------------------------------------------------------------------------------------------------------1.00---------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCAGGCTCATACCATCCTCA...........................................................................................2411.006.00------------------------------------------------------------1.00------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTGCAGGCTCATACCATCCT.............................................................................................2311.001.00-------------------------------------1.00-----------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................GTATTGAGTCATTGTGTT............................................................................................................................................................................................................1811.001.00-----------------------1.00-------------------------------------------------------------------------------------------------------------------
.............................AGCACCCCGGGCTGGCGTGAGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.00---------------------------1.00---------------------------------------------------------------------------------------------------------------
..................................................................................................................TCGTTTCGCGAGCTGGTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------------------------------------------------------1.00-----------------
................................ACCCCGGGCTGGCGTGAGGTAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.00-------------------------------------------------------------------------------------------------1.00-----------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCTTGATCTGAGAATGG...........................2011.001.00----------------------------------------------------------------------------------1.00--------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATTGTAT..................................................2611.001.00-----------------------------------------------------------1.00-------------------------------------------------------------------------------
.......................................................................................................................................................................................................................CGATGCAAGGCATGTGTCGGAT.............................................................................................................................................................................................................................................................................................................221.000.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................GCGTTCGTTTCG................................................................................................................................................................................................................................................................................................................................................................................................................................1221.001.00-----------------------0.50---------------------------------------------------0.50---------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTCCCTTTGTTGCTGCAGGCTC.......................................................................................................2711.001.00------------1.00------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCAGGCTCATACCATCCTAG...........................................................................................2411.006.00----------------------------------------------------------------------1.00--------------------------------------------------------------------
.................................................................................................................................................................................................AGGGACTGAGGTGTAGGA.......................................................................................................................................................................................................................................................................................................................................1811.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCTGAGAATGGCTACCTTT...................221.000.00----------------------------------------------------------------------------------------------------------------------1.00--------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATTGCAG..................................................2611.0032.00----------------------------------------------------------------------------1.00--------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCAGGCTCATACCATCCAA............................................................................................2311.002.00----1.00--------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTACCTCTCGATATGA...........1911.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATTGTAGT.................................................2711.004.00---------------------1.00---------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCAGGCTCATACCATCCTAACTCTGTAAGCGACTTTTGGTGATAGGAGTCTGTGATTGTAG..................................................6511.001.00---------------1.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAGGAGTCTGTGATTGTA...................................................2211.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATA......................................................2211.009.00----------------------------------------------------------------------1.00--------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTCTGTAAGCGACTTTTA.........................................................................211.000.00----------------------------1.00--------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................TGGTATTGAGTCATTGTGTTATCTCTGGGGC.................................................................................................................................................................................................3111.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------
....................................CGGGCTGGCGTGAGGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------------------------------------------------------------------------1.00------------------------------------------------------
.............................AGCACCCCGGGCTGGCGTGAGGGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.00---------------------------1.00---------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGCGCTTTTTTTTC.................................................................................................................................181.000.00------------------------------------------------------------------------------------------------------------1.00------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATTTT....................................................2411.0085.00-----------------------------------------------------------------------1.00-------------------------------------------------------------------
...............................CACCCCGGGCTGGCGTGAGGGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.00--------------------------------------------------------------------------------------------------------------------------------------1.00----
