ID: hsa-mir-6867
GENE: RAPGEFL1(13)
chr17:38349620-38349965+


(1)
AGO1.ip OTHER.mut
(3)
AGO2.ip
(7)
B-CELL
(15)
BRAIN
(10)
BREAST
(25)
CELL-LINE
(2)
CERVIX
(2)
HEART
(2)
HELA
(7)
LIVER
(3)
OTHER
(1)
RRP40.ip
(43)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
AGTGGCCGAAAAAGTGAGGACAATCCGCAAATACCGGAGCCGGCCCCTTTGTGAGTACCCAGGGTACTGAGAGCAGTACAGATAGAGCTTTGACTGAACGGGAGGGTTCAGGGGAGAACTCCCTGTCCAGATGTGTATTTCCATACACTTGCTGGTTCCCCATTCTCTCCTTGCCTCTGCAGAGGCCTTCCTGCCCAACATCTGTCTCAGTCCACAGCCTGATCTTCTGCCCGGTGTGTGTGTAGAGGAAGAAGGGAAGCTGGGAACCTGACTGCCTCTCCCTCTTTACCCACTAGGCCTGGACATGGAGGCATCCCCCAATCACCTGCAGACCAAGGCCTATGTG
........................................................................................................................................................................................................................................((((.(((...(((((.((.(((..((..((....))..)).))))).))))).))).))))....................................................
.....................................................................................................................................................................................................................................230...............................................................296................................................
SizePerfect hitTotal NormPerfect NormGSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR343335SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR038860(GSM458543)
MM426. (cell line)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR189783SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR037935(GSM510473)
293cand3. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553576(SRX182782)
source: Testis. (testes)
SRR040031(GSM532916)
G013T. (cervix)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR343334SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
TAX577579(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR038857(GSM458540)
D20. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGGA.........................................................................................23187.0087.007.009.005.003.005.001.002.002.002.005.002.001.00-2.001.00-2.00-2.00---2.00--1.002.001.002.001.001.001.00--1.002.002.00----1.002.00-----1.001.001.00--1.00-2.001.00-------1.00-1.001.00-1.00---1.00---1.00--------------1.00-------------1.00------1.001.00------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGG...........................................................................................21127.0027.00-1.00---1.001.00---1.001.00-----3.00---------1.00------1.00--1.00-----1.00---1.00------1.00-1.00----2.00---------1.00----------------1.00-1.00-----1.00---1.00----1.00-1.001.00---1.00----1.00---
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGG..........................................................................................22124.0024.002.002.00--2.001.001.00-2.00-1.00-1.002.00---1.00-----1.00--------1.00-----1.00-1.00---1.00-1.00--1.00--1.00-1.00------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAG............................................................................................20121.0021.00-1.003.00-----1.00-1.00---1.001.001.00--3.00-1.001.00--------1.001.00-1.00------------1.00----1.00----1.00----------------------------------------1.00----------------------
...........................................................................................................................................................................................................................................GTGTGTGTAGAGGAAGAAGGGA.........................................................................................22112.0012.001.00--2.00----1.001.00--2.00-1.00--1.00-----------------------------------1.00------------------1.00---------------------------------------------1.00--
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGGAT........................................................................................24111.0087.002.00------1.00--1.00---------1.00---1.00-----2.00----1.00-1.00---------------------------------------------------------------------------------1.00-
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGGT.........................................................................................2319.0024.00----1.00----1.00--1.00--------------1.001.00-------1.00----1.00-------------------------------------------------------------1.00-------1.00---------
.........................................................................................................................................................................................................................................GTGTGTGTGTAGAGGAAGAAGGGA.........................................................................................2419.009.002.001.00----2.00-----1.00------------2.00--1.00--------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGA...........................................................................................2117.0021.00-----------------------2.001.00----1.00---3.00---------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................TCTCCCTCTTTACCCACTAGT.................................................216.000.00---------------1.00---1.00-1.00----------------1.00---------------------1.00--------------------1.00---------------------------------------
............................................................................................................................................................................................................................................TGTGTGTAGAGGAAGAAGGGA.........................................................................................2116.006.00--5.00-----------1.00----------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGA..........................................................................................2216.0027.00-----1.00-1.00-------1.00----1.00-------------------1.00-------------------------------------------1.00------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGGAAT.......................................................................................2515.005.00-1.00-1.00-1.00-------------------------------------------------------------------------------------------------------1.001.00----------
...................................................................................................................................................................................................................................................................................CTCTCCCTCTTTACCCACTAGT.................................................225.000.00------------------------------------------------------------1.00---------1.00----------------------1.001.00------1.00-------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGGAA........................................................................................2415.005.001.00--1.00-1.00-------------------------1.00--------------------------1.00--------------------------------------------------------------
...........................................................................................................................................................................................................................................GTGTGTGTAGAGGAAGAAGGGAAA.......................................................................................2414.001.001.00--------------------------------------------2.00--------------------------------------------------------1.00------------------
.........................................................................................................................................................................................................................................GTGTGTGTGTAGAGGAAGAAGG...........................................................................................2214.004.00---1.00----1.00----------------1.00------------------------1.00----------------------------------------------------------------------
...........................................................................................................................................................................................................................................GTGTGTGTAGAGGAAGAAGG...........................................................................................2014.004.00---1.001.00------------------------1.00------------------------------------------------1.00------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGGAAA.......................................................................................2513.005.00---------------------1.00----------------------------------------------------------1.00----------------------------------1.00-----
.........................................................................................................GTTCAGGGGAGAACTCTG...............................................................................................................................................................................................................................183.000.00-------------------1.00------------------------------------------------------1.001.00---------------------------------------------
