(1) AGO2.ip | (1) BREAST | (10) CELL-LINE | (2) CERVIX | (1) HELA | (1) LIVER | (5) OTHER | (12) SKIN | (1) TESTES | (1) XRN.ip |
CGAGCAGTATCTAAAGAGTTTTAGTACTCTGAAAACAACAGCAGCAATAAGTACTAATATTGAAAGTGTTTATGATATCGTGAGAGAATTAAAGCATACTACTTCTAGAACAGTTATTTCAATAATTACTAGAGAACTAGTCGTTTTGGTAAAGTTGGTTTAAAGTGATGACATGTATCTTCCTTGACCATCCTTATCAGATATTATTTTCCTAGAAGCAAGTCTGCTGTCCTTCATGCACAGTCTTCAT ..................................................................................................................................................((((((...(((((......((((.....))))......)))))...))))))................................................... ............................................................................................................................................141........................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189782 | SRR189783 | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR553576(SRX182782) source: Testis. (testes) | DRR001485(DRX001039) Hela long total cell fraction, LNA(+). (hela) | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR189784 | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR037935(GSM510473) 293cand3. (cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR037936(GSM510474) 293cand1. (cell line) | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR040041(GSM532926) G612T. (cervix) | SRR330884(SRX091722) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330858(SRX091696) tissue: skin psoriatic involveddisease state:. (skin) | SRR015447(SRR015447) nuclear small RNAs. (breast) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330877(SRX091715) tissue: skin psoriatic involveddisease state:. (skin) | SRR189787 | SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin) | SRR326282(GSM769512) Dicer mRNA was knocked down using siDicer, to. (cell line) | SRR189785 | SRR037938(GSM510476) 293Red. (cell line) | SRR330888(SRX091726) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR040035(GSM532920) G001T. (cervix) |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
...................................................................................................................................................................................TTCCTTGACCATCCTTATCAG.................................................. | 21 | 1 | 105.00 | 105.00 | 79.00 | 22.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
...................................................................................................................................................................................TTCCTTGACCATCCTTATCAGT................................................. | 22 | 1 | 71.00 | 105.00 | 46.00 | 2.00 | 7.00 | - | - | - | 1.00 | - | 3.00 | - | - | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | 1.00 | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | 1.00 | 1.00 | - |
...................................................................................................................................................................................TTCCTTGACCATCCTTATCA................................................... | 20 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
...................................................................................................................................................................................TTCCTTGACCATCCTTATCAGA................................................. | 22 | 1 | 6.00 | 6.00 | 1.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
...........................................................................................................................................GTCGTTTTGGTAAAGTTGGTTTAAAGTGATGACATGTATCTTCCTTGACCATCCTTATCAG.................................................. | 61 | 1 | 5.00 | 5.00 | - | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
.................................................................................................................................................TTGGTAAAGTTGGTTTAAAGTGA.................................................................................. | 23 | 1 | 4.00 | 4.00 | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
...................................................................................................................................................................................TTCCTTGACCATCCTTATC.................................................... | 19 | 1 | 4.00 | 4.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
............................................................................................................................................................................................................TATTTTCCTAGAAGCAAGTCTGTTTG.................... | 26 | 3.00 | 0.00 | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
.................................................................................................................................................TTGGTAAAGTTGGTTTAAAGTGAT................................................................................. | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
....................................................................................................................................................................................TCCTTGACCATCCTTATCAG.................................................. | 20 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
................................................................................................................................................................TAAAGTGATGACATGCAG........................................................................ | 18 | 2.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
...........................TCTGAAAACAACAGCAGCAATAAGTAC.................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
......................................................................................................................................AACTAGTCGTTTTGGTGCG................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
.................................AACAACAGCAGCAATAAGTACTAAT................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
...................................................................................................................................................................................TTCCTTGACCATCCTTATCAT.................................................. | 21 | 1 | 1.00 | 6.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
........................................................................................................................................CTAGTCGTTTTGGTAAAGTTGGTTTAAAGTGATGACATGTATCTTCCTTGACCATCCTTATCAG.................................................. | 64 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
.......................................................................................................................................................................................................................AAGCAAGTCTGCTGTCCTTCACTC........... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
.......................................................................................................................................................................................TTGACCATCCTTATCAGT................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
..................................................................................................................................................................................CTTCCTTGACCATCCTTATCAG.................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
.................................................................................................................................................TTGGTAAAGTTGGTTTAAAGT.................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