.........................................................................................................................................................................................................................................................................................................................................................................TGGGAGCGGGGGATGTG................................................................................................................................................................171.000.00--------------------------------------------------------------------------------------------------------------1.00----------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTTGGTGATAGGAGTCT............................................................2011.001.00------------------------------------------------------1.00------------------------------------------------------------------------------------
..............................................................................................................GCGTTCGTTTCGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................1411.001.00--------------------------------------------------------------------------------------------------------1.00----------------------------------
................................ACCCCGGGCTGGCGTGAGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00---------------------------------------------------------------------------------------------------------1.00---------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCTGAGAATGGCTAA.......................191.000.00-------------------------------------------------------------------------------------------------------------------------------1.00-----------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATAGGAGTCTGTGATTGTAAA.................................................261.000.00------------------------------------------------------------------------------------------------------------------------------------1.00------
.....................................................................................................................TTTCGCGAGCTGGTTATGGAAGGGTCG..........................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00---------------------------------------------------------------1.00---------------------------------------------------------------------------
...............................................................................................................CGTTCGTTTCGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................1311.001.00---------------------------------------------------------------------------1.00---------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTGATTGTAGGGTCTC............................................1911.001.00---------------------------------------------------1.00---------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGGCTCATACCATCCTAA...........................................................................................2311.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAGAATGGCTACCTCTC..................2111.001.00------------------------------------------------------1.00------------------------------------------------------------------------------------
........................................................................................................................CGCGAGCTGGTTATGGAAGG..............................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------------------------1.00-----------------------------------------------
.....................................................................................................................................................................................................................TTCGATGCAAGGCATGTGT..................................................................................................................................................................................................................................................................................................................1911.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................ATGTGTGATCTTTGTGCGGGGCG..........................................................................................................................................................................................................................................................................................2311.001.00----------------------------------------------------------------------------------------------1.00--------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATTGCT...................................................2511.0032.00----------------1.00--------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TAGGGACTGAGGTGTAGGATC.....................................................................................................................................................................................................................................................................................................................................2111.001.00-------------------------------------------------------------------------------------------------------------1.00-----------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCAGGCTCATACCATCCTAACTCTGTAAGCGACTTTTGGTGATAGGAGTCTGTGATTGTAGT.................................................6611.001.00---------------1.00---------------------------------------------------------------------------------------------------------------------------
.................................CCCCGGGCTGGCGTGAGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------------------------------------1.00----------------
...............................CACCCCGGGCTGGCGTGAGGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.00---------------------------1.00---------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTACCTCTCGATATGAGC.........2011.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAGGAGTCTGTGAT.......................................................1811.001.00----------------------------------1.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................AGCGTTTTCTATTGCAGGGCC..................................................................................................................................................................................................................................................2111.001.00-------------------------1.00-----------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGAA.......................................................2111.007.00---------------------------------------------------------------------------------------------------------------1.00---------------------------
..................................................................................................................................................................................................GGGACTGAGGTGTAGTGG......................................................................................................................................................................................................................................................................................................................................181.000.00--------------------------------------------------------------------------------------------1.00----------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATTGAT...................................................2511.0032.00--1.00----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................GAAAGTATAATTTTAGGGACTGAGGTGTAGGA.......................................................................................................................................................................................................................................................................................................................................3211.001.00---------------------------------------------1.00---------------------------------------------------------------------------------------------
