ID: uc001api.1.2
GENE: ENO1(2)
chr1:8923353-8923602-


(5)
AGO2.ip
(7)
B-CELL
(4)
BRAIN
(11)
BREAST
(34)
CELL-LINE
(5)
CERVIX
(2)
FIBROBLAST
(1)
HEART
(2)
HELA
(4)
LIVER
(3)
OTHER
(19)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
CTAAGAAGGTCCTGGGGGTGGAAGAGTTCAGGGGAGGGTGAGGGTTCTCCTCTGTGCTCTTGACAAAGCCCAGGCATGGAGGGCTTTAGCCATTAACAGCCCCTCCACTGCTTTCCTGCTGGCACCGAGGGGTAATGGCATTGGGGGTTATGGAACCAGAAAATGGGATCATGCCATCTGGGTTGTTCCTTGGCTTCCAGGTGCAAGCTGGCCCAGGCCAATGGTTGGGGCGTCATGGTGTCTCATCGTT
.............................................................................................................................................(((..((((.(((((((((...(((.......))))))))....)))).))))..)))...................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189786SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR189783SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
GSM956925Ago2D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR040025(GSM532910)
G613T. (cervix)
SRR029126(GSM416755)
143B. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR038861(GSM458544)
MM466. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR189787SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR037937(GSM510475)
293cand2. (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037931(GSM510469)
293GFP. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038860(GSM458543)
MM426. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM359189(GSM359189)
HepG2_2pm_3. (cell line)
GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
TAX577746(Rovira)
total RNA. (breast)
SRR189784SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR040028(GSM532913)
G026N. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
GSM956925AGO2Paz8(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR189785GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCCAGT.................................................26123.005.006.00-2.007.00--5.00-----1.00---------------------------------------------------------1.00------1.00---------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCC....................................................23114.0014.002.005.002.00---------1.00------1.00----------------1.00-------------------1.00-----------1.00------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTC.....................................................2218.008.00-5.00----------------------------------------------------------------------------1.00-------1.00----1.00-------
.............................................................................................................................................TGGGGGTTATGGAACCAGAAAATGG....................................................................................2517.007.00-5.00-------------------------------------------------------------------------1.00--------------1.00--------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCCA...................................................2416.006.001.00--------------2.00----------2.00-------------------------1.00----------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCCAT..................................................2516.006.001.00----3.00--------------------------1.00------------------1.00-----------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTT......................................................2115.005.00----------1.00----1.00-------------------------------------------1.00--------------------1.00---1.00--------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCCAG..................................................2515.005.003.00-----------------------------------------------1.00-------------------------------------------1.00------
...........................................................................................................................................ATTGGGGGTTATGGAACCAGAATC.......................................................................................245.000.00-------5.00-------------------------------------------------------------------------------------------
..........................................................................................................................................CATTGGGGGTTATGGAACCAGA..........................................................................................2215.005.00----4.00--------------1.00-------------------------------------------------------------------------------
............................................................................................................................................TTGGGGGTTATGGAACCAGA..........................................................................................2015.005.00--------1.00--------------1.00-----1.00--------1.00--------------------------------------------------1.00---------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTAAG...................................................2414.005.00-4.00-------------------------------------------------------------------------------------------------
.................GTGGAAGAGTTCAGGGGAGGGTG..................................................................................................................................................................................................................2313.003.00---------3.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCCAGC.................................................2613.005.001.00-2.00------------------------------------------------------------------------------------------------
............................................................................................................................................TTGGGGGTTATGGAACCAGAAAATGG....................................................................................2613.003.00-----------3.00---------------------------------------------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGG.........................................................1813.003.00----2.00---1.00------------------------------------------------------------------------------------------
............................................................................................................................................TTGGGGGTTATGGAACCAGAA.........................................................................................2113.003.00----------3.00----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................AATGGTTGGGGCGTCATGGT...........2013.003.00------------------------2.00--------------------------------------------------------1.00-----------------
................................................................................................................................................................................TCTGGGTTGTTCCTTGGCTTCCAGT.................................................252.000.00-------------------------------------------1.00-----1.00-------------------------------------------------
.................................................................................................................................................................................................................GGCCCAGGCCAATGGTTGGGGCGT.................2412.002.00-------------------------------------1.00--------------------------------------------1.00----------------
..............GGGGTGGAAGAGTTCAGGGGAGGG....................................................................................................................................................................................................................2412.002.00--------------2.00------------------------------------------------------------------------------------
.....AAGGTCCTGGGGGTGCGG...................................................................................................................................................................................................................................182.000.00--------1.00----------------------------------------------------------------------------1.00-------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCCATA.................................................2612.006.001.00------------------------1.00-------------------------------------------------------------------------
................................................................................................................................................................................TCTGGGTTGTTCCTTGGCTTCAA...................................................232.000.00---------------------------------1.00---------------------------------1.00-------------------------------