...........................................................................................................................................................................CATGTATCTTCCTTGACCATCCTTATCAG.................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
...................................................................................................................................................................................TTCCTTGACCATCCTTATCAGG................................................. | 22 | 1 | 1.00 | 105.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
...........................TCTGAAAACAACAGCAGCAATAAGTACTA.................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
...................................................................GTTTATGATATCGTGAGAGAATTAAAGC........................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
...................................................................................................................................................................................TTCCTTGACCATCCTTAGCA................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
....................................................................................................................................................................................TCCTTGACCATCCTTATCAGT................................................. | 21 | 1 | 1.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
...................................................................................................................................................................................TTCCTTGACCATCCTTATCAA.................................................. | 21 | 1 | 1.00 | 6.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
...................................................................................................................................................................................TTCCTTGACCATCCTTATCAGC................................................. | 22 | 1 | 1.00 | 105.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
........................TACTCTGAAAACAACAGCAGC............................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
...................................................................................................................................................................................TTCCTTGACCATCCTTATTAG.................................................. | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
.....................................................................................................................................................................................................................AGAAGCAAGTCTGCTGTCCTTCAT............. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
................................................................................................................................................TTTGGTAAAGTTGGTTTAAAGT.................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
......................................................................................................................................................................................CTTGACCATCCTTATCAG.................................................. | 18 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
CGAGCAGTATCTAAAGAGTTTTAGTACTCTGAAAACAACAGCAGCAATAAGTACTAATATTGAAAGTGTTTATGATATCGTGAGAGAATTAAAGCATACTACTTCTAGAACAGTTATTTCAATAATTACTAGAGAACTAGTCGTTTTGGTAAAGTTGGTTTAAAGTGATGACATGTATCTTCCTTGACCATCCTTATCAGATATTATTTTCCTAGAAGCAAGTCTGCTGTCCTTCATGCACAGTCTTCAT ..................................................................................................................................................((((((...(((((......((((.....))))......)))))...))))))................................................... ............................................................................................................................................141........................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189782 | SRR189783 | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR553576(SRX182782) source: Testis. (testes) | DRR001485(DRX001039) Hela long total cell fraction, LNA(+). (hela) | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR189784 | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR037935(GSM510473) 293cand3. (cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR037936(GSM510474) 293cand1. (cell line) | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR040041(GSM532926) G612T. (cervix) | SRR330884(SRX091722) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330858(SRX091696) tissue: skin psoriatic involveddisease state:. (skin) | SRR015447(SRR015447) nuclear small RNAs. (breast) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330877(SRX091715) tissue: skin psoriatic involveddisease state:. (skin) | SRR189787 | SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin) | SRR326282(GSM769512) Dicer mRNA was knocked down using siDicer, to. (cell line) | SRR189785 | SRR037938(GSM510476) 293Red. (cell line) | SRR330888(SRX091726) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR040035(GSM532920) G001T. (cervix) |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
................................................................................................................................................................................................CTTATCAGATATTATTCC........................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | |
..................................................................................................................................................................................CTTCCTTGACCATCCTTATCAGATA............................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
..........................................................................................................................................................................................ACCATCCTTATCAGATATTATTTTCCTA.................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
..............................................................................................................................................................TTTAAAGTGATGACAATTG......................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
..................................................................................................................................................................................................................CCTAGAAGCAAGTCTGCTGTCCTTCAT............. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
..............................................................................................................................................................................GTATCTTCCTTGACCATCTG........................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
................................................................................................TACTACTTCTAGAACAGTTATTTCAATA.............................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
.............................................................................................................................................................................................ATCCTTATCAGATATTATTTTCCTA.................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
..........................................................................................................................................................................................ACCATCCTTATCAGATATTATTTTCCTAA................................... | 29 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
............................................................................................................................................................................ATGTATCTTCCTTGACCATCCTTATCA................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |