ID: uc001eto.1
GENE: CEZANNE(1)
chr1:149937754-149938003-


(2)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(4)
AGO2.ip 		(1)
AGO3.ip 		(9)
B-CELL 		(9)
BRAIN 		(19)
BREAST 		(47)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(9)
HEART 		(4)
HELA 		(5)
LIVER 		(3)
OTHER 		(2)
RRP40.ip 		(44)
SKIN 		(1)
TESTES 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
TACTCACTGATCTAACCAATTGTGCTCACAAGATTCTGACTGACTAGATATAAGTGAGGAAGATATAAAGAGTAATCAAGTGATGGTTTTATTCTGGGTAGGCCTCCTAGAGGAGGCTGCTTTGGAGTCTGTTTCAGAAATAGGAAGGTGGAAGGGCTTCATGGATAATCTCCTTTTCCTCCACTATCTTGTTTCTACAGGGCGTTTGAACTGGTGGGTGAGTGTGGATCCCACCTCTCAGAGGCTGCTT
................................................................................................................................((((...((((((((((.(((((.((((......(((.....)))...))))))))).))))))))))))))..................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR038863(GSM458546)
MM603. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038853(GSM458536)
MELB. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577739(Rovira)
total RNA. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		TAX577740(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038862(GSM458545)
MM472. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR038855(GSM458538)
D10. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577742(Rovira)
total RNA. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR189784SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040015(GSM532900)
G623T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGGG..............................................................................................231119.00119.0034.0012.0015.003.00-1.003.00-3.002.00-1.004.002.002.00--5.001.001.001.001.00---1.001.00----1.00----1.001.00-2.001.00--------2.00-1.001.001.00-1.00--2.00---------------1.00-----1.00-1.00--1.002.00-----------1.00-------------1.00----1.00-------------------1.00----------1.00--1.00-----
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGG...............................................................................................221113.00113.0025.007.008.003.00-3.003.003.001.004.002.002.004.001.001.002.00---2.00-1.00--2.002.001.00--1.00-1.001.00----1.00--1.00-1.00---1.00-1.00-3.00--1.001.001.00---2.00-1.00---1.001.00----1.00-1.00-------2.00-----1.00-1.00--1.001.001.00-----1.00--1.00----1.00---------1.00-------1.00-----------1.00----1.00------1.00------
......................................................................................................................................CAGAAATAGGAAGGTGGAAGGG..............................................................................................22144.0044.00-3.0024.001.00-2.00--1.002.00-1.00----------------------------------1.001.001.00---2.00----1.00----1.00---------------2.00----------------------------------1.00-------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAG................................................................................................21143.0043.001.00--4.001.004.00---1.00-3.00-1.002.002.00--2.00--1.001.00----2.001.00-----------1.002.00--1.00-1.001.00------1.00--1.00----1.00---1.001.00--1.00------------------1.00---------------1.00--------------------------1.00-1.00------1.00---------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAGG...............................................................................................23134.0034.003.008.001.00-1.001.004.00---2.00--1.00--------------1.001.00------1.00-3.00------------1.00----1.00-------1.00-------------------------1.00------1.00---------1.00--------------------------------1.00----------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGGA..............................................................................................23129.00113.003.00---3.001.00-1.004.001.00-1.00--1.00-----------1.00---1.00--------1.00-----------1.00----2.00-1.001.00----1.00---1.00------------------1.001.00-1.00-------------------------1.00----------------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAG................................................................................................22128.0028.00-5.009.003.001.00--1.001.00-1.00---------1.00------1.00------1.00-----------------------------------------1.00--------1.00---------------------------------1.00-------------------1.00-----------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGGGA.............................................................................................24120.00119.006.00---------1.00-----------------1.00--1.00--2.004.00--------2.001.00---------------------------------------------------------------1.00------------1.00----------------------------------
......................................................................................................................................CAGAAATAGGAAGGTGGAAGGGT.............................................................................................23118.0044.00-9.00-----------------------1.00-----------1.00----------------1.00--1.00---1.00---------------1.00----1.00-------------------1.00------------------------1.00-----------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAA.................................................................................................20118.0018.004.00-1.002.00------------6.00---1.00---1.00-------------------------------------------------------------------1.00-----------------------------------1.00-------1.00--------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGGGT.............................................................................................24117.00119.004.005.00-1.00---1.00-------------1.00-------------------1.001.00------------------------1.00-----------------------1.00---1.00-------------------------------------------------------------
......................................................................................................................................CAGAAATAGGAAGGTGGAAGG...............................................................................................21116.0016.00---4.003.00-4.00-----------------------------2.00------1.00----------------------------------------------------------------------------1.00---------------------1.00--------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAGGA..............................................................................................24112.0034.00-1.00-1.00-----1.001.00---1.00---2.00---------------1.00---------------------------------1.00-----1.001.00-----------------------------------------------------------1.00---------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGGT..............................................................................................2319.00113.00--1.002.00----1.00--------------------------------------1.00-------------------------------1.00------------------------------1.00---------------------------------1.00--1.00---------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAGGG..............................................................................................2419.009.00----4.00-------1.001.00-------------------------------1.00------------------------1.00------------------------------1.00-------------------------------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAA.................................................................................................2119.009.00----1.00-----1.00------------5.00-----------------------------------------------------------------------1.00----------------------------1.00--------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAGGT..............................................................................................2418.0034.002.00-1.001.00---------1.00--------1.00----------------------------------------------------1.00-----------------1.00---------------------------------------------------------------
