ID: uc001fpr.2
GENE: CRABP2(2)
chr1:156670795-156671044-


(2)
AGO2.ip 		(3)
BRAIN 		(18)
BREAST 		(16)
CELL-LINE 		(10)
CERVIX 		(1)
HEART 		(2)
HELA 		(6)
LIVER 		(6)
OTHER 		(2)
RRP40.ip 		(29)
SKIN 		(4)
UTERUS 		(1)
XRN.ip

Sense strand
CCCCTCATCTTTCAGGGCTGCACCGCCTACCGTCTCCTTCAAGGCACTTTCTTAGACACCCAGGCACCAGGCAGATGCACCCCCCAACACACCCACCCCAAGCAAGTCACAAATCAGCCTGCTCCAACTGTCTTATGGGGAGGGTGTGAGAGAGGTGCCCAAAGGCCCCTAAAAGGTGAGCCTCTCCTCTCTCCCCACAGGGGTGAATGTGATGCTGAGGAAGATTGCTGTGGCTGCAGCGTCCAAGCCA
.......................................................................................................................................(((((((((.....((((((((((....))).((.....))...)))))))..))))))))).....................................................
..................................................................................................................................131..................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR189786SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577579(Rovira)
total RNA. (breast)		SRR189782SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189784SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189787SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)		GSM532874(GSM532874)
G699T. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		SRR040041(GSM532926)
G612T. (cervix)		SRR040014(GSM532899)
G623N. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR343335SRR040011(GSM532896)
G529T. (cervix)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR040009(GSM532894)
G727T. (cervix)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040010(GSM532895)
G529N. (cervix)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR040027(GSM532912)
G220T. (cervix)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR040035(GSM532920)
G001T. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189783GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029131(GSM416760)
MCF7. (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
.........................................................................................................................................................................................................................AGGAAGATTGCTGTGGCTGCAG...........22111.0011.00-10.00------1.00--------------------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTG.............................................................................................22111.0011.001.00-1.004.00-1.00-1.00--------------------2.00-------------------------------------------------1.00----------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTG.............................................................................................2319.009.003.00--1.001.00-----------------2.00--2.00---------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGT..............................................................................................2118.008.00-2.00--1.00-------1.00-------1.001.00-1.00---------------1.00-------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTGC............................................................................................2318.008.00-1.001.00----3.00-------1.00-----------1.00------------------------------1.00------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGG...............................................................................................2117.007.004.001.00-1.00-----------1.00-------------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTGT............................................................................................2317.0011.001.00-1.002.00-1.00-----------1.00---------------------------------------1.00-------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGG...............................................................................................2016.006.002.00-----------2.00----------------------------------1.00-------------------------------------1.00---------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTGA............................................................................................2316.0011.003.001.00------------------------1.00---1.00----------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGT..............................................................................................2316.006.002.001.00--1.00----------------------1.00----------------------------------------------1.00--------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAG................................................................................................2016.006.001.00-3.00-----------1.00-------------------------------------------------------------------1.00------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTG.............................................................................................2416.006.00---------3.00-3.00-----------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGG...............................................................................................2215.005.003.00-----------1.00-----------------------------------------------------------------------1.00----------
.....................................................................................................................................TATGGGGAGGGTGTGAGAG..................................................................................................1915.005.00-1.002.002.00-------------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTGC............................................................................................2414.004.00-----1.00----------1.00---------1.00---------------------------------1.00----------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAA................................................................................................2014.002.00--2.00-1.00--------------------------------------1.00---------------------------------------------------
................................................................................................................................................................................TGAGCCTCTCCTCTCTCCCCACA...................................................2314.004.00-----------------1.00-----1.00-------------------------1.00--------------------1.00------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTGT............................................................................................2413.009.001.00-----------------------1.00-------------1.00--------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGCG.............................................................................................2413.005.00------3.00----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAAGATTGCTGTGGCTGCAG...........2113.003.00-3.00---------------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGCGC............................................................................................2413.007.00------2.00---------1.00------------------------------------------------------------------------------
................................................................................................................................................................................TGAGCCTCTCCTCTCTCCCCAC....................................................2213.003.00----------------------------------------------------1.00-----------------------1.00---1.00--------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGA.................................................................................................2013.003.001.00----1.00--------1.00--------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGT..............................................................................................2213.003.00---2.00------1.00------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTA.............................................................................................2412.006.002.00----------------------------------------------------------------------------------------------
............................................................................................................ACAAATCAGCCTGCTGTA............................................................................................................................182.000.00-------------2.00---------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTAT............................................................................................2412.003.00-------------------2.00---------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAG................................................................................................1912.002.001.00-------------------1.00--------------------------------------------------------------------------