............................CAGCACCCCGGGCTGGCGTGAGGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.00----------------------------------1.00--------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................GGGAGCGGGGGATGGGAAT.............................................................................................................................................................191.000.00----------------------------------1.00--------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCAGGCTCATACCATCCTAC...........................................................................................2411.006.00----------------1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TGTGTCATGTGTGATCTTTTTG.................................................................................................................................................................................................................................................................................................221.000.00---------------------------------------------1.00---------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATTGTA...................................................2511.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCTACCTCTCGATATGA...........2111.001.00--------------------------------------------------------------------------1.00----------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAGGAGTCTGTGATTGTAGGGT...............................................2611.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAGGAGTCTGTGATTGTAG..................................................2311.001.00---------------------------------------------------------------------------------------------------------------------------1.00---------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCTACCTCTCGATATT............201.000.00--------------------------------------1.00----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGATTGC....................................................2411.0032.00----------------1.00--------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGGCTCATACCATCCTAA...........................................................................................2211.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTG...........................................................1711.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................ATGGGATGCTGGTGGTCTCC.................................................................................................................................................201.000.00------------1.00------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGGCTCATACCATCCTA............................................................................................2111.001.00---------------------------------------------------------------------------------------------------------------------------------1.00---------
.............................AGCACCCCGGGCTGGCGTGAGGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.00-----------------------------------------1.00-------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................ATTGCAGGGCCTCACGTGGCTGGAGGGGC................................................................................................................................................................................................................................291.000.00------------1.00------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTTGATCTGAGAATGGCTAACT.....................251.000.00-----------------------------------------1.00-------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................AGGAAGACTGGGAGCAAA.......................................................................................................................................................................181.000.00------------------------------------------1.00------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATAGGAGTCTGTGACTGT....................................................2411.007.00----------------1.00--------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGGAGTCTGTGATTG.....................................................1720.500.50--------------------------------------------------------------------------0.50----------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGGAGTCTGTGATT......................................................1720.500.50----------------------------------------------------------------------------------------------------------------------------------------0.50--
...........................................................................................................................................................................................AATTTTAGGGACTGAGG..............................................................................................................................................................................................................................................................................................................................................1720.500.50----------------------0.50--------------------------------------------------------------------------------------------------------------------
...............................................................CTTCCCAGGAATGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1640.250.25------------------------------------0.25------------------------------------------------------------------------------------------------------
...................................CCGGGCTGGCGTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1450.200.20-------------------------------------0.20-----------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TGGTGTTCTTTGCG...........................................................................................................................................1470.140.14------------0.14------------------------------------------------------------------------------------------------------------------------------
............................................................................................CCCCTCACAGCTTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................1590.110.11-----------------------------------------------------------------------------------------------------------------------------------------0.11-

Antisense strand
CCGGGGCCCCGATAACGGGCCGCCCCCACAGCACCCCGGGCTGGCGTGAGGTAAGTGCAGTCCCTTCCCAGGAATGAGAACCAGTGCCCGCCCCCCTCACAGCTTTCCACGCGTTCGTTTCGCGAGCTGGTTATGGAAGGGTCGCTCAAGGGCGGGAAGTGGGGCCTTTGTGGTCATGGGAAAGTATAATTTTAGGGACTGAGGTGTAGGATCTTCGATGCAAGGCATGTGTCATGTGTGATCTTTGTGCGGGGCGCGATTGTCCCAAAGGAAAAAGCGTTTTCTATTGCAGGGCCTCACGTGGCTGGAGGGGTTGGTATTGAGTCATTGTGTTATCTCTGGGGCCGGCCCCAAGGAAGACTGGGAGCGGGGGATGGGATGCTGGTGGTGTTCTTTGCGCTTTTTTTTTGGGAGTCCCTTTGTTGCTGCAGGCTCATACCATCCTAACTCTGTAAGCGACTTTTGGTGATAGGAGTCTGTGATTGTAGGGTCTCCCTTGATCTGAGAATGGCTACCTCTCGATATGAGCCAGTGGCTG
.......................................................................................................................................................................................................................................................................................................................................................................................................................................(((.((((((((.((.((((..((.((.......)).))..)))).)).))))))))....)))...................................................
..................................................................................................................................................................................................................................................................................................................................................................................................................................419..................................................................488................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR189782SRR207116(GSM721078)
Nuclear RNA. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM339996(GSM339996)
hues6Neuron. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
DRR001482(DRX001036)
Hela long total cell fraction, control. (hela)
SRR189786SRR038863(GSM458546)
MM603. (cell line)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR040008(GSM532893)
G727N. (cervix)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR038860(GSM458543)
MM426. (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
SRR029132(GSM416761)
MB-MDA231. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189787SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR343335SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR038859(GSM458542)
MM386. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR040029(GSM532914)
G026T. (cervix)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
TAX577743(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR038858(GSM458541)
MEL202. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR038861(GSM458544)
MM466. (cell line)
GSM532887(GSM532887)
G761N. (cervix)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
...............................................................................................................................................................................................................................................................................................................................TTGAGTCATTGTGTTAAATA....................................................................................................................................................................................................... 202.000.00----------------------------------------------------2.00--------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGGCTCATACCATCCTAA........................................................................................... 2212.002.00--------------------------------1.00--------------------------------------------------------1.00-------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTGCAGGCTCATACCATCCTA............................................................................................ 2411.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................GGTTATGGAAGGGTCGCTCAAGGGCGG............................................................................................................................................................................................................................................................................................................................................................................................... 2711.001.00--------------------------------------------------------------------1.00----------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATACCATCCTAACTCTG...................................................................................... 1911.001.00-------------------------------------------------------------------------1.00-----------------------------------------------------------------
...................................................................................................................................................................................................................................TGTGTCATGTGTGATG....................................................................................................................................................................................................................................................................................................... 161.000.00---------------------------------------------------------------------------------------------1.00---------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................GAGCGGGGGATGGGATG............................................................................................................................................................. 171.000.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTTTGTTGCTGCAGGCTCATACCA................................................................................................. 2711.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCATCCTAACTCTGTA.................................................................................... 1911.001.00-------------------------------------------------------------------------1.00-----------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGGCTCATACCATCCTAAT.......................................................................................... 2311.000.00-------------------------------------------1.00-----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................AAGCGTTTTCTATTGCAGG..................................................................................................................................................................................................................................................... 1911.001.00----------------------------------------------------------------1.00--------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................GACTGGGAGCGGGGGCT................................................................................................................................................................... 171.000.00----------------------------------------------------------------------------------------------------------------------------1.00--------------
.................................................................................................................................................................................................................................................................................................................................................................................GGGGATGGGATGCTGAGCC...................................................................................................................................................... 191.000.00----1.00--------------------------------------------------------------------------------------------------------------------------------------
....................................................................................TGCCCGCCCCCCTCACAGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................. 201.000.00---------------------1.00---------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCCCTTTGTTGCTGCAGGCTCATACCA................................................................................................. 3011.001.00------------------------------------1.00------------------------------------------------------------------------------------------------------
..............................................TGAGGTAAGTGCAGTCCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1911.001.00------------------------------------------------------------------------------------------------------------------------------1.00------------
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGGTGGTGTTCTACA............................................................................................................................................. 181.000.00-------------------1.00-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................GACTGGGAGCGGGGGCTCC................................................................................................................................................................. 191.000.00------------------------------------------1.00------------------------------------------------------------------------------------------------
....................................................................................................................................................................CCTTTGTGGTCATGGGAAAG.................................................................................................................................................................................................................................................................................................................................................................. 2011.001.00---------------------------------------1.00---------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................CTGGAGGGGTTGGTATTGAGTCATTGTGTTA........................................................................................................................................................................................................... 3111.001.00------------------------------------------------------------------------------------------------1.00------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................GACTGGGAGCGGGGGCTC.................................................................................................................................................................. 181.000.00----------------------------------------------------------------------------------------------------------1.00--------------------------------
.............................................GTGAGGTAAGTGCAGTCCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 2011.001.00-------------------------------------------------------------------------------------------------------------------1.00-----------------------
......................................................................................................................................................................................................................................................................................................................................................................GACTGGGAGCGGGGGACTC................................................................................................................................................................. 191.000.00-----------------------------------------------------------------------------------------------------------------------------1.00-------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................CCCTTTGTTGCTGCAGGCTCATACCA................................................................................................. 2611.001.00----------------------------------------------1.00--------------------------------------------------------------------------------------------
...........................................GCGTGAGGTAAGTGCAGTCCCTTCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 2611.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGGCTCATAC................................................................................................... 1560.170.17-----------0.17-------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TCTTCGATGCAAG.......................................................................................................................................................................................................................................................................................................................... 13100.100.10------------------------------------------------------------------------------------------------------------------------------------------0.10