ID: uc001bqa.8
GENE: SNHG3-RCC1(8)
chr1:28861843-28862432+


(2)
AGO2.ip
(6)
B-CELL
(1)
BRAIN
(5)
BREAST
(31)
CELL-LINE
(1)
CERVIX
(4)
HEART
(3)
HELA
(2)
LIVER
(2)
OTHER
(9)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
AGGCCGTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGGCCTCGGTAAGTGGCCTTGGTACCTCCAGCAGGGCAAATTGGCAGGCCACCCCCACAGTGAAGGCCAAAGGCAGGAAGGATTTGCTGTGGTCAGGCTTGCATCAGATGGGCTTGTGGTGTTGGTTAGGACTTTGGAGACAGACTGCTCTGGTAGTTTTGCCACCTACTGTCTATGGGACTCTGAACATAGTTTCTTCATCACTAAGTCTACCTACCTGTAAACCTACTTCATTAGGTTGCTGTGAAGTTAAATGAGTTAATGAGAAGAATATCAGGCAGATGGTAAGTTCCACGTAAATGATACCCGTAATGACTGTGGGAATCTGAGCAAGGCACTTGTATTCTCTTGATCTCAGTTTCCTTTTCTATAAAATAGGGATAAGAGTCCCTACTTAGCCTCTCAAGGGCTTTTATAATGGAGGAGAATTAAACTCGGGGCAGAGAGAAGCCATGTGTGTCTGTCTGTCACTGACCGTGGCTTTCCCTTTGCCTGCAGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGAAATCCAGGGGAAGCCGG
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................((((((((.(((((((((...(((.((.....)).))))))))))))..))))))))......................................................
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................474...............................................................540................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR189786SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR189783SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR029131(GSM416760)
MCF7. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR189787SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR038858(GSM458541)
MEL202. (cell line)
SRR189785SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR189784SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
TAX577453(Rovira)
total RNA. (breast)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191418(GSM715528)
40genomic small RNA (size selected RNA from t. (breast)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR029130(GSM416759)
DLD2. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR343334SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGAGAGAAGCCATGTGT..........................................................................................23126.0026.006.003.00----1.004.004.002.00------2.00------1.001.00---------1.00-----------------1.00-------------------
.......................................................................................................................................................................................................................TATGGGACTCTGAACTCTG....................................................................................................................................................................................................................................................................................................................................................................198.000.00--------------2.00---2.001.00--------------------1.00---------1.00-----------------1.00---
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGCTTTCCCTTTGCCTGCAGT.................................................2416.003.00---6.00--------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGAGAGAAGCCATGTG...........................................................................................2215.005.00------1.00--------1.00------------1.00----1.00---1.00----------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGGCTTTCCCTTTGCCTGCAGT.................................................255.000.00-4.00---------------1.00------------------------------------------------------
.........................................................................................................................GGATTTGCTGTGGTCAGGCTTGCATCAGATGGGCTTGTGGTGTTGGTTAGGACTTTGGAGACAGA....................................................................................................................................................................................................................................................................................................................................................................................................................6514.004.00----4.00-------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGCTTTCCCTTTGCCTGCAG..................................................2313.003.00-----------1.00-------1.00-----------------------------------------------1.00----
......................................................................................................................................................................................................................CTATGGGACTCTGAACTCTG....................................................................................................................................................................................................................................................................................................................................................................203.000.00------------------------------1.00------------1.00---------------1.00------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGAATTAAACTCGGGGCAGAGA......................................................................................................2713.003.00-------------3.00----------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGAGAGAAGCCATGTGTG.........................................................................................2412.002.00------------------------1.00--------------------------1.00--------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGGCAGAGAGAAGCCATGT............................................................................................2212.002.00----------1.00----------------------------------------------------1.00--------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGTGATGCTGAAATC.............1912.002.00--------------------2.00---------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGAGAGAAGCCATGTGAAA........................................................................................2512.005.00----------2.00-------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGAGAGAAGCCATGT............................................................................................2112.002.00----------------------1.00--1.00----------------------------------------------
.....................................................................................................................................................................................ACAGACTGCTCTGGTGCCC......................................................................................................................................................................................................................................................................................................................................................................................................192.000.00---------------------2.00--------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGAGAGAAGCCATGTGTGTC.......................................................................................2612.002.00-----------------------------------------1.00------------------------1.00-----
......................................................................................................................................................................................................................................................TAAGTCTACCTACCTGTAAACCTACTTCATT.........................................................................................................................................................................................................................................................................................................................3112.002.00--------------------------2.00---------------------------------------------