....................................................................................................................................................................................................................................................GAGGAAGAAGGGAAGTATT...................................................................................192.000.00---------------------------------------------------------------------------------------1.00-------1.00-------------------------
............................................................................................................................................................................................................................................TGTGTGTAGAGGAAGAAGGG..........................................................................................2012.002.00-1.00----1.00------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGAAA........................................................................................2412.0027.00--------1.00-------------1.00--------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................GTGTGTGTAGAGGAAGAAG............................................................................................1912.002.00---------------------------------------------------------1.00----------------------------1.00----------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGT..........................................................................................2212.0027.00-------------------------------------------1.00--------------1.00--------------------------------------------------------------
.........................................................................................................................................................................................................................................GTGTGTGTGTAGAGGAAGAAGGGT.........................................................................................2412.002.00----1.00---------------------------------1.00----------------------------------------------------------------------------------
............................................................................................................................................................................................................................................TGTGTGTAGAGGAAGAAGGGAAT.......................................................................................2312.002.00-----------2.00-------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................GTGTGTGTAGAGGAAGAAGGG..........................................................................................2112.002.00---1.00----------1.00----------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................GTGTGTGTGTAGAGGAAGAAGGG..........................................................................................2312.002.00----------------1.00--------------------------------------------------------------------------------1.00-----------------------
............................................................................................................................................................................................................................................TGTGTGTAGAGGAAGAAGGGAA........................................................................................2212.002.00---1.00---1.00-----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................GGTGTGTGTGTAGAGGAAGAAGA...........................................................................................231.000.00-----------1.00-------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................GTGTGTGTAGAGGAAGAAGGGAAT.......................................................................................2411.001.00----1.00--------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TACACTTGCTGGTTCTCT.........................................................................................................................................................................................181.000.00-----------------------------------------------------------1.00-------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGT...........................................................................................2111.0021.00---------------1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGGG.........................................................................................2311.0024.00-------------1.00-----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................GAAGCTGGGAACCTGACTGC.......................................................................2011.001.00------1.00------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................GGTGTGTGTGTAGAGGAAGAAGGGA.........................................................................................2511.001.00-----------------------------------------------------------------------------------1.00-------------------------------------
...........................................................................................................................................................................................................................................GTGTGTGTAGAGGAAGAAGGGAA........................................................................................2311.001.00-------1.00-----------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGGGT........................................................................................2411.0024.00----------1.00--------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................TGTAGAGGAAGAAGGGAAGCTGGGAACCTGACA.........................................................................331.000.00------------------------1.00------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAAAGT............................................................................................201.000.00-----------------------1.00-------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................GAGGAAGAAGGGAAGCTGG...................................................................................1911.001.00----------------------------------------------------------------------------------1.00--------------------------------------
.........................................................................................................................................................................................................................................................................................................CCTGGACATGGAGGCATCC..............................1911.001.00----------------1.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................CTCTCCCTCTTTACCCACTAGA.................................................221.000.00------------------1.00------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................TGGACATGGAGGCATCCC.............................1811.001.00--------------------------------------------------------------------------------------------------------------------1.00----
.........................................................................................................................................................................................................................................GTGTGTGTGTAGAGGAAGAAGGGAT........................................................................................2511.009.00------------------------------------------------------------------1.00------------------------------------------------------
.........................................................................................................................................................................................................................................GTGTGTGTGTAGAGGAAGAAG............................................................................................2111.001.00-----1.00-------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGGTTTT......................................................................................2611.0024.00-----1.00-------------------------------------------------------------------------------------------------------------------
..................................................................CTGAGAGCAGTACAGATAGAGCTTTG..............................................................................................................................................................................................................................................................2611.001.00---------------------1.00---------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................GTGTGTGTGTAGAGGAAGAAGGT..........................................................................................2311.004.001.00------------------------------------------------------------------------------------------------------------------------
...........................................................................GTACAGATAGAGCTTTGACTGAACGGGAGGGTTC.............................................................................................................................................................................................................................................3411.001.00--------------------------------1.00----------------------------------------------------------------------------------------
.................................................................................ATAGAGCTTTGACTGAACGGGAGGGTT..............................................................................................................................................................................................................................................2711.001.00--------------------1.00----------------------------------------------------------------------------------------------------
......................................................................GAGCAGTACAGATAGAGCTTTGACTGAACG......................................................................................................................................................................................................................................................3011.001.00------------------1.00------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................TCCCCCAATCACCTGCAGACCAAGGC.......2611.001.00----------------------------------------------------------------1.00--------------------------------------------------------
...........................................................................................................................................................................................................................................GTGTGTGTAGAGGAAGAAGGTA.........................................................................................2211.004.00------------1.00------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGTTT........................................................................................2411.0027.00--------------------1.00----------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................TGTGTGTAGAGGAAGAAGGGAT........................................................................................2211.006.00-1.00-----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................CTTTACCCACTAGGCCTGGACATGGAGGCATC...............................3211.001.00------------------1.00------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................GTGTGTGTAGAGGAAGAAGGGAT........................................................................................2311.0012.001.00------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGAA.........................................................................................2311.0027.00---------------1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGGTAA.......................................................................................2511.0024.00----------------------------------------------1.00--------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................CCTGGACATGGAGGCAACAC.............................201.000.00-------------------------------------------------------------------------------1.00-----------------------------------------
..........................................................................................................................................................................................................................................................GAAGGGAAGCTGGGAACCTGACTGCCTCTCC.................................................................3111.001.00-----------1.00-------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGT..............................................................................................181.000.00-------1.00-----------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGGATA.......................................................................................2511.0087.00---------------------------------------------------1.00---------------------------------------------------------------------
.........................................................................................................................................................................................................................................GTGTGTGTGTAGAGGAAGAAGGGTT........................................................................................2511.002.00-----1.00-------------------------------------------------------------------------------------------------------------------
................................................................................................................GGAGAACTCCCTGTCC..........................................................................................................................................................................................................................1611.001.00---------------------------1.00---------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGGCTT.......................................................................................2511.0024.00---------------------------------------------------------------------------------------------------1.00---------------------
....................................................................................................................................................................................................................................................GAGGAAGAAGGGAAGCTGCTGG................................................................................221.000.00----------------------------------------------------------------------------1.00--------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAA.............................................................................................1911.001.00-----------------------------------------------------------------------------------------1.00-------------------------------
................................ACCGGAGCCGGCCCCTTGGTT.....................................................................................................................................................................................................................................................................................................211.000.00--------------------------------------------------------------1.00----------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGGAAAT......................................................................................2611.005.00--------------------------1.00----------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................TGTGTGTAGAGGAAGAAGG...........................................................................................1911.001.00--------------------------------------------------------------------1.00----------------------------------------------------
.............................AATACCGGAGCCGGCCCCTTTGCC.....................................................................................................................................................................................................................................................................................................241.000.00-----------------------------------------------------------1.00-------------------------------------------------------------
....................................................................................................................................................................................................................................................GAGGAAGAAGGGAAGCTGGGAACCTGACT.........................................................................2911.001.00-------------------------------------------------------------------------------------1.00-----------------------------------
................................................................................................................................................................CATTCTCTCCTTGCCTCTGCAGA...................................................................................................................................................................2311.001.00------------------------1.00------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGAAGGAT.........................................................................................2311.0027.00--------------------1.00----------------------------------------------------------------------------------------------------
......................................................................................GCTTTGACTGAACGGGAGGGTTC.............................................................................................................................................................................................................................................2311.001.00--------------------------1.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................CCTCTCCCTCTTTACCCACTAG..................................................2211.001.00------------------------------------------------1.00------------------------------------------------------------------------
.........................................................................................................................................................................................................CTGTCTCAGTCCACAGC................................................................................................................................1720.500.50-------------------------------------------------------------------0.50-----------------------------------------------------
..........................................................................................................................................................................................................................................TGTGTGTGTAGAGGAAGA..............................................................................................1830.330.33----------------------0.33--------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................AGGGAAGCTGGGAACCTGA...........................................................................1930.330.33------------------------------------------------------------------------------------------------------------------------0.33