...................................................................................................................................TTTCAGAAATAGGAAGGTGGAA.................................................................................................2217.007.00-7.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGA...............................................................................................2216.0043.00--------1.00---------1.00-----------------------------1.00---------------------------------------1.00----------1.00-----------1.00---------------------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAGA...............................................................................................2316.0028.00---2.003.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................CAGAAATAGGAAGGTGGAAGGGA.............................................................................................2315.0044.00-4.00-------------------------------------------------------------------------------------------------------------------------------1.00---------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGA..................................................................................................1915.005.00-------1.00------------2.00------1.00----1.00----------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................CAGAAATAGGAAGGTGGAAG................................................................................................2015.005.00-------4.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................CAGAAATAGGAAGGTGGAAGGGC.............................................................................................2314.004.001.00---2.00------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGGGATC...........................................................................................2614.00119.00---------------------------------4.00---------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................TTTCAGAAATAGGAAGGTGGAAG................................................................................................2314.004.00---1.00-----2.001.00--------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................CAGAAATAGGAAGGTGGAAGGT..............................................................................................2214.0016.00---2.00-1.00-----------------------------------------------------------------------1.00-------------------------------------------------------------------------------
......................................................................................................................................CAGAAATAGGAAGGTGGAAGGA..............................................................................................2214.0016.00--2.00--2.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGGTA.............................................................................................2413.00113.00---2.00-----------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAAA...............................................................................................2213.0018.00------------------------------------------1.00-----------------------------2.00------------------------------------------------------------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAGGGT.............................................................................................2513.009.00-1.00-----------------------------------------------------------------------1.00--------------------------------------------------------1.00--------------------------
.......................................................................................................................................AGAAATAGGAAGGTGGAAGGGCTT...........................................................................................2413.003.00----------------------3.00--------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGGAA.............................................................................................2413.00113.00----3.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAGGTA.............................................................................................2513.0034.00---2.00------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................AAGTGATGGTTTTAT..............................................................................................................................................................1503.003.00------------------------------------------------------------3.00------------------------------------------------------------------------------------------------
.......................................................................................................................................AGAAATAGGAAGGTGGAAGGGTAT...........................................................................................243.000.00-------3.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGGAG................................................................................................2112.002.00--------------------------------1.00-----------------------------------------------------------------------------------------------------------------1.00----------
....................................................................................................................................TTCAGAAATAGGAAGGTGGA..................................................................................................2012.002.00------------------------1.00------------------------------------------------------1.00-----------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGG...................................................................................................1812.002.00-------------------------------------------------------------1.00---------------------------------------------------------------------1.00-------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAA................................................................................................2212.009.00----1.00--------------------------------------------------------------------------------------------------------------------1.00-----------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGGGTT............................................................................................2512.00119.00-------------------1.00-------------------------------------------------1.00---------------------------------------------------------------------------------------
.......................................................................................................................................AGAAATAGGAAGGTGGAAGGTAT............................................................................................2312.001.00---2.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGGGAT............................................................................................2512.00119.00------------1.00---------------------------------------------------------------------------------1.00--------------------------------------------------------------
......................................................................................................................................CAGAAATAGGAAGGTGGAAGGGTT............................................................................................2412.0044.001.00--------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGT...............................................................................................2212.0043.00------------------------------1.00------1.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAA................................................................................................2112.0018.00-------------------------------------------------------------------------------------------------------------------------------------1.00-----------1.00-----------
