ID: hsa-mir-6873
GENE: WDR46(1)
chr6:33254954-33255181-


(3)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(4)
AGO2.ip
(1)
AGO3.ip
(6)
B-CELL
(4)
BRAIN
(17)
BREAST
(34)
CELL-LINE
(3)
CERVIX
(2)
FIBROBLAST
(8)
HEART
(6)
HELA
(6)
LIVER
(4)
OTHER
(2)
RRP40.ip
(41)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
GAGTAACACGGCTTGAGTTCCTGCCCTTCCACTTCCTCCTGGCTACAGCTGTGAGTGGCCATGGAGCTCAGGAACTGGTTGGAAGCCCTTGGGATGACCACCTCTCCTTTAGGACCCCAGCAGAGGGAATACAGAGGGCAATCAGGACTGGGTCATTCTCTCTGTCTTTCTCTCTCAGTCAGAAACAGGGTTTCTAACCTACCTGGATGTGTCAGTGGGGAAGATTGT
.........................................................................................................................((((((((.((((((((.(((...(((...))))))))))))))..)))))))).....................................................
...................................................................................................................116...........................................................178................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR189787SRR189784SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038862(GSM458545)
MM472. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189785SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191455(GSM715565)
181genomic small RNA (size selected RNA from . (breast)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR029126(GSM416755)
143B. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189783SRR040025(GSM532910)
G613T. (cervix)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR343334SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR191509(GSM715619)
156genomic small RNA (size selected RNA from . (breast)
SRR343335SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
TAX577740(Rovira)
total RNA. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040022(GSM532907)
G575N. (cervix)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR191505(GSM715615)
139genomic small RNA (size selected RNA from . (breast)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
........................................................................................................................CAGAGGGAATACAGAGGGCAAT......................................................................................22135.0035.00-18.00----2.003.00-1.00-1.00-------2.001.001.00-----------1.00--1.00-----1.00----------1.00-1.00----------------1.00------------------------------------------------------------------
............................................................................................................................................................TCTCTCTGTCTTTCTCTCTCAGA.................................................23333.0021.002.003.003.00-5.00--1.001.002.001.00----1.00--------------2.00-------------1.00--1.00-1.00----1.00--1.000.67-1.00-------------------1.001.001.00--1.00---1.00------------0.33------------------------------------
............................................................................................................................................................TCTCTCTGTCTTTCTCTCTCAG..................................................22321.0021.008.33-1.33-1.001.00--1.33-1.67----0.33----0.33-------------------------0.67---0.330.330.33---0.33--------------------------------------0.33--------0.330.67--------0.33---0.330.33----0.33---0.330.33-----0.33---
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTCAG..................................................23220.5020.508.001.503.00-----0.500.50-0.50-----2.500.50-------------------------------------------------------------------------------1.00-------0.50-0.50-0.500.500.50--------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTCAGA.................................................24215.0020.502.00-------1.00--1.004.00--0.50----------------2.00--1.00----------------------0.501.00-----------1.00----------------------1.00--------------------------------------------
............................................................................................................................................................TCTCTCTGTCTTTCTCTCTCAGT.................................................23313.6713.672.002.67--0.33----0.33---0.67----1.000.33---------------------------0.67-------0.33------0.67--------------------------------0.33-------0.330.33--------0.33-0.330.33---0.330.33-0.33-0.330.330.33--0.330.33-------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTCAGT.................................................24210.5010.505.002.50------------------0.50------------------------0.50---0.50----------------------------------------------------0.500.50-----0.50-----------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCAA.......................................................................................2119.009.00---1.00-------1.00-------------1.00-----1.00------1.002.00--1.001.00-----------------------------------------------------------------------------------------------
.........................................................................................................................AGAGGGAATACAGAGGGCA........................................................................................1919.009.00---7.00------------------------1.00-----------------------------------------------------------1.00--------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCAATA.....................................................................................2317.0035.00-----3.00---------------------1.00------------1.002.00-------------------------------------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTCA...................................................2235.335.330.671.67-----0.33---------------------------------------------0.33--------0.33--------------------------------0.33---------------------0.33----0.33---------0.330.330.33----
........................................................................................................................CAGAGGGAATACAGAGGGCA........................................................................................2015.005.00--1.00--------------------------2.00----1.00-------------1.00------------------------------------------------------------------------------------------
..........................................................................................................................GAGGGAATACAGAGGGCAA.......................................................................................1915.005.00-5.00-----------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCAAAA.....................................................................................2314.009.00------1.00-----------1.00------------------2.00-----------------------------------------------------------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCAT.......................................................................................2114.005.00--------------2.00--------2.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCAAA......................................................................................2214.009.00-----------1.00-------------1.00--------------------------------------1.00----------------------1.00---------------------------------------------------
.............................................................................................................................................................CTCTCTGTCTTTCTCTCTCAGA.................................................223.000.00-------------1.00-----------------------------------------------1.00------------------------------1.00----------------------------------------------
............................................................................................................................................................TCTCTCTGTCTTTCTCTCTCAGTA................................................2433.0013.67----1.00-----------------------------------------------1.00-------------1.00------------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTCAA..................................................2333.005.332.00--------------------------------1.00---------------------------------------------------------------------------------------------------------
............................................................................................................................................................TCTCTCTGTCTTTCTCTCTCA...................................................2162.672.671.17------------0.17-0.17---0.17-0.17-----------------------------------0.17------------------------------------------------0.17------0.17----------------------0.17-0.17
........................................................................................................................CAGAGGGAATACAGAGGGCAATCT....................................................................................2412.002.002.00------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................AGAGGGAATACAGAGGGCAT.......................................................................................2012.009.00----------------------------------------------------------------------------1.00-------------------1.00------------------------------------------
......................................................................................................................AGCAGAGGGAATACAGAGGGC.........................................................................................2112.002.00-------------------------------------------------------------------1.00-----------------------------1.00-----------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCAATAA....................................................................................2412.0035.00---------------1.00-----------1.00---------------------------------------------------------------------------------------------------------------
.....................................................................................................................CAGCAGAGGGAATACAGAGG...........................................................................................2012.002.00------------------------1.00---1.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCATAA.....................................................................................2312.005.00------2.00------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................AGCAGAGGGAATACAGAGGGCA........................................................................................2212.002.00-------------------------------------------1.00-----------------------------------------------1.00-----------------------------------------------
............................................................................................................................................................TCTCTCTGTCTTTCTCTCTCAGAA................................................2432.0021.00--------------------------------------------------1.00----------------------1.00-----------------------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCAATC.....................................................................................2312.002.00-----2.00-------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTCAGC.................................................2422.0020.50--------1.00-------1.00--------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCAG....................................................211.000.00---------------------------------------------------1.00---------------------------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCCCAG..................................................231.000.00----------------1.00--------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CTGGATGTGTCAGTGGGGAAGATT..2411.001.00--------------------------1.00----------------------------------------------------------------------------------------------------------------
.......................................................................................................................GCAGAGGGAATACAGAGGGTT........................................................................................211.000.00------------------------------------1.00------------------------------------------------------------------------------------------------------
............................................................ATGGAGCTCAGGAACTGG......................................................................................................................................................1811.001.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................CAGCAGAGGGAATACAGAGGGC.........................................................................................2211.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTAA...................................................2201.001.00-----------------------------------------------------------------1.00-------------------------------------------------------------------------
.....................................................................................................................CAGCAGAGGGAATACAGAGGGCA........................................................................................2311.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTAAAA.................................................2401.001.00---------------------------------------------1.00---------------------------------------------------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCAATT.....................................................................................2311.0035.00------------------------------------------------------------------------------1.00------------------------------------------------------------
.....................................................................................................................CAGCAGAGGGAATACAGAGGGCAA.......................................................................................2411.001.00--------------------------------------------1.00----------------------------------------------------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCAAAG.....................................................................................2311.009.00--------------------------------------------------------1.00----------------------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTCAGAT................................................2521.0020.50---------------------1.00---------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCT.....................................................2001.001.00----------------------------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................CCAGCAGAGGGAATACAGAGGGCAATCA....................................................................................2811.001.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................AGAGGGAATACAGAGGGCAA.......................................................................................2011.001.00----------------1.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................TGGAAGCCCTTGGGATGG...................................................................................................................................181.000.00--------------------------------------------------------------------------------------1.00----------------------------------------------------
..........................................................CCATGGAGCTCAGGAACTCTG.....................................................................................................................................................211.000.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCAAATT....................................................................................2411.009.00---------1.00---------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCAAAGT....................................................................................2411.009.00----------------------------------1.00--------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCT.......................................................1801.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCC........................................................................................2011.001.00--------------------------------------------------------------------1.00----------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTCAAG.................................................2431.005.331.00------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................TCTCTCTGTCTTTCTCTCTCAGTAA...............................................2531.0013.67-----------------------------------1.00-------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................GGATGTGTCAGTGGGGAAGATT..2211.001.00----------------------------------------------------------------------1.00--------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTCAGAA................................................2521.0020.50---------------------------------------------------------------------------1.00---------------------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGG...........................................................................................1711.001.00-----------------------------------------------------------------------------1.00-------------------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCATTA.....................................................................................2311.005.00----------------------------------------1.00--------------------------------------------------------------------------------------------------
.............................................................................................................................................TCAGGACTGGGTCATTCTCTCTG................................................................2311.001.00------------------------------------------------------------------------------------------1.00------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTTGT..................................................2301.001.00-------------------------------------------------------------------------------1.00-----------------------------------------------------------