...........................................................................................................................................................................................................................AATGGTTGGGGCGTCATG.............1812.002.00----------------1.00-----------------1.00----------------------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCCATTAT...............................................2812.006.002.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCT....................................................2312.008.00------------------------------------------------------1.00---------1.00----------------------------------
............................................................................................................................................................................................................................ATGGTTGGGGCGTCATGGTGTCTC......2412.002.00------------------------------------------------------------1.00----------------------1.00---------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCT.......................................................2012.002.00---------------------------------------------------------1.00---------------------1.00-------------------
.....AAGGTCCTGGGGGTGAGG...................................................................................................................................................................................................................................182.000.00--------2.00------------------------------------------------------------------------------------------
..........................................................................................................................................CATTGGGGGTTATGGAACCAG...........................................................................................2112.002.00----------------------2.00----------------------------------------------------------------------------
..........................................................................................................................................................................................................................CAATGGTTGGGGCGTCATG.............1912.002.00-------------1.00--------------1.00----------------------------------------------------------------------
.............................................................................................................................................................................................................................TGGTTGGGGCGTCATGGTG..........1912.002.00-------------1.00----1.00--------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CAGGCCAATGGTTGGGGCGTCATGGTGTCTCATC...3412.002.00-----2.00---------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................GCTGGCCCAGGCCAATGGTTGG......................2221.501.50---------1.50-----------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GGCCCAGGCCAATGGTTGGGGCG..................2311.001.00---------------------------1.00-----------------------------------------------------------------------
...........................................................................................................................................................................................................................AATGGTTGGGGCGTCATGGTG..........2111.001.00---------------------------------------------------------------------1.00-----------------------------
.......................................................................................................................................................................................................................GGCCAATGGTTGGGGCGTAGGC.............221.000.00--------------------------------------------------------------------------1.00------------------------
...........................................................................................................................................................................................................................AATGGTTGGGGCGTCATGGTGTCT.......2411.001.00------------------1.00--------------------------------------------------------------------------------
...............................................................................................ACAGCCCCTCCACTGCTTTC.......................................................................................................................................2011.001.00--------------------------------------------------1.00------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTAAA....................................................2311.002.00-------------------------------------------------------1.00-------------------------------------------
..............................................................................................................................................................................................................GCTGGCCCAGGCCAATGGTTGGGGCGTCATGGTG..........3411.001.00-----------------1.00---------------------------------------------------------------------------------
.........................................................................................................................................GCATTGGGGGTTATGGGG...............................................................................................181.000.00-------------------------------1.00-------------------------------------------------------------------
....................................................................................................................................................................................................................................GGCGTCATGGTGTCTCAA....181.000.00--------------------------------------------1.00------------------------------------------------------
.........................................................................................................................................GCATTGGGGGTTATGGGGTA.............................................................................................201.000.00----------------1.00----------------------------------------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCCAAC.................................................2611.006.00--1.00------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................AGGCCAATGGTTGGGGCG..................1811.001.00-------------1.00-------------------------------------------------------------------------------------
........................................................................................................................................................................................................GTGCAAGCTGGCCCAGGCCAATGGT.........................2521.001.00-----------------------------------------------------1.00---------------------------------------------
....................................................................................................CCCTCCACTGCTTTCCAGC...................................................................................................................................191.000.00----------------------------------------1.00----------------------------------------------------------
................................................................................................................................................................................TCTGGGTTGTTCCTTGGCTTT.....................................................211.000.00-----------------------------------------------------------------------1.00---------------------------
.............................................................................................................................................................................................................................TGGTTGGGGCGTCATG.............1611.001.00------------------------------------------------------------------------1.00--------------------------
....................................................................................................................................................................................................................CCAGGCCAATGGTTGGG.....................1711.001.00---------------------------------------1.00-----------------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCCAA..................................................2511.006.001.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCCAAT.................................................2611.006.001.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCCATT.................................................2611.006.00------------1.00--------------------------------------------------------------------------------------
.........................................................................................................................................GCATTGGGGGTTATGTGG...............................................................................................181.000.00---------------------------------------------1.00-----------------------------------------------------
.............................................................................................................................................TGGGGGTTATGGAACCAGA..........................................................................................1911.001.00-----------------------------------------------1.00---------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTGA.....................................................2211.002.00-----------------------------------1.00---------------------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTATC....................................................2311.002.00------------------------------------------1.00--------------------------------------------------------
.................................................................................................................................................................................................................GGCCCAGGCCAATGGTTGGGGCTA.................241.000.00---------------------------1.00-----------------------------------------------------------------------
.............................................................................................................................................................................................................AGCTGGCCCAGGCCAATGGTTGGGT....................251.000.00-----------------1.00---------------------------------------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCCCGT.................................................2611.0014.00-----------------------------------------1.00---------------------------------------------------------
......................................................................................................................................................................................................................AGGCCAATGGTTGGGGCGTC................2011.001.00----------------------------------1.00----------------------------------------------------------------
...AGAAGGTCCTGGGGGGGA.....................................................................................................................................................................................................................................181.000.00-------------------------------------------------------------------------1.00-------------------------
................................................................................................................TTCCTGCTGGCACCGAGGACTG....................................................................................................................221.000.00------------------------------1.00--------------------------------------------------------------------
..............................................................................................................................................................................................................................GGTTGGGGCGTCATGGTG..........1811.001.00----------------------------------------------------------------------------1.00----------------------
.........................................................................GCATGGAGGGCTTTAGCCATA............................................................................................................................................................211.000.00-------------------1.00-------------------------------------------------------------------------------
...................................................................................CTTTAGCCATTAACAGC......................................................................................................................................................1711.001.00-------------------------------------------------------------1.00-------------------------------------
................................................................................................................................................................................TCTGGGTTGTTCCTTGGCTTCCAA..................................................2411.001.00--------------------------------1.00------------------------------------------------------------------
......................................................................................................................................................................................................AGGTGCAAGCTGGCCCAGGCCAAT............................2411.001.00---------------------------------1.00-----------------------------------------------------------------
...........................................................................................................................................................................................................................AATGGTTGGGGCGTCATGGTGT.........2211.001.00--------------------1.00------------------------------------------------------------------------------
.........................................................................................................................................GCATTGGGGGTTATGTCTA..............................................................................................191.000.00-------------------------------1.00-------------------------------------------------------------------
............................................................................................................................................TTGGGGGTTATGGAACCATA..........................................................................................201.000.00-----------------------1.00---------------------------------------------------------------------------
............................................................................................................................................TTGGGGGTTATGGAACCAGAAAATG.....................................................................................2511.001.00-----------------------------1.00---------------------------------------------------------------------
.........................................................................................................................................................................................................................CCAATGGTTGGGGCGTCATGGTGTCT.......2611.001.00----------------------------1.00----------------------------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCCACT.................................................2611.006.00--1.00------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................CCAATGGTTGGGGCGTCT...............181.000.00---------------------1.00-----------------------------------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTAC....................................................2311.005.00--------------1.00------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................TGGTTGGGGCGTCATGGTGT.........2011.001.00----------------------------------------------------------------------------------------1.00----------
.........................................................................................................................................GCATTGGGGGTTATGGTTG..............................................................................................191.000.00----------------1.00----------------------------------------------------------------------------------
................................................................................................................................................................................TCTGGGTTGTTCCTTGGCTTCCA...................................................2311.001.00---------------------------------------------------------------------------------------1.00-----------
.................................................................................................................................................................................................................GGCCCAGGCCAATGGTTGG......................1921.001.00-----------------------------------0.50------------------------------------------------------------0.50--
........................................................................................................................................................................................................................................TCATGGTGTCTCATCGTT1811.001.00--------------------1.00------------------------------------------------------------------------------
