ID: hsa-mir-6848
GENE: DGAT1(3)
chr8:145540866-145541045-


(3)
AGO2.ip
(15)
B-CELL
(3)
BRAIN
(9)
BREAST
(37)
CELL-LINE
(4)
CERVIX
(5)
HEART
(2)
HELA
(8)
LIVER
(2)
OTHER
(1)
RRP40.ip
(24)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
GTGGCTGAGCTCATGCAGTTTGGAGACCGGGAGTTCTACCGGGACTGGTGGTGAGTGTCCCTGGGGTGTCCCTGGGGGCTGGGATGGGCCATGGTGTGCTCTGATCCCCCTGTGGTCTCTTGGCCCCCAGGAACTCCGAGTCTGTCACCTACTTCTGGCAGAACTGGAACATCCCTGTGC
...................................................................((.(((((((((..(((..((((((((...............)))))))))))..))))))))).))..............................................
...................................................................68...................................................................137.........................................
SizePerfect hitTotal NormPerfect NormSRR343337SRR343336SRR343335SRR343334SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR038861(GSM458544)
MM466. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR038860(GSM458543)
MM426. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR553576(SRX182782)
source: Testis. (testes)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
SRR189785SRR038862(GSM458545)
MM472. (cell line)
SRR189787SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR189782SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
TAX577740(Rovira)
total RNA. (breast)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577588(Rovira)
total RNA. (breast)
GSM956925Ago2D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040029(GSM532914)
G026T. (cervix)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
GSM956925PAZD5GSM532878(GSM532878)
G691T. (cervix)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR040028(GSM532913)
G026N. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189786SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
........................................................................TGGGGGCTGGGATGGGCCATGGT.....................................................................................23117.0017.00----3.00---2.00-----1.00-------3.00---------2.00-------1.00-----------------1.00-----------------1.00-------------1.00---1.00-1.00----------------------
........................................................................TGGGGGCTGGGATGGGCCATGGTGT...................................................................................25112.0012.00----1.00--1.00-1.00--4.00-------------1.00-----------1.00---------------------------------1.00----1.00-----------------1.00-----------------------
......................................................................CCTGGGGGCTGGGATGGGCCATGG......................................................................................2418.008.00---------2.00----------1.00----------1.00-----1.00-1.00-----1.00----------1.00--------------------------------------------------------------
........................................................................TGGGGGCTGGGATGGGCCATGGTG....................................................................................2417.007.00---------------1.00------------1.00--------------1.001.00---------------------1.00--------------------------------1.001.00------------------
..................................................GTGAGTGTCCCTGGGGTGTCCCTGGGGGCTGGGATGGGCCATGGTGTGCTCTGATCCCCCTGTGGTCTCTTGGC........................................................7416.006.00-----6.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................GTGGTCTCTTGGCCCCCAGTTT...............................................226.000.00-------------3.00-------------------------------------------------------1.00------------------1.00--------------1.00---------------
......................................................................CCTGGGGGCTGGGATGGGC...........................................................................................1916.006.00------6.00----------------------------------------------------------------------------------------------------------------
.................................TTCTACCGGGACTGGTG..................................................................................................................................1715.005.00---------------------------------2.00----1.00--2.00-----------------------------------------------------------------------------
...............................................................................................................GTGGTCTCTTGGCCCCCAGTT................................................214.000.00----------4.00------------------------------------------------------------------------------------------------------------
.......................................................................CTGGGGGCTGGGATGGGCCATGGT.....................................................................................2414.004.00--------------------1.00-------1.00--1.00-----------1.00---------------------------------------------------------------------------
......................................................................CCTGGGGGCTGGGATGGGCCATGGT.....................................................................................2513.003.00----------------------------------1.00--------------------------------------------------1.00---1.00-----------------------------
........................................................................TGGGGGCTGGGATGGGCCATGG......................................................................................2213.003.00---------1.00-------------------------------------2.00-----------------------------------------------------------------------
.....................................................................CCCTGGGGGCTGGGATGGGCCATGGTG....................................................................................2713.003.00-------3.00---------------------------------------------------------------------------------------------------------------
.......................................................................................................ATCCCCCTGTGGTCTAGTG..........................................................192.000.00-------------------2.00---------------------------------------------------------------------------------------------------
........................................................................TGGGGGCTGGGATGGGCCATG.......................................................................................2112.002.00---------------------2.00-------------------------------------------------------------------------------------------------
.................................................................................................................................................CACCTACTTCTGGCAGAAC................1912.002.00-----------------2.00-----------------------------------------------------------------------------------------------------
.......................................................................CTGGGGGCTGGGATGGGCCATGGTA....................................................................................2512.004.00-----------------------------2.00-----------------------------------------------------------------------------------------
......................................................................CCTGGGGGCTGGGATGGGCCATG.......................................................................................2312.002.00---------------------1.00-----------------1.00-------------------------------------------------------------------------------
......................................................................CCTGGGGGCTGGGATGGGCCATGGTT....................................................................................2612.003.00------------------------------------------------------------1.00---------------------------------------------1.00------------
........................................................................TGGGGGCTGGGATGGGCCATGGTGTAAA................................................................................2812.0012.00----2.00------------------------------------------------------------------------------------------------------------------