........................................................................................................................................................................................................................................................AAGAAGGGAAGCTGGGA.................................................................................1740.250.25-----------------------------------------0.25-------------------------------------------------------------------------------
............................................................................................ACTGAACGGGAGGG................................................................................................................................................................................................................................................1460.170.17------------------------------------------0.17------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................CCTGCAGACCAAGGC.......15100.100.10----------------------------------------0.10--------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................CTGGACATGGAGGCAT................................16100.100.10---------------------------------------------------------------------0.10---------------------------------------------------

Antisense strand
AGTGGCCGAAAAAGTGAGGACAATCCGCAAATACCGGAGCCGGCCCCTTTGTGAGTACCCAGGGTACTGAGAGCAGTACAGATAGAGCTTTGACTGAACGGGAGGGTTCAGGGGAGAACTCCCTGTCCAGATGTGTATTTCCATACACTTGCTGGTTCCCCATTCTCTCCTTGCCTCTGCAGAGGCCTTCCTGCCCAACATCTGTCTCAGTCCACAGCCTGATCTTCTGCCCGGTGTGTGTGTAGAGGAAGAAGGGAAGCTGGGAACCTGACTGCCTCTCCCTCTTTACCCACTAGGCCTGGACATGGAGGCATCCCCCAATCACCTGCAGACCAAGGCCTATGTG
........................................................................................................................................................................................................................................((((.(((...(((((.((.(((..((..((....))..)).))))).))))).))).))))....................................................
.....................................................................................................................................................................................................................................230...............................................................296................................................
SizePerfect hitTotal NormPerfect NormGSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR343335SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR038860(GSM458543)
MM426. (cell line)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR189783SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR037935(GSM510473)
293cand3. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553576(SRX182782)
source: Testis. (testes)
SRR040031(GSM532916)
G013T. (cervix)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR343334SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
TAX577579(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR038857(GSM458540)
D20. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
................................................................................................................................................................................................................................................TGTAGAGGAAGAAGGGAATCG..................................................................................... 213.000.00---------------------------------------------------------------2.00----------------------------------------1.00----------------
..........AAAGTGAGGACAATCCGCAAATACC....................................................................................................................................................................................................................................................................................................................... 2512.002.00-----------------------------------------------------------------2.00-------------------------------------------------------
............................................................................................................................................................................................................................GATCTTCTGCCCG................................................................................................................. 1392.002.00---------------------------------------2.00---------------------------------------------------------------------------------
............................................................................................................................................................................................................................GATCTTCTGCCCGGT............................................................................................................... 1521.001.00---------------------0.50-----------------0.50---------------------------------------------------------------------------------
..................................................................................................CGGGAGGGTTCAGGGATC...................................................................................................................................................................................................................................... 181.000.00-------------------------------------------------------------------------------------------1.00-----------------------------
.........................................................................................................................................................GGTTCCCCATTCTCTGGT............................................................................................................................................................................... 181.000.00---------------------------------------------------1.00---------------------------------------------------------------------
........................................................................................................................................................................................................................GCCTGATCTTCTGCCCGGTG.............................................................................................................. 2011.001.00-------------------------------------1.00-----------------------------------------------------------------------------------
........................................................................................................................................................................................................................GCCTGATCTTCTGCCCGGTGTG............................................................................................................ 2211.001.00--------------------------------------------1.00----------------------------------------------------------------------------
........................................................................................................................................................................................................................GCCTGATCTTCTGCCCGGTGTGTGTGTAGA.................................................................................................... 3011.001.00-------1.00-----------------------------------------------------------------------------------------------------------------
.........AAAAGTGAGGACAATCC................................................................................................................................................................................................................................................................................................................................ 171.000.00--------------------------------------------------------------1.00----------------------------------------------------------
............................................................................................................................................................................................................................GATCTTCTGCCCGG................................................................................................................ 1440.500.50-----------------------0.250.25------------------------------------------------------------------------------------------------
..............................ATACCGGAGCCGG............................................................................................................................................................................................................................................................................................................... 1330.330.33--------------------------------------------------------------------0.33----------------------------------------------------
...........................................................................................................................................................................................TTCCTGCCCAACATCT............................................................................................................................................... 1650.200.20----------------------------------------0.20--------------------------------------------------------------------------------