ID: uc001kuo.1
GENE: NOLC1(1)
chr10:103916782-103916995+


(3)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(4)
AGO2.ip 		(1)
AGO3.ip 		(16)
B-CELL 		(12)
BRAIN 		(14)
BREAST 		(55)
CELL-LINE 		(6)
CERVIX 		(2)
FIBROBLAST 		(8)
HEART 		(5)
HELA 		(1)
KIDNEY 		(8)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(45)
SKIN 		(1)
TESTES 		(4)
UTERUS 		(1)
XRN.ip

Sense strand
CAGGATGCCAATGCCTCTTCCCTCTTAGACATCTATAGCTTCTGGCTCAAGTAAGCCTTTCCTGTTCCATTTTGGCTATTTTCTCCCCCAAGATAGGCTGGGCTGTGTTTCTTGGTTTGGGAAGATTCCAGTCCCCTAGAAATTGGTCCAATCTACCTCAGCAGGTCTGCCAAGGTCCCAGAGCGAAAGTTACAGGCAAATGGACCAGTGGCTA
..........................................................................................((.(((..(((((((.((((((.((.((((((...))))))...)).)))))))))))))..))).))........................................................
....................................................................................85.............................................................................164................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189786DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR038858(GSM458541)
MEL202. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR038863(GSM458546)
MM603. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR189787SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR189784GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577739(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR038862(GSM458545)
MM472. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		TAX577744(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM359177(GSM359177)
hela_nucl_a. (hela)		GSM956925AGO2Paz8(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		GSM532876(GSM532876)
G547T. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335TAX577743(Rovira)
total RNA. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR029129(GSM416758)
SW480. (cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR040031(GSM532916)
G013T. (cervix)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040018(GSM532903)
G701N. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191471(GSM715581)
119genomic small RNA (size selected RNA from . (breast)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
.........................................................................................AAGATAGGCTGGGCTGTGTTTCT......................................................................................................23178.0078.0013.00--3.001.004.002.003.001.003.003.00-1.001.001.00-4.00--2.002.004.00--1.00-2.001.00--1.001.00--1.00-1.00--1.002.00---1.00---1.00-1.001.001.00-----1.001.00---1.00---------------1.00---------1.00----------1.001.001.00---1.00-1.00----1.00-1.001.00---1.00---------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTC.......................................................................................................22155.0055.0012.00-8.002.002.00-2.001.00--2.002.00-------1.001.00-1.00---1.00--1.001.00--1.00-1.001.00-2.00---2.00------------1.002.00--------1.00------1.00------------1.00----------1.001.00-1.00-----1.00-------------1.00----------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTT........................................................................................................21145.0045.004.00--5.00--1.001.00-1.00-3.00--1.00--2.00----1.00------1.00-1.001.001.00-------2.00---1.002.00---1.00-1.00-2.001.00-1.001.00-------1.00-1.00-1.00---1.00-1.00---1.00---1.00-------------1.00----1.00----------1.00---------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTT.........................................................................................................20116.0016.00--5.00-1.001.00---------1.00--------2.00----1.001.001.00-------------------1.00------------1.00------------1.00----------------------------------------------------------------------------------------------------------
...........................................................................................................................................AAATTGGTCCAATCTACCTCAG.....................................................22111.0011.00-8.00---------------------------------------------2.00----------------------------------------1.00-----------------------------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTTCTTGG...................................................................................................2316.006.00------------4.00--1.00-----------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------
.......................CTTAGACATCTATAGCTTCTGGC........................................................................................................................................................................2315.005.00------------------4.00-------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTAA......................................................................................................2314.0045.00----------------------------1.00------------------------------------------1.00-----------------------1.00----------------1.00-----------------------------------------------------------------------
........................................................................................CAAGATAGGCTGGGCTGTGTTT........................................................................................................2214.004.00---1.00---------2.00-----------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTCTT.....................................................................................................2414.004.004.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................AGATAGGCTGGGCTGTGTTTCT......................................................................................................2213.003.002.00--------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTA........................................................................................................2113.0016.00----1.00-1.00--------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGT..........................................................................................................1913.003.00-------------------------------------------------1.00---2.00----------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTA.......................................................................................................2213.0045.00---------1.00-------------1.00-------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTT.......................................................................................................2213.0045.00-----------------------------------1.00--------------------------1.00----1.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................AGGTCCCAGAGCGAAAGTT.......................1912.002.00-------------------------------------------1.00--------------------------------------------------------------------------1.00-----------------------------------------------------------------
..........................................................................................AGATAGGCTGGGCTGTGTTT........................................................................................................2012.002.00-----------------------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................CAAGATAGGCTGGGCTGTGTTTC.......................................................................................................2312.002.00---1.00--------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTTCTTG....................................................................................................2212.002.00-1.00-------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTTATG....................................................................................................2512.0045.00-------------------------2.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTTT......................................................................................................2312.0045.00-1.00------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTAA.......................................................................................................2212.0016.00-------1.00-------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGGGT..........................................................................................................191.000.00-------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
...........................................................................................................................................AAATTGGTCCAATCTACCACAC.....................................................221.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTTCTTGGT..................................................................................................2411.001.00---------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
............................ACATCTATAGCTTCTGGCTCAACAG.................................................................................................................................................................251.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGGGTT.........................................................................................................201.000.00--------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................CTGCCAAGGTCCCAGAGCGAAAGTTACAGGCAAATG............3611.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGGTT........................................................................................................211.000.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................AGACATCTATAGCTTCTGGCTCAAGTAA................................................................................................................................................................2811.001.00---------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------
..............................................................................................................................................................................................TACAGGCAAATGGACCAGTGGCT.2311.001.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AAATTGGTCCAATCTACCTCAA.....................................................2211.001.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTCTAA....................................................................................................2511.0078.00--------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------
.................................................................................................................................................................................CCAGAGCGAAAGTTACAGGCA................2111.001.00--------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTAA........................................................................................................2111.003.00-------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
.....................................................................................................................................................................TCTGCCAAGGTCCCAGAGCGA............................2111.001.00-----------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................GCAAATGGACCAGTGGCT.1811.001.00--------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................GATAGGCTGGGCTGTGTTTCTT.....................................................................................................2211.001.00---------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTCC......................................................................................................2311.0055.00--------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTT........................................................................................................1811.001.00----------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
...........................................................................................................................................AAATTGGTCCAATCTACCTCAGA....................................................2311.0011.00-------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................................TAGAAATTGGTCCAATCTACCT........................................................2211.001.00------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
...........................................................................................GATAGGCTGGGCTGTGTTTCT......................................................................................................2111.001.00----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTAATG....................................................................................................2511.0045.00-------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................AGACATCTATAGCTTCTG..........................................................................................................................................................................1811.001.00-------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................AGATAGGCTGGGCTGTGTTTA.......................................................................................................2111.002.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTAT......................................................................................................2311.0045.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................CAAATGGACCAGTGGCTA1811.001.00----------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTTC.......................................................................................................1911.001.00--------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
...........................................................................................................................................AAATTGGTCCAATCTACCTCA......................................................2111.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTTAG......................................................................................................2011.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................CCAAGATAGGCTGGGCTGTGTTTC.......................................................................................................2411.001.00--------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................CTATAGCTTCTGGCTCAAGTCTGC..............................................................................................................................................................241.000.00-------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................GATAGGCTGGGCTGTGTTTCTTG....................................................................................................2311.001.00----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CAGAGCGAAAGTTACAGGC.................1911.001.00----------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................AGATAGGCTGGGCTGTGTTTC.......................................................................................................2111.001.00------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
..........ATGCCTCTTCCCTCTTAGACATCTACAGC...............................................................................................................................................................................291.000.00------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTTCCTGG...................................................................................................2311.001.00--------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................CCAAGGTCCCAGAGCGAAAGTTACAG...................2611.001.00---------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
........................TTAGACATCTATAGCTTCTGGCTCAA....................................................................................................................................................................2611.001.00-------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
........................................................................................CAAGATAGGCTGGGCTGTGTCTC.......................................................................................................231.000.00--------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................AGTTACAGGCAAATGGACCAGTGGC..2511.001.00--------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
...........................................................................................................................................AAATTGGTCCAATCTACCTAAG.....................................................221.000.00---------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGT............................................................................................................1711.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................AAAGTTACAGGCAAATGGACCAGTGGCTA2911.001.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTTCTTGGA..................................................................................................2411.006.00--------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................AAAGTTACAGGCAAATGGACCAGTG....2520.500.50-------------0.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................AAAGTTACAGGCAAATGGACC........2120.500.50-0.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CAATCTACCTCAGCAG..................................................1620.500.50---------------------------------0.50------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GGCAAATGGACCAGTGGC..1820.500.50-----------------------------------------------------------0.50----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................AGCGAAAGTTACAGGCAAATGGACCA.......2620.500.50----------------------0.50-----------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................AGTTACAGGCAAATGGACC........1920.500.50--------------------------------------------------------------------------------------------------------------------------------0.50-------------------------------------------------------
.........................................................................................................................................................................................AAAGTTACAGGCAAATGGACCA.......2220.500.50--------------------------------0.50-------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................AAAGTTACAGGCAAATGGACCAG......2320.500.50-0.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CCAGAGCGAAAGT........................13100.100.10-----------------------------------------------------------------------------------------------------------------------------------------0.10----------------------------------------------

Antisense strand
CAGGATGCCAATGCCTCTTCCCTCTTAGACATCTATAGCTTCTGGCTCAAGTAAGCCTTTCCTGTTCCATTTTGGCTATTTTCTCCCCCAAGATAGGCTGGGCTGTGTTTCTTGGTTTGGGAAGATTCCAGTCCCCTAGAAATTGGTCCAATCTACCTCAGCAGGTCTGCCAAGGTCCCAGAGCGAAAGTTACAGGCAAATGGACCAGTGGCTA
..........................................................................................((.(((..(((((((.((((((.((.((((((...))))))...)).)))))))))))))..))).))........................................................
....................................................................................85.............................................................................164................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189786DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR038858(GSM458541)
MEL202. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR038863(GSM458546)
MM603. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR189787SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR189784GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577739(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR038862(GSM458545)
MM472. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		TAX577744(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM359177(GSM359177)
hela_nucl_a. (hela)		GSM956925AGO2Paz8(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		GSM532876(GSM532876)
G547T. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335TAX577743(Rovira)
total RNA. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR029129(GSM416758)
SW480. (cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR040031(GSM532916)
G013T. (cervix)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040018(GSM532903)
G701N. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191471(GSM715581)
119genomic small RNA (size selected RNA from . (breast)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
.AGGATGCCAATGCCTAAG................................................................................................................................................................................................... 1814.170.00--------------0.17--------0.330.17---------0.33--------------------------1.330.330.33---0.170.171.000.17----------------------------------------------------0.830.33-0.500.50-0.170.33-0.17-0.500.170.500.170.330.170.33--0.170.330.170.170.33---0.17-0.170.17-0.170.170.170.170.170.170.17-0.170.17--0.170.17--0.170.17-0.17--0.170.17-0.170.17-
.AGGATGCCAATGCCT...................................................................................................................................................................................................... 1565.505.50------------------------------------------------------------0.17----0.17---0.17--0.170.17--------------------------------------------------0.17-----0.170.33-0.33-0.33-0.17-0.17-0.330.33--0.170.17--0.33--0.17--0.17----------0.170.17--0.170.17--0.17-0.170.17--0.17---
.................................................................................................................................................GTCCAATCTACCTCAAGTT.................................................. 192.000.00-------------------------------------2.00--------------------------------------------------------------------------------------------------------------------------------------------------
.AGGATGCCAATGCCTAAGC.................................................................................................................................................................................................. 192.000.00------------------------------------------------------------0.17-----0.17----0.17----------------------------------------------------0.17--0.170.170.33-0.170.33----------0.17----------------------------------------
.AGGATGCCAATGCCTAA.................................................................................................................................................................................................... 171.170.00----------------------------------------------------------------0.17-------------------------------------------------------------0.17--0.17---0.17--------------0.33----------------------------------0.17
..............................................................TGTTCCATTTTGGCTAAT...................................................................................................................................... 181.000.00----------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
................................................................................................................................................GGTCCAATCTACCTCAGCT................................................... 191.000.00--------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CAATCTACCTCAGCAAAA................................................ 181.000.00---------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CAATCTACCTCAGCATA................................................. 171.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................GCAGGTCTGCCAAGG....................................... 1530.670.67-----------------------------------------------------------------------------------------------------------------------------0.67----------------------------------------------------------
.................................TATAGCTTCTGGCTCA..................................................................................................................................................................... 1640.250.25------------------------------------------------------------------------------------------------------------------------------------------------------0.25---------------------------------
.AGGATGCCAATGCCTAATA.................................................................................................................................................................................................. 190.170.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------0.17--------------------