........................................................................TGGGGGCTGGGATGGGCCATGGTGA...................................................................................2512.007.00--------------------------1.00-----------------------------------------------------------------1.00--------------------------
.......................................................................CTGGGGGCTGGGATGGGCCATGGTG....................................................................................2512.002.00---------------------------------------------------------------------------1.00-------------------------1.00-----------------
.....................................................................................................................................................TACTTCTGGCAGAACTGGAACATCCCTGT..2912.002.00-----------------------2.00-----------------------------------------------------------------------------------------------
...............................................................................................................GTGGTCTCTTGGCCCCCAGT.................................................201.000.00-------------------------------------1.00---------------------------------------------------------------------------------
........................................................................TGGGGGCTGGGATGGGCCATAAAA....................................................................................241.000.00--------1.00--------------------------------------------------------------------------------------------------------------
.........................................................................................................CCCCCTGTGGTCTCTTTGT........................................................191.000.00-------------------------------------------------------1.00---------------------------------------------------------------
........................................................................TGGGGGCTGGGATGGGCCATGGTAC...................................................................................2511.0017.00---------------------------1.00-------------------------------------------------------------------------------------------
....................................................................................................................................................CTACTTCTGGCAGAACTGGAACATCCCTGT..3011.001.00------------------------------------------------------------------------------------------------------1.00----------------
...................TTGGAGACCGGGAGTTCTACC............................................................................................................................................2111.001.00-------------------------------------------------------------1.00---------------------------------------------------------
......................................................................................................................................................ACTTCTGGCAGAACTGGAACATCCCTGTG.2911.001.00--------------------------------------------------------------------------------------1.00--------------------------------
.TGGCTGAGCTCATGCAGTTTGGAGACC........................................................................................................................................................2711.001.00---------------------------------------------------------1.00-------------------------------------------------------------
......................................................................CCTGGGGGCTGGGATGGGCCATGGTA....................................................................................2611.003.00--------------------------------------------1.00--------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAACT...............1911.001.00--------------------------------------------------------------1.00--------------------------------------------------------
......................................................................CCTGGGGGCTGGGATGGGCCATTT......................................................................................241.000.00----------------------------------------------1.00------------------------------------------------------------------------
...........................................................................................................................................................TGGCAGAACTGGAACACTTC.....201.000.00-------------------------------------------------1.00---------------------------------------------------------------------
....................................TACCGGGACTGGTGGTGTAA............................................................................................................................201.000.00---------------1.00-------------------------------------------------------------------------------------------------------
.....................................................................CCCTGGGGGCTGGGATGGGCCAT........................................................................................2311.001.00----------------------------------------------------------------------------------1.00------------------------------------
...........................................................................................................................................................TGGCAGAACTGGAACTCTG......191.000.00---------------------------------------------------------------1.00-------------------------------------------------------
.............................................................................................................CTGTGGTCTCTTGGCCCCCA...................................................2011.001.00-------------------1.00---------------------------------------------------------------------------------------------------
........................................................................TGGGGGCTGGGATGGGCCATGCTGT...................................................................................2511.002.00----------------------------------1.00------------------------------------------------------------------------------------
.....................................................................CCCTGGGGGCTGGGATGGGCCATGGTA....................................................................................271.000.00---------------------------------------------------------------------------------------------------------1.00-------------
.......................................................................CTGGGGGCTGGGATGGGCCAT........................................................................................2111.001.00-----------------------------------------------------------------1.00-----------------------------------------------------
........................................................................TGGGGGCTGGGATGGGCCATGGTGTAT.................................................................................2711.0012.00------------------------------------1.00----------------------------------------------------------------------------------
............................................................................................................................................................GGCAGAACTGGAACATCCCTGTG.2311.001.00---------------------------------------------------1.00-------------------------------------------------------------------
...........................................................................................................................................................TGGCAGAACTGGAACATCCCTGTGC2511.001.00-----------------------1.00-----------------------------------------------------------------------------------------------
........................................................................TGGGGGCTGGGATGGGCCATGGTA....................................................................................2411.0017.00-------------------------------------------------------------------------------------------------1.00---------------------
