ID: hsa-mir-6817
GENE: BC037884
chr22:25851479-25851728+


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(4)
AGO2.ip
(11)
B-CELL
(11)
BRAIN
(14)
BREAST
(39)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(4)
HEART
(2)
HELA
(4)
LIVER
(4)
OTHER
(31)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
AAGGCAGCATAGCACTGAGTTCTAGATAACTGAGGGGATTTTGCACTTGGATTTGCTGTGCTAAGGTTTGGGTGGGGCTATTACATCTTGCCGGGCTGGGCAAGAGTGAACCCTAGGGGTCAACATCAGTAGCCAGGATTCTGCCATAGGAAGCTTGGAGTGGAACTGACCTGCCCCCTTTCTCTCTGACTCCATGGCAGCTGGGTGAGCTATGAACAGGCCAACTGCAAGGGCGAGCAGTTTGTGTTTG
............................................................................................................................................(((((((.((.((.((((((.((((.............)))).)))))))))))))))))..................................................
......................................................................................................................................135..............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038863(GSM458546)
MM603. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577745(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038861(GSM458544)
MM466. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR189786SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)
SRR040013(GSM532898)
G648T. (cervix)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040024(GSM532909)
G613N. (cervix)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)
SRR038857(GSM458540)
D20. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038862(GSM458545)
MM472. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR038860(GSM458543)
MM426. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATT.................................................21162.009.00-5.005.003.005.00-1.00-1.003.00--4.003.003.003.002.00--1.001.00--1.00--1.00--2.00------1.00--1.00---1.00--2.00-2.00------2.001.001.00-----------1.00-----1.00-----1.00---1.00-1.00---------------1.00-------1.00--------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGT.................................................21153.0010.0016.00-2.001.00-3.002.002.001.00-------1.00--1.00-2.00---1.00---1.001.001.00-1.001.001.00----1.00----1.00---2.001.00------------1.00----1.00---1.00-1.00--1.00------------1.00-----------1.00----1.00--1.00--1.00------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGA.................................................21136.0010.0013.00-----4.00------------2.00----2.00---1.00--2.002.00-----------------1.00-1.001.00--1.00--1.00----------------1.00--1.00--1.00---1.00-------1.00-------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAT..................................................20126.009.001.0010.001.001.004.00--1.00-2.00---1.00------1.001.00-1.00--------------------1.00-----------------------------------------------------1.00---------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAA..................................................20118.009.006.00--------2.00-----1.00--1.00------------------2.00---2.00--1.00----------------------------------------------1.001.00-------------------1.00-------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAAA.................................................21113.009.00----------6.00------4.00---------1.00-------------------------------------------------------------------------1.00---1.00--------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAG..................................................20110.0010.00---1.00-----------1.00----1.00-------------------1.00----1.00------1.001.001.00----------------------------1.00----------------1.00-------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAAT.................................................21110.009.00--------1.00-----------------2.00---1.00----2.00--1.00---------------------------1.001.00----------------------------------------1.00-----------------
...........................................................................................................................................TCTGCCATAGGAAGCTTGGAGTGG.......................................................................................24210.0010.00---0.50-1.50-4.00-----------------------------0.50--------------------0.50--0.501.00-----------------------------------------------------0.50-0.500.50------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCA...................................................1919.009.004.00-------------1.00-------1.00-1.00------------------------------------------------------------------------1.00-1.00--------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATTT................................................2217.009.00--1.00-------------2.00-1.00------2.00---------------------1.00------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAATT................................................2216.009.001.00----2.00--1.00---------1.00-----------1.00-----------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGTATC..............................................2416.0010.00-----------6.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGC.................................................2115.005.003.00-------------------------------1.00------------------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGTT................................................2215.0010.002.00----------------------1.00-------------------1.00----------1.00-----------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGTA................................................2214.0010.00--------------------1.00-------------1.00----1.00----------------------------------------------------------------1.00---------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAAAA................................................2214.009.00-----2.00---------------------1.00------------------------------------------------------------------------------1.00-------------------
...................................................................................................................................................................................TTCTCTCTGACTCCATGGCAGA.................................................2214.002.003.00--------------------------------------------------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATA.................................................2113.009.00--------2.00---------------------------------------------------------------------------1.00-----------------------------------------
.........................................................................................................................................................CTTGGAGTGGAACTGACCTGA............................................................................213.000.00----------------------3.00-------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAATAA...............................................2312.009.00----------------------------2.00-------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATAA................................................2212.009.00--------1.00------------------1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATTA................................................2212.009.00-----------------------------------------------------------------------1.00---------------------1.00--------------------------------
...................................................................................................................................................................................TTCTCTCTGACTCCATGGCA...................................................2012.002.00-------------1.00---------------------------------------------------------------------------------1.00------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGCAA...............................................2312.005.00------------2.00-----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTCTCTCTGACTCCATGGCAG..................................................2112.002.00------------------------------------------1.00-----------------1.00-----------------------------------------------------------------
...................................................................................................................................................................................TTCTCTCTGACTCCATGGCAGT.................................................2212.002.00--1.00-----------------------------------------------------------------------------1.00---------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGCA................................................2211.005.00----------------------------------------------------------------------------------------1.00-------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAAC.................................................2111.009.00---1.00--------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCCGTA................................................221.000.00----------------------------------1.00-------------------------------------------------------------------------------------------
.............................................................................................................................................................................CCCCCTTTCTCTCTGACTCCATGGA....................................................251.000.00------------------------------------1.00-----------------------------------------------------------------------------------------