...........................................................................................................................................................................................................TGGATGTGTCAGTGGGGATTT....211.000.00------1.00------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................GCAGAGGGAATACAGAGGGCAT.......................................................................................2211.001.00--------------------------------------------------------------------------1.00----------------------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGCGA.......................................................................................2111.001.00---------------------------------------------------------------------------------------------1.00---------------------------------------------
.......................................................................................................................GCAGAGGGAATACAGAGGGCA........................................................................................2111.001.00------------------------------------------------------------------------------------1.00------------------------------------------------------
......................................................................................................................AGCAGAGGGAATACAGAGG...........................................................................................1911.001.00-----------------------------------------------------------------------------------1.00-------------------------------------------------------
............................................................................................................................................................TCTCTCTGTCTTTCTCTCTCAGAAG...............................................2531.0021.00--1.00----------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................AGCAGAGGGAATACAGAGGGCAA.......................................................................................2311.001.00---------------------------------------------------------------------1.00---------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTCAAAT................................................2531.005.331.00------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................AGAGGGAATACAGAGGGCATT......................................................................................2111.009.00--------------------------1.00----------------------------------------------------------------------------------------------------------------
.....................................................................................................................CAGCAGAGGGAATACAGAGGATT........................................................................................2311.002.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------
........................................................................................................................CAGAGGGAATACAGAGGGC.........................................................................................1911.001.00--------------------------------------1.00----------------------------------------------------------------------------------------------------
.AGTAACACGGCTTGAGTTC................................................................................................................................................................................................................1911.001.00------------------------1.00------------------------------------------------------------------------------------------------------------------
...........................TCCACTTCCTCCTGGTTGG......................................................................................................................................................................................191.000.00----------1.00--------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTCAAT.................................................2431.005.33---------------------------------------------------------------1.00---------------------------------------------------------------------------
.............................................................................................................................................................CTCTCTGTCTTTCTCTCTCAGT.................................................2230.670.67---------------------------------------------0.33--------0.33------------------------------------------------------------------------------------
............................................................................................................................................................TCTCTCTGTCTTTCTCTCTCAT..................................................2260.332.670.17-0.17----------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TTCTCTCTGTCTTTCTCTCTCAAC.................................................2430.335.33--------------------0.33----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................CTCTGTCTTTCTCTCTCAGT.................................................2050.200.20---0.20---------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................TCTCTCTGTCTTTCTCTCTCATT.................................................2360.172.67-----------------------------------------------------------------------------------------------------------------------------------------0.17-
............................................................................................................................................................TCTCTCTGTCTTTCTCTCTCAAA.................................................2360.172.67--------------------0.17----------------------------------------------------------------------------------------------------------------------

Antisense strand
GAGTAACACGGCTTGAGTTCCTGCCCTTCCACTTCCTCCTGGCTACAGCTGTGAGTGGCCATGGAGCTCAGGAACTGGTTGGAAGCCCTTGGGATGACCACCTCTCCTTTAGGACCCCAGCAGAGGGAATACAGAGGGCAATCAGGACTGGGTCATTCTCTCTGTCTTTCTCTCTCAGTCAGAAACAGGGTTTCTAACCTACCTGGATGTGTCAGTGGGGAAGATTGT
.........................................................................................................................((((((((.((((((((.(((...(((...))))))))))))))..)))))))).....................................................
...................................................................................................................116...........................................................178................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR189787SRR189784SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038862(GSM458545)
MM472. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189785SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191455(GSM715565)
181genomic small RNA (size selected RNA from . (breast)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR029126(GSM416755)
143B. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189783SRR040025(GSM532910)
G613T. (cervix)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR343334SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR191509(GSM715619)
156genomic small RNA (size selected RNA from . (breast)
SRR343335SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
TAX577740(Rovira)
total RNA. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040022(GSM532907)
G575N. (cervix)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR191505(GSM715615)
139genomic small RNA (size selected RNA from . (breast)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
......................GCCCTTCCACTTCCTCCCC........................................................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------------------1.00-------------------------------------
.......................CCCTTCCACTTCCTCCTGGCTACAGCTG................................................................................................................................................................................. 2811.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------------
......................GCCCTTCCACTTCCTCCT............................................................................................................................................................................................ 1821.001.00------------------------------------------------0.50----------------------------------------------------------0.50-------------------------------
............................CCACTTCCTCCTGGCTACAGCT.................................................................................................................................................................................. 2211.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------------
.........................CTTCCACTTCCTCCTTGT......................................................................................................................................................................................... 181.000.00---------------------------------------------------------------------------------------------------1.00---------------------------------------
..................................................................................................................................................................TGTCTTTCTCTCTCAGTCAGAAACAG........................................ 2611.001.00----------------------------------------------------------------------------------------------------1.00--------------------------------------