.......................................................................CTGGGGGCTGGGATGGGCCATGGTAAT..................................................................................2711.004.00----1.00------------------------------------------------------------------------------------------------------------------
......................................................................CCTGGGGGCTGGGATGGGCCATGGTG....................................................................................2611.001.00-------1.00---------------------------------------------------------------------------------------------------------------
..................................TCTACCGGGACTGGT...................................................................................................................................1511.001.00--------------------------------------------------------------------------------------------------1.00--------------------
.............................................................................................................................................................GCAGAACTGGAACATCCCTGAGC231.000.00--------------------------------------------------------------------1.00--------------------------------------------------
....................................................................TCCCTGGGGGCTGGGATGGGCCATGGT.....................................................................................2711.001.00-------1.00---------------------------------------------------------------------------------------------------------------
.......................................................................CTGGGGGCTGGGATGGGCCATGGTAA...................................................................................2611.004.00---------------1.00-------------------------------------------------------------------------------------------------------
................................GTTCTACCGGGACTGGTG..................................................................................................................................1811.001.00------------------------------------------------------------------------------1.00----------------------------------------
.TGGCTGAGCTCATGCAGTT................................................................................................................................................................1911.001.00------------------------------------1.00----------------------------------------------------------------------------------
......GAGCTCATGCAGTTTGGAGAC.........................................................................................................................................................2111.001.00----------------------------------------------1.00------------------------------------------------------------------------
...............................................................................................................GTGGTCTCTTGGCCCCCAGTAA...............................................221.000.00----------------------------------------------------------------------1.00------------------------------------------------
.................GTTTGGAGACCGGGAGTT.................................................................................................................................................1811.001.00---------------------------------------------------------------------------------------------1.00-------------------------
.............TGCAGTTTGGAGACCGGGAGTTCTAA.............................................................................................................................................261.000.00--------------------------------------------------------------------------------------------------------1.00--------------
......................................................................CCTGGGGGCTGGGATGGGCCATGGA.....................................................................................2511.008.00---------------1.00-------------------------------------------------------------------------------------------------------
....................TGGAGACCGGGAGTTCTACC............................................................................................................................................2011.001.00------------------------------------------------1.00----------------------------------------------------------------------
....CTGAGCTCATGCAGTTTGGAGACCGGGA....................................................................................................................................................2811.001.00--------------------------------------------------1.00--------------------------------------------------------------------
....................................................................TCCCTGGGGGCTGGGATGGTT...........................................................................................211.000.00--------1.00--------------------------------------------------------------------------------------------------------------
.......................................................................CTGGGGGCTGGGATGGGCCATGG......................................................................................2311.001.00--------1.00--------------------------------------------------------------------------------------------------------------
........................................................................TGGGGGCTGGGATGGGCCATGGCGC...................................................................................2511.003.00-------------------------------------------------------------------1.00---------------------------------------------------
...............................................................................................................GTGGTCTCTTGGCCCCCAGTTTA..............................................231.000.00-------------------------------------------------------------------------1.00---------------------------------------------
........................................................................TGGGGGCTGGGATGGGCCATGGA.....................................................................................2311.003.00--------------------1.00--------------------------------------------------------------------------------------------------
.........................................................................................................CCCCCTGTGGTCTCTTGGCCCCCATT.................................................261.000.00---------------------------------------------1.00-------------------------------------------------------------------------
............................................................................................................CCTGTGGTCTCTTGGCCCCCAGA.................................................231.000.00-----------------------------------------------------------1.00-----------------------------------------------------------
.....................................................................CCCTGGGGGCTGGGATGGGCCATG.......................................................................................2411.001.00---------------------------------------------------------------------------------1.00-------------------------------------
...........................................................CCTGGGGTGTCCCTGGG........................................................................................................1730.330.33-------------------------------------------------0.33---------------------------------------------------------------------
..............................................................................................................................................................CAGAACTGGAACATC.......1570.140.14---------------------------------------------------0.14-------------------------------------------------------------------

Antisense strand
GTGGCTGAGCTCATGCAGTTTGGAGACCGGGAGTTCTACCGGGACTGGTGGTGAGTGTCCCTGGGGTGTCCCTGGGGGCTGGGATGGGCCATGGTGTGCTCTGATCCCCCTGTGGTCTCTTGGCCCCCAGGAACTCCGAGTCTGTCACCTACTTCTGGCAGAACTGGAACATCCCTGTGC
...................................................................((.(((((((((..(((..((((((((...............)))))))))))..))))))))).))..............................................