............................................................................................................................................................................................................GAATGTGATGCTGAGGAA............................1812.002.00----------------------------------------1.00------------------------1.00-----------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTGA............................................................................................2412.009.00---1.001.00------------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGA.................................................................................................1912.002.00-1.001.00--------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGA.................................................................................................1812.002.002.00----------------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTGAT...........................................................................................2612.006.00-----2.00-----------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGT.................................................................................................192.000.00---------------------------------1.001.00------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTGT............................................................................................2512.006.001.00----1.00-----------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTGCCCAAAGGCCCCTAAAAGGTGAGCCTCTCCTCTCTCCCC......................................................6312.002.00-----------------------------2.00-----------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAG................................................................................................2112.002.00-----1.00-------1.00---------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTAA............................................................................................2512.006.00----------1.00--------------------1.00---------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTGCC...........................................................................................2511.001.00--1.00--------------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGCG.............................................................................................2311.007.00------1.00----------------------------------------------------------------------------------------
................................................................................CCCCCAACACACCCATT.........................................................................................................................................................171.000.00-----------------------------------------------------1.00-----------------------------------------
...........................................................................................................................................................................................................TGAATGTGATGCTGAGGAAGATTG.......................2411.001.00----------------------------------------------------------------1.00------------------------------
..............................................................................................................................................................................................................ATGTGATGCTGAGGAAGATTG.......................2111.001.00------------------------------------------------------------------------1.00----------------------
............................................................................................................................................AGGGTGTGAGAGAGGTAC............................................................................................181.000.00-------------------------------------1.00---------------------------------------------------------
............................................................................................................................................................................................................GAATGTGATGCTGAGGAAGATTGCTGTGGCTGCAG...........3511.001.00-1.00---------------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTAG............................................................................................2511.006.001.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................GGTGAATGTGATGCTGAGGAAGATT........................2511.001.00-1.00---------------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGA...............................................................................................2211.002.001.00----------------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGA..............................................................................................2211.007.00---------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGA...................................................................................................1811.001.00---------------------------------------------------------------------1.00-------------------------
...........................................................................................................................................................................................................................GAAGATTGCTGTGGCTGCAC...........201.000.00--------1.00--------------------------------------------------------------------------------------
................................................................................................................................................................................TGAGCCTCTCCTCTCTCCCCACT...................................................2311.003.00-----------1.00-----------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTGTTT..........................................................................................2611.009.00----------1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GTGAATGTGATGCTGAGGAAGATTGC......................2611.001.00-1.00---------------------------------------------------------------------------------------------
....................................................................................................................GCCTGCTCCAACTGTCGGG...................................................................................................................191.000.00-------------------------------------------------------------------------1.00---------------------
......................................................................................................................................................................................................................CTGAGGAAGATTGCTGTGGCTGGAG...........251.000.00--------------1.00--------------------------------------------------------------------------------
..............................................................................ACCCCCCAACACACCAAG..........................................................................................................................................................181.000.00------------------------------------------------1.00----------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGA...............................................................................................2111.006.00----1.00------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTGCCGA.........................................................................................261.000.00--1.00--------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................TGAATGTGATGCTGAGGA.............................1811.001.00---------------------1.00-------------------------------------------------------------------------
............................................................................................................................................................................................................GAATGTGATGCTGAGGA.............................1711.001.00---------------------------------------------------1.00-------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGG..............................................................................................2311.005.00----1.00------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTGCCC..........................................................................................2511.001.00----------------1.00------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGA..............................................................................................2311.005.001.00----------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAA................................................................................................1911.002.001.00----------------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTATT...........................................................................................2511.003.00-1.00---------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GGGTGAATGTGATGCTGAGGAAGATTGC......................2811.001.00-1.00---------------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTA.............................................................................................2311.003.00----------1.00------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TGCTGAGGAAGATTGCTGTGGCTG..............2411.001.00------------------------1.00----------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTT.............................................................................................2211.008.00-----------------------------------------1.00-----------------------------------------------------
............................................................................................................................................................................................................GAATGTGATGCTGAGGAAGATTG.......................2311.001.00-----------------------------------------------------------------------1.00-----------------------
..........................................................................................................................................................................................................................GGAAGATTGCTGTGGCTGC.............1911.001.00-1.00---------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTTT............................................................................................2311.008.00-----------------------------------------------------------1.00-----------------------------------