.............................................................................................................................................AGGAAGGTGGAAGGGCTTCATG.......................................................................................2212.002.00---2.00---------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................CAGAAATAGGAAGGTGGAA.................................................................................................1921.501.50------0.50--------0.50----------------------------------------------------------------------------------------------------------------------------------------0.50----
.....................................................................................................................................TCAGAAATAGGAAGGTGGCAGG...............................................................................................2211.002.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................CAGAAATAGGAAGGTGGTAGG...............................................................................................211.000.00-------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGTG..............................................................................................2311.0043.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TGAACTGGTGGGTGAGTGTGGA......................2211.001.00----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................TCCTCCACTATCTTGTTTCT......................................................2011.001.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CTCCACTATCTTGTTTCTCCAG..................................................221.000.00----------------------------------------------------------------------------------------------------------1.00--------------------------------------------------
.......................................................................................................................................AGAAATAGGAAGGTGGAAGG...............................................................................................2011.001.00---------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAGGGA.............................................................................................2511.009.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGACGG...............................................................................................2311.002.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................TTTCAGAAATAGGAAGGTGGAAGA...............................................................................................2411.004.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................GTTTCAGAAATAGGAAGGTGGAAGG...............................................................................................2511.001.00-----------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGGAT.............................................................................................2411.00113.00-------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.......................................................................................................CTCCTAGAGGAGGCTGCTTTGGAT...........................................................................................................................241.000.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGGGTGAGTGTGGATCCC..................1811.001.00------------------------------------------------------------------------------------------------1.00------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGGGAAA...........................................................................................2611.00119.00-------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TGAACTGGTGGGTGAGTGTGGATC....................2411.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAGGTAT............................................................................................2611.0034.00---------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAGGT...............................................................................................2211.005.00------------------------------------------------------------------------------------------------------------------1.00------------------------------------------
......................................................................................................................................CAGAAATAGGAAGGTGGAAGGGTA............................................................................................2411.0044.00-------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAGT...............................................................................................2311.0028.00--------------------------------------------------------------------------------1.00----------------------------------------------------------------------------
...................................................................................................................................................................................................................................ATCCCACCTCTCAGAGCA.....181.000.00-------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
..................................................................................................................................................................................CTCCACTATCTTGTTTCTACAG..................................................2211.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAAGGGG.............................................................................................2411.00119.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CACTATCTTGTTTCTACA...................................................1811.001.00------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
..................................TCTGACTGACTAGATATAAGTG..................................................................................................................................................................................................2211.001.00-----------------------------------------------------------------------------------1.00-------------------------------------------------------------------------
.......................................................................................................................................AGAAATAGGAAGGTGGAAGGGTT............................................................................................231.000.00--------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GTGAGTGTGGATCCCGGAG..............191.000.00-----------------------------------------------------------------------------------------------------------------------------1.00-------------------------------
.........................................................................AATCAAGTGATGGTTGTCT..............................................................................................................................................................191.000.00----------------------------------------------------------------------------1.00--------------------------------------------------------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGTAG................................................................................................2111.002.00--------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTCTACAGGGCGTTTGAACTCTG...................................231.000.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAGGAT.............................................................................................2511.0034.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAAA...............................................................................................2311.009.00---------------------------------------------------------------------------------------------------------------------------1.00---------------------------------