...................................................................68...................................................................137.........................................
SizePerfect hitTotal NormPerfect NormSRR343337SRR343336SRR343335SRR343334SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR038861(GSM458544)
MM466. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR038860(GSM458543)
MM426. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR553576(SRX182782)
source: Testis. (testes)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
SRR189785SRR038862(GSM458545)
MM472. (cell line)
SRR189787SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR189782SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
TAX577740(Rovira)
total RNA. (breast)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577588(Rovira)
total RNA. (breast)
GSM956925Ago2D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040029(GSM532914)
G026T. (cervix)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
GSM956925PAZD5GSM532878(GSM532878)
G691T. (cervix)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR040028(GSM532913)
G026N. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189786SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
..................................................................................................................................................ACCTACTTCTGGCAGAAGC............... 19335.000.00145.00145.0024.0021.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAACAGC............. 21157.000.0058.0058.0020.0021.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAAAGC.............. 20110.000.0035.0028.0026.0021.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAAGCC.............. 2064.000.0026.0023.007.008.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAACAGCC............ 2248.000.0016.0014.008.0010.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAAAGCC............. 2133.000.0010.0013.006.004.00-------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CTACTTCTGGCAGAACTTAG............ 2017.000.003.003.001.001.00-------2.00--3.00---3.00------1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAA................. 1717.000.005.002.004.006.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAAA................ 1816.000.002.008.003.003.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAACA............... 1912.000.001.005.003.003.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAAGCA.............. 2010.000.005.001.001.003.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGA.................. 1629.509.503.004.002.000.50-------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CTACTTCTGGCAGAACT............... 178.000.001.00-3.00--------1.00------------1.00-------------------------------------------------1.00----------------1.00---------------------------
....................................................................................................................................................CTACTTCTGGCAGAACTT.............. 188.000.001.002.003.001.00-------------1.00-----------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAAG................ 188.000.003.004.001.00--------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAGC................ 187.780.002.441.562.001.78-------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CTACTTCTGGCAGAAC................ 1637.677.671.000.672.331.67------------0.33-------------------------------------------------------------------------------------------0.330.67---0.33-0.33---
..................................................................................................................................................ACCTACTTCTGGCAGAACTAGC............ 2215.000.004.001.00---------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAACAGA............. 215.000.002.001.002.00--------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TACTTCTGGCAGAAC................ 1544.004.000.250.252.251.25-------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CTACTTCTGGCAGAACTTA............. 194.000.00-------------------------1.00----------------2.00--------------------------------------------1.00-------------------------------
...................................................................................................................................................CCTACTTCTGGCAGAAC................ 1733.333.330.671.000.330.33-------------------------------------------------------------------------------------------------------0.330.33-----0.33----
..................................................................................................................................................ACCTACTTCTGGCAGAAAGCA............. 213.000.00--1.002.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAAC................ 1823.003.00-0.500.501.00-------------------------------------------------------------------------------------------------------0.50--0.50--------
..................................................................................................................................................ACCTACTTCTGGCAGAA................. 1722.502.500.500.501.50--------------------------------------------------------------------------------------------------------------------
..........................CCGGGAGTTCTACCGCT......................................................................................................................................... 172.000.00-----------1.00------------1.00----------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAACAGCA............ 222.000.00--2.00--------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CTACTTCTGGCAGAACTTAA............ 202.000.00-----------------------------------2.00-----------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAACAG.............. 202.000.00-1.001.00--------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CTACTTCTGGCAGAACA............... 172.000.00---2.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAGCC............... 191.670.000.670.330.330.33-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CCTACTTCTGGCAGA.................. 1581.621.620.250.380.380.38----------------------------------------------0.12------------------------------------------------------------------0.12-
....................................................................................................................................................CTACTTCTGGCAGAA................. 1571.571.57--0.430.86----------------------------------------------0.14-----------------------------------------------------------------0.14--
....................................................................................................................................................CTACTTCTGGCAGAATTAG............. 191.430.000.290.430.290.43-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CCTACTTCTGGCAGAA................. 1641.251.251.25----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CCTACTTCTGGCAGAACCAGC............ 211.000.00-1.00---------------------------------------------------------------------------------------------------------------------
.............................................................................GCTGGGATGGGCCATGGTGTGCTC............................................................................... 2411.001.00------------------------------------------------------1.00----------------------------------------------------------------
..........................................................................................................................................................CTGGCAGAACTGGAACATT....... 191.000.00----------------------------------------------------------------1.00------------------------------------------------------
.....................................................................................................................................CTCCGAGTCTGTCACCA.............................. 171.000.00------------------------------------------------------------------------------------1.00----------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAACCC.............. 201.000.00--1.00--------------------------------------------------------------------------------------------------------------------
...............................................................................TGGGATGGGCCATGGTG.................................................................................... 1711.001.00-----------------------------------------------------1.00-----------------------------------------------------------------
...........................CGGGAGTTCTACCGGGA........................................................................................................................................ 1711.001.00-----------------------------------------------------------------------1.00-----------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAAAC............... 191.000.00-1.00---------------------------------------------------------------------------------------------------------------------
..................................................................................................CTCTGATCCCCCTGTGGT................................................................ 1821.001.00-----------------------------------------------------------------------------------1.00-----------------------------------
..........................................................................................................................GCCCCCAGGAACTCCG.......................................... 1611.001.00------------------------------1.00----------------------------------------------------------------------------------------
.................................................................................GGATGGGCCATGGTGTTTGA............................................................................... 201.000.00----------------------------------------1.00------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAACCT.............. 201.000.00--1.00--------------------------------------------------------------------------------------------------------------------
.........................................................................................................................GGCCCCCAGGAACTCCGAG........................................ 1911.001.00----------------1.00------------------------------------------------------------------------------------------------------
..............................................................................................................................................TGTCACCTACTTCTGGCAGA.................. 2011.001.00-------------1.00---------------------------------------------------------------------------------------------------------
....................................................................................................................................................CTACTTCTGGCAGAACTGGAA........... 2111.001.00----------------1.00------------------------------------------------------------------------------------------------------
...GCTGAGCTCATGCAGTTTGGAGACCGGGAG................................................................................................................................................... 3011.001.00----------------1.00------------------------------------------------------------------------------------------------------
................................................................................................................TGGTCTCTTGGCCCCCGATT................................................ 201.000.00------------------------------1.00----------------------------------------------------------------------------------------
..................................................................................GATGGGCCATGGTGTGCTC............................................................................... 1911.001.00--------------------------------------------------------------------------------1.00--------------------------------------
.......................................................................................GCCATGGTGTGCTCTGATTAC........................................................................ 211.000.00---------------------------1.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................CTGGCAGAACTGGAAGTGT....... 191.000.00-------------------------------------------------------------------------------1.00---------------------------------------
....................................TACCGGGACTGGTGGTGAGTG........................................................................................................................... 2111.001.00----------------------------------------------------1.00------------------------------------------------------------------
....................................................................................................................................................CTACTTCTGGCAGAATT............... 170.570.00-0.29-0.29-------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................GTCTGTCACCTACTTCTG....................... 1820.500.50------------------------------------------------0.50----------------------------------------------------------------------
.....................................................................................................................................................TACTTCTGGCAGAACATC............. 180.500.00---------------------------------------------------------------------------------------------------------------0.50-------
..................................................................................................................................................ACCTACTTCTGGCAG................... 1590.330.33--0.110.11------------------------------------------------------------------------------------------------------------------0.11
.....................................................................................................................................................TACTTCTGGCAGAACT............... 1630.330.33----------------------------------------------------------------------------------------------------------------0.33------
....................................................................................................................................................CTACTTCTGGCAGAATAGC............. 190.290.00---0.29-------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CTACTTCTGGCAGAATTA.............. 180.140.00------------------------0.14----------------------------------------------------------------------------------------------
....................................................................................................................................................CTACTTCTGGCAGAATTAT............. 190.140.00-------------------------0.14---------------------------------------------------------------------------------------------
...................................................................................................................................................CCTACTTCTGGCAGACAGC.............. 190.120.000.12----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGAGCA............... 190.110.00--0.11--------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................ACCTACTTCTGGCAGACC................ 180.110.00---0.11-------------------------------------------------------------------------------------------------------------------