.....................................................................................................................................................................................ACAGACTGCTCTGGTGC........................................................................................................................................................................................................................................................................................................................................................................................................172.000.00---------------1.00--------------------------1.00-----------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGAGAGAAGCCATGTGTGTCT......................................................................................2712.002.00-----------2.00------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGAGAGAAGCCATGTGA..........................................................................................2312.005.00----------------------1.00-----1.00-------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGAGAGAAGCCATGTGG..........................................................................................2311.005.001.00-----------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................GTGGGAATCTGAGCAAGGCACTTGT..............................................................................................................................................................................................................2511.001.00---------------------------1.00--------------------------------------------
.......................CCAACCGTGGTGGCCGGCAAGGCCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00------------------------------------------------------------1.00-----------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGGCAGAGAGAAGCCATGTG...........................................................................................2311.001.00------1.00-----------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAATTAAACTCGGGGCAGAGAG.....................................................................................................2611.001.00-------------------------1.00----------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGAGAGAAGCCATGTGC..........................................................................................2311.005.00-----1.00------------------------------------------------------------------
............................................................................................................................................TTGCATCAGATGGGCTCGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-------------------------------------------------1.00----------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGGCTTTCCCTTTGCCTGCAT..................................................241.000.00---------1.00--------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGGCAGAGAGAAGCCATGCGT..........................................................................................2411.001.00-----1.00------------------------------------------------------------------
..................................................................................................................................................................................GAGACAGACTGCTCTTGG..........................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------------------------1.00----------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGCTTTCCCTTTG.........................................................1611.001.00-----------------------------1.00------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGGCTTTCCCTTTGCCTGCCT..................................................241.000.00----------------------------------------------------------------1.00-------
...........................................................................................................................................................................GACTTTGGAGACAGACTGCTCTGGG..........................................................................................................................................................................................................................................................................................................................................................................................................251.000.00--------------------------------------------------------1.00---------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACTCCTGGTCCCCAAGTGTGTGATGCTGAA................3311.001.00------------1.00-----------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTTTCCCTTTGCCTGCAGTT................................................231.000.00-----------------------------------------------------------------1.00------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGGCAGAGAGAAGCCACGT............................................................................................221.000.00-----1.00------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGAGAGAAGCCATGCGT..........................................................................................2311.001.00-----1.00------------------------------------------------------------------
.......................................................................................................................................................GGGCTTGTGGTGTTGCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00---------------------------------------1.00--------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGAGAGAAGCCATG.............................................................................................2011.001.00-----------------------------------------------1.00------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGCTTTCCCTTTGCCTGCAGA.................................................2411.001.00--------------------------------------1.00---------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTGGTCCCCAAGTGTGTGATGCTG..................2711.001.00------------1.00-----------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGGCAGAGAGAAGCCCTG.............................................................................................211.000.00---------------------------------------------------------1.00--------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTGAAATCCAGGGGCGCG...211.000.00------------1.00-----------------------------------------------------------
..............................................................................................................................................GCATCAGATGGGCTTTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.001.00-----------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGAGAGAAGCCATGTGTT.........................................................................................2411.0026.00-------------------------------1.00----------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................CAAGGCACTTGTATTGCA........................................................................................................................................................................................................181.000.001.00-----------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGCTTTCCCTTTGCCTGCAGTAA...............................................2611.003.00------1.00-----------------------------------------------------------------
....................................................................................................................................................................................................................................................................TGTAAACCTACTTCAATAG.......................................................................................................................................................................................................................................................................................................................191.000.00--------------------------------1.00---------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAGAGAGAAGCCATGTGTG.........................................................................................2211.001.00--------------------------------------------1.00---------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTCGGGGCAGAGAGAAGC.................................................................................................2211.001.00---------------------------------------------1.00--------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTTTTCTATAACAA............................................................................................................................................................................181.000.00------------------------------------------------1.00-----------------------