.....................................................................................................................................AATGGCATTGGGGGTCGAG..................................................................................................191.000.00---------------------------------------------------------------------------------------------1.00-----
.............................................................................................TAACAGCCCCTCCACTT............................................................................................................................................171.000.00------------------------------1.00--------------------------------------------------------------------
......................................................................................................................................................................................................................AGGCCAATGGTTGGGGCGTCATGGTG..........2611.001.00------------------1.00--------------------------------------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCGAGT.................................................2611.008.001.00--------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................TGGTTGGGGCGTCATGGT...........1811.001.00---------------------1.00-----------------------------------------------------------------------------
............................................................................................................................................TTGGGGGTTATGGAACCAGAAAATGGGATT................................................................................301.000.00-------------------------1.00-------------------------------------------------------------------------
...............................................................................................................................................................................ATCTGGGTTGTTCCTTGGCTTCCT...................................................2411.0014.00----------------------------------------------------------1.00----------------------------------------
........................................................................................................................................................................................................GTGCAAGCTGGCCCAGGC................................1820.500.50----------------------------------------------------------------------------------------------0.50----
.............................................................................................................................................................................................................AGCTGGCCCAGGCCAATGG..........................1920.500.50-----------------------------------------------------------------------------------------------0.50---
..........................................................................................................................................................................................................GCAAGCTGGCCCAGGCC...............................1720.500.50------------------------------------0.50--------------------------------------------------------------
................................................................................................................................................................................TCTGGGTTGTTCCTTG..........................................................1630.330.33-------------------------------------------------------------------------------------------------0.33-
.............................................................................................................................................................................................................................TGGTTGGGGCGTC................1380.120.12-------------------------------------0.12-------------------------------------------------------------

Antisense strand
CTAAGAAGGTCCTGGGGGTGGAAGAGTTCAGGGGAGGGTGAGGGTTCTCCTCTGTGCTCTTGACAAAGCCCAGGCATGGAGGGCTTTAGCCATTAACAGCCCCTCCACTGCTTTCCTGCTGGCACCGAGGGGTAATGGCATTGGGGGTTATGGAACCAGAAAATGGGATCATGCCATCTGGGTTGTTCCTTGGCTTCCAGGTGCAAGCTGGCCCAGGCCAATGGTTGGGGCGTCATGGTGTCTCATCGTT
.............................................................................................................................................(((..((((.(((((((((...(((.......))))))))....)))).))))..)))...................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189786SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR189783SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
GSM956925Ago2D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR040025(GSM532910)
G613T. (cervix)
SRR029126(GSM416755)
143B. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR038861(GSM458544)
MM466. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR189787SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR037937(GSM510475)
293cand2. (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037931(GSM510469)
293GFP. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038860(GSM458543)
MM426. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM359189(GSM359189)
HepG2_2pm_3. (cell line)
GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
TAX577746(Rovira)
total RNA. (breast)
SRR189784SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR040028(GSM532913)
G026N. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
GSM956925AGO2Paz8(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR189785GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
............................................................................................TTAACAGCCCCTCCAAC............................................................................................................................................. 171.000.00-----------------1.00---------------------------------------------------------------------------------
.........................................................................................................................GCACCGAGGGGTAATGGCATTGG.......................................................................................................... 2311.001.00----------------------------------------------1.00----------------------------------------------------
...................................................................................................................................GTAATGGCATTGGGGGT...................................................................................................... 1711.001.00------------------------------------------------------------------1.00--------------------------------
..............................................................................................................CTTTCCTGCTGGCACCAA.......................................................................................................................... 181.000.001.00--------------------------------------------------------------------------------------------------
.....................................................................................................................................AATGGCATTGGGGGTTGG................................................................................................... 181.000.00--------------------------------------------------------------1.00------------------------------------
......................AGAGTTCAGGGGAGGGTGG................................................................................................................................................................................................................. 191.000.00---------------------------------------------------------------1.00-----------------------------------
....GAAGGTCCTGGGGGTGGAAT.................................................................................................................................................................................................................................. 201.000.00-----------------------------------------------------------------1.00---------------------------------
..........................................GGTTCTCCTCTGTGCTC............................................................................................................................................................................................... 1740.250.25--------------------------------------------------------------------------------------------------0.25