.............................................................................................................................................................................................................AATGTGATGCTGAGGAAGATTGCTGTGGCTGC.............3211.001.00---------------1.00-------------------------------------------------------------------------------
..........................................................................................................TCACAAATCAGCCTGATCT.............................................................................................................................191.000.00-------------------------------------------------------------------1.00---------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAAA.................................................................................................191.000.00-------------------------------1.00---------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTAG............................................................................................2411.003.00--1.00--------------------------------------------------------------------------------------------
...............................................................................................................................................................................GTGAGCCTCTCCTCTCTCCCCAG....................................................231.000.00-----1.00-----------------------------------------------------------------------------------------
...........................................................................................................................................GAGGGTGTGAGAGAGAGAC............................................................................................191.000.00--------------------------------------------------------1.00--------------------------------------
............................................................................................................ACAAATCAGCCTGCTGTAG...........................................................................................................................191.000.00-------------1.00---------------------------------------------------------------------------------
.........................................................................................................................................................................................................................AGGAAGATTGCTGTGGCTGC.............2011.001.00-1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................GATGCTGAGGAAGATTGCTGTGGC................2411.001.00-----------------------------------1.00-----------------------------------------------------------
.............................................................................................................................................................................................................AATGTGATGCTGAGGAAGA..........................1911.001.00------------------------------------------1.00----------------------------------------------------
...........................................................................................................................................................................................................................GAAGATTGCTGTGGCTGCAG...........2011.001.00--------1.00--------------------------------------------------------------------------------------
.......................................................ACACCCAGGCACCAGGCAGAGGCG...........................................................................................................................................................................241.000.00------------------1.00----------------------------------------------------------------------------
......................................................................................................................................................................................................................CTGAGGAAGATTGCTGTGGCTGCAGCGTT.......291.000.00--------------------------------------------------------------1.00--------------------------------
...............................................................................................................................................................................................................TGTGATGCTGAGGAAGA..........................1711.001.00------------------------------------------------------1.00----------------------------------------
......................................................................................................................................................................................TCTCCTCTCTCCCCACAGGGGTA.............................................231.000.00-------------------------------------------------------------1.00---------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTGGC...........................................................................................2511.009.00-----------------------------------------------------------------------------------1.00-----------
.........................................................................................................................................................................................................................AGGAAGATTGCTGTGGCTGCAGCGT........2511.001.00-------1.00---------------------------------------------------------------------------------------
................................................................................................................................................................................TGAGCCTCTCCTCTCTCCCCACCA..................................................2411.003.001.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................GATGCTGAGGAAGATTGC......................1811.001.00--------------------------------------------------------------------1.00--------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGAA.............................................................................................2211.006.00--1.00--------------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGCGCC...........................................................................................2611.005.00------1.00----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AATGTGATGCTGAGGAAGATTG.......................2211.001.00-------------------------------------------------------------------------------1.00---------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGCGC............................................................................................2511.005.00------1.00----------------------------------------------------------------------------------------
................................................................................................................................................................................TGAGCCTCTCCTCTCTCCCCA.....................................................2111.001.00------------------------------------1.00----------------------------------------------------------
..........................................................................................................................................................................................................................GGAAGATTGCTGTGGCTGCAGCGT........2411.001.00------------------------------1.00----------------------------------------------------------------
............................................................................................................................................................................................................GAATGTGATGCTGAGGAAGA..........................2011.001.00-1.00---------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTGAT...........................................................................................2411.0011.00----1.00------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGA...............................................................................................2011.002.001.00----------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CTGAGGAAGATTGCTGTGGCTGCAG...........2511.001.00------------------------------------------------------------------1.00----------------------------
.............................................................AGGCACCAGGCAGATGCACAGTT......................................................................................................................................................................231.000.00------------------1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................................GTGAATGTGATGCTGAGGAAGATTGCTGTGG.................3111.001.00---------------------------------------------------------------------------1.00-------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTGCCC..........................................................................................2711.001.00---------------------------------------------1.00-------------------------------------------------