.....................................................................................................................................TCAGAAATAGGAAGGTGGAATGGT.............................................................................................2411.0018.00------------------------------------------------------------------------------------1.00------------------------------------------------------------------------
..........................................................................................................................................AATAGGAAGGTGGAAGGGCA............................................................................................201.000.00---------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
................................................................................................................................................................................................................AACTGGTGGGTGAGTGTG........................1811.001.00---------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAGGGAT............................................................................................2611.009.00-------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
......................................................................................................................................CAGAAATAGGAAGGTGGAAGGGTAA...........................................................................................2511.0044.00-----------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAGGAA.............................................................................................2511.0034.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GGGCGTTTGAACTGGTGGGTGAG............................2311.001.00-----------------------------------------------------------------------------------1.00-------------------------------------------------------------------------
.......................................................................................................................................AGAAATAGGAAGGTGGAAGGGT.............................................................................................221.000.00------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................GATCCCACCTCTCAGAGGCTGCTTCCTC281.000.00--------------------------------------------------------------------------------------------------------1.00----------------------------------------------------
.......................................................................................................................................AGAAATAGGAAGGTGGAAGGGGAT...........................................................................................241.000.00-----------------------------------------------------------------------------------------------------------------------------------------------------1.00-------
...................................................................................................................................................................................TCCACTATCTTGTTTCTACAG..................................................2111.001.00-------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------
....................................................................................................................................TTCAGAAATAGGAAGGTGGAAGC...............................................................................................2311.0028.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................TTGGAGTCTGTTTCAGAAATAGGAAGGTGGA..................................................................................................3111.001.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................TAGGAAGGTGGAAGGGCTT...........................................................................................1920.500.50---------------------------------------------------------------0.50---------------------------------------------------------------------------------------------
............................................................................................................................................TAGGAAGGTGGAAGGGCTTC..........................................................................................2020.500.50----------------------------------------------------------------------------------------------------------------------------------------------------------0.50--
........................................................................................................................................GAAATAGGAAGGTGGAAG................................................................................................1820.500.50---------------------------------------------------------------------------------------------------------------------------------------------------------0.50---
..............................................................................AGTGATGGTTTTATTC............................................................................................................................................................1640.250.25-----------------------------------------------------------------------------------------------------------------------------------------------------------0.25-
..................................................................................................................................................GGTGGAAGGGCTTCA.........................................................................................1570.140.14------------------------------------------------------------------------------------------------------------------------------------------------------------0.14

Antisense strand
TACTCACTGATCTAACCAATTGTGCTCACAAGATTCTGACTGACTAGATATAAGTGAGGAAGATATAAAGAGTAATCAAGTGATGGTTTTATTCTGGGTAGGCCTCCTAGAGGAGGCTGCTTTGGAGTCTGTTTCAGAAATAGGAAGGTGGAAGGGCTTCATGGATAATCTCCTTTTCCTCCACTATCTTGTTTCTACAGGGCGTTTGAACTGGTGGGTGAGTGTGGATCCCACCTCTCAGAGGCTGCTT
................................................................................................................................((((...((((((((((.(((((.((((......(((.....)))...))))))))).))))))))))))))..................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR038863(GSM458546)
MM603. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038853(GSM458536)
MELB. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577739(Rovira)
total RNA. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		TAX577740(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038862(GSM458545)
MM472. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR038855(GSM458538)
D10. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577742(Rovira)
total RNA. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR189784SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040015(GSM532900)
G623T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
.......................................................................................................................................................................ATCTCCTTTTCCTCCAGTT................................................................ 191.000.00--------------------------------------------------------------1.00----------------------------------------------------------------------------------------------
.......................GCTCACAAGATTCTGACTGACTAGA.......................................................................................................................................................................................................... 2511.001.00------------------------------------------------------------------------------------1.00------------------------------------------------------------------------