........................................................................................................................................................................................................................................................................................................................................AAGTTCCACGTAAATATTT...................................................................................................................................................................................................................................................191.000.00--1.00---------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGGCAGAGAGAAGCCATG.............................................................................................2111.001.00----------------------------------------------------------1.00-------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGTGGCTTTCCCTTTGGAC......................................................211.000.00-----------------------1.00------------------------------------------------
..............AGTTATTTGCCAACCGTGGTGGCCGGCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00-----------------------------------------------------1.00------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTCTATAAAATACCAG.......................................................................................................................................................................191.000.00-----------------------------1.00------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................TACCCGTAATGACTGT.....................................................................................................................................................................................................................................1611.001.00--------------------------------------------------------------1.00---------
........................................................................................................................AGGATTTGCTGTGGTCAGGCTTGCACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................291.000.00------------------------------------------------------1.00-----------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAGAGAGAAGCCATGTGTGTCT......................................................................................2511.001.00------------------------------------1.00-----------------------------------
.........................................................................................................................................................................AGGACTTTGGAGACAGACTGC................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------1.00--------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGCTGAAATCCAGGGGAAG....2311.001.00----------------------------------------------1.00-------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGAGAGAAGCCATGTGAAGA.......................................................................................2611.005.00-----------------------------------1.00------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGAAATCCAGGGG.......1620.500.50---------------------------------------------------------------------0.50--
....................................................................................................................................................................TGGTTAGGACTTTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................1590.220.22-------------------------------0.11---------------------------------------0.11

Antisense strand
AGGCCGTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGGCCTCGGTAAGTGGCCTTGGTACCTCCAGCAGGGCAAATTGGCAGGCCACCCCCACAGTGAAGGCCAAAGGCAGGAAGGATTTGCTGTGGTCAGGCTTGCATCAGATGGGCTTGTGGTGTTGGTTAGGACTTTGGAGACAGACTGCTCTGGTAGTTTTGCCACCTACTGTCTATGGGACTCTGAACATAGTTTCTTCATCACTAAGTCTACCTACCTGTAAACCTACTTCATTAGGTTGCTGTGAAGTTAAATGAGTTAATGAGAAGAATATCAGGCAGATGGTAAGTTCCACGTAAATGATACCCGTAATGACTGTGGGAATCTGAGCAAGGCACTTGTATTCTCTTGATCTCAGTTTCCTTTTCTATAAAATAGGGATAAGAGTCCCTACTTAGCCTCTCAAGGGCTTTTATAATGGAGGAGAATTAAACTCGGGGCAGAGAGAAGCCATGTGTGTCTGTCTGTCACTGACCGTGGCTTTCCCTTTGCCTGCAGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGAAATCCAGGGGAAGCCGG
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................((((((((.(((((((((...(((.((.....)).))))))))))))..))))))))......................................................
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................474...............................................................540................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR189786SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR189783SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR029131(GSM416760)
MCF7. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR189787SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR038858(GSM458541)
MEL202. (cell line)
SRR189785SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR189784SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
TAX577453(Rovira)
total RNA. (breast)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191418(GSM715528)
40genomic small RNA (size selected RNA from t. (breast)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR029130(GSM416759)
DLD2. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR343334SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
.................................................................................................................................................................................................................................................................................................................................AGATGGTAAGTTCCACAG........................................................................................................................................................................................................................................................... 181.000.00--1.00---------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCCTGCAGAACAT............................................. 171.000.00--1.00---------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................CTACTTCATTAGGTTACGG................................................................................................................................................................................................................................................................................................................ 191.000.00-------------------------------------------------------------1.00----------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGATGCTGAAATTG............ 181.000.00--1.00---------------------------------------------------------------------
.........................................................................CAGGGCAAATTGGCAGGCACGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 221.000.00-----------------1.00------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCCTGCAGAACTG............................................. 171.000.00--1.00---------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTATAATGGAGTGTG......................................................................................................................... 191.000.00--1.00---------------------------------------------------------------------
.............................................................................................................................................................................................CTCTGGTAGTTTTGC.................................................................................................................................................................................................................................................................................................................................................................................................. 1580.380.38----------------------------------------------------------------------0.38-
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCCCTACTTAGC..................................................................................................................................................... 1560.170.17------------------------------0.17-----------------------------------------