........................................................................................................................................................................................................................GAGGAAGATTGCTGTGGCTGCAG...........2311.001.00----1.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AATGTGATGCTGAGGAAGATTGCTGTGGCTGCA............3311.001.00-1.00---------------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTGATA..........................................................................................2711.006.001.00----------------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGGG.............................................................................................2311.007.00----------------------------------------------1.00------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAAA...............................................................................................2111.002.00--------------------------------------------1.00--------------------------------------------------
............................................................................................................................................................................................................................AAGATTGCTGTGGCTGCGCAA.........211.000.00-------------------------------------------------------1.00---------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTGCAA..........................................................................................2611.004.00--------------------------------------------------1.00--------------------------------------------
...........................................................................................................................................................................................................................GAAGATTGCTGTGGCTG..............1730.670.67--------0.33--------------------------------------------------------------------------------0.33-----
.................................................................................................................................................................................................................TGATGCTGAGGAAGATTG.......................1820.500.50--------0.50--------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................CTGTGGCTGCAGCGTCC......1720.500.50---------------------------------------------------------------------------------------0.50-------
......................................................................................................................................................................................................................CTGAGGAAGATTGCTG....................1620.500.50--------0.50--------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAG....................................................................................................1740.250.25--------------------------------------------------------------------------------------------0.25--
.......................................................................................................................................................................................................................TGAGGAAGATTGCTG....................1560.170.17-----------------0.17-----------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGA...................................................................................................1690.110.110.11----------------------------------------------------------------------------------------------

Antisense strand
CCCCTCATCTTTCAGGGCTGCACCGCCTACCGTCTCCTTCAAGGCACTTTCTTAGACACCCAGGCACCAGGCAGATGCACCCCCCAACACACCCACCCCAAGCAAGTCACAAATCAGCCTGCTCCAACTGTCTTATGGGGAGGGTGTGAGAGAGGTGCCCAAAGGCCCCTAAAAGGTGAGCCTCTCCTCTCTCCCCACAGGGGTGAATGTGATGCTGAGGAAGATTGCTGTGGCTGCAGCGTCCAAGCCA
.......................................................................................................................................(((((((((.....((((((((((....))).((.....))...)))))))..))))))))).....................................................
..................................................................................................................................131..................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR189786SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577579(Rovira)
total RNA. (breast)		SRR189782SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189784SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189787SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)		GSM532874(GSM532874)
G699T. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		SRR040041(GSM532926)
G612T. (cervix)		SRR040014(GSM532899)
G623N. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR343335SRR040011(GSM532896)
G529T. (cervix)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR040009(GSM532894)
G727T. (cervix)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040010(GSM532895)
G529N. (cervix)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR040027(GSM532912)
G220T. (cervix)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR040035(GSM532920)
G001T. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189783GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029131(GSM416760)
MCF7. (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
.....................................................................................AACACACCCACCCCATGT................................................................................................................................................... 181.000.00---------------------------------------------------------------------------------1.00-------------
.........................................................................................................................................................................................................................................CTGCAGCGTCCAAGCAAT 181.000.00---1.00-------------------------------------------------------------------------------------------
.....................................................................................AACACACCCACCCCATAT................................................................................................................................................... 181.000.00-----------------------------------------------------------------------------1.00-----------------
..................................................................................CCCAACACACCCACCCCATA.................................................................................................................................................... 200.500.00--------------------------------------------------------------------------------------0.50--------
..................................................................................CCCAACACACCCACCCCATGAA.................................................................................................................................................. 220.500.00----------------------------------------------------------------------------------------0.50------
..................................................................................CCCAACACACCCACCCCA...................................................................................................................................................... 1820.500.50---------------------------------------------------------------0.50-------------------------------
..................................................................................CCCAACACACCCACCCCAAAAG.................................................................................................................................................. 220.500.00--------------------------------0.50--------------------------------------------------------------
..................................................................................CCCAACACACCCACCCCATTGG.................................................................................................................................................. 220.500.00---------------------------------------------------------------0.50-------------------------------
..................................................................................CCCAACACACCCACCCCATGTG.................................................................................................................................................. 220.500.00--------------------------------0.50--------------------------------------------------------------
..................................................................................CCCAACACACCCACCCCATGGG.................................................................................................................................................. 220.500.00--------------------------------0.50--------------------------------------------------------------
.........................................................................................................................................................................................................................................CTGCAGCGTCCAAG... 1490.330.33--------0.11------------------------------------------------------------------------------------0.110.11
...........................................................................................................................................................................................................................................GCAGCGTCCAAGCCA 1530.330.33------------------------------------------------------------------------------------------0.33----
...................................................................................CCAACACACCCACCCCA...................................................................................................................................................... 1740.250.25-------------------------------------------------------------------------------------------0.25---