..........................................................................................................................................TTCTGCCATAGGAAGCTTGGAG..........................................................................................2221.001.00-------------------------------------------------------------------------------------------------------------------0.50----0.50-----
...................................................................................................................................................................................TTCTCTCTGACTCCATGGCATTT................................................2311.002.00------------------------------------------1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGGAA...............................................2311.0010.00--------------1.00---------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGG.................................................2111.0010.00---------------------1.00--------------------------------------------------------------------------------------------------------
...........................................................................................................................................TCTGCCATAGGAAGCTTGGAGCGGA......................................................................................251.000.00----------------------------------------------------------------------1.00-------------------------------------------------------
...........................................................................................................................................TCTGCCATAGGAAGCTTGGAGTGA.......................................................................................241.000.00----------------------------------------------------------1.00-------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCACT.................................................2111.009.00------------------------------------------------------------------------------------------------------------------1.00-----------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATAT................................................2211.009.00------------------------------------------------------------------------------------------------1.00-----------------------------
...................................................................................................................................................................................TTCTCTCTGACTCCATGGCAAT.................................................2211.002.001.00-----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TGGGTGAGCTATGAACAGGCC............................2111.001.00-------------------------------------------------------------------------1.00----------------------------------------------------
................................................................................................................................................................................CCTTTCTCTCTGACTCCATGGCAGA.................................................251.000.00-------------------------------------------------------------1.00----------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATCA................................................2211.009.00-----------------------------------------------1.00------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATC.................................................2111.009.00---------------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCGTTT................................................221.000.00----------------------------------------------------------------1.00-------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATTTC...............................................2311.009.00---------------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCCGC.................................................211.000.00-----------------------------------------------------------------1.00------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCCGA.................................................211.000.00------------------------------------------------------------------------------1.00-----------------------------------------------
...................................................................................................................................................................................TTCTCTCTGACTCCATGGCAT..................................................2111.002.00-----------------------------------------------------------------------------------------1.00------------------------------------
..................................................................................................................................................................................TTTCTCTCTGACTCCATGGCATT.................................................231.000.00------------------1.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAAG.................................................2111.009.00---1.00--------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGAT................................................2211.0010.00-------------------------------------------------------------------------------------------------------------1.00----------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAATA................................................2211.009.00--------------------------------------1.00---------------------------------------------------------------------------------------
......................................................................................................................................................................................TCTCTGACTCCATGGCAGAAA...............................................2130.670.33------------------------------------0.67-----------------------------------------------------------------------------------------
......................................................................................................................................................................................TCTCTGACTCCATGGCAGATT...............................................2130.670.33-------0.67----------------------------------------------------------------------------------------------------------------------
..............................................................................................GCTGGGCAAGAGTGAACCCTAGGGGTCA................................................................................................................................2820.500.50-------------------------------------------------------------------------------------------------------------------------0.50----
...........................................................................................................................................TCTGCCATAGGAAGCTTGGA...........................................................................................2020.500.50------0.50-----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGG.....................................................1720.500.50------------------------------------------------------------0.50-----------------------------------------------------------------
...........................................................................................................................................TCTGCCATAGGAAGCTTGGAGTGGA......................................................................................2520.500.50--------------------------------------------------------------------------------------------------------------------------0.50---
............................................................................................................................................CTGCCATAGGAAGCTTGGAGTGG.......................................................................................2320.500.50-----------------------------------------------------------0.50------------------------------------------------------------------
.............................................................................................................................................TGCCATAGGAAGCTTGGAGTGG.......................................................................................2220.500.50-----------------------0.50------------------------------------------------------------------------------------------------------
..........................................................................................CCGGGCTGGGCAAGAGTGAACCCTAGGGGTCAAC..............................................................................................................................3420.500.50---------------------------------------------------------0.50--------------------------------------------------------------------
.......................AGATAACTGAGGGGATTTTGCACTTGG........................................................................................................................................................................................................2720.500.50---------------------------------------------------------------------------------------------------------------------0.50--------
......................................................................................................................................................................................TCTCTGACTCCATGGCAGAACT..............................................2230.330.33--------------------------------------0.33---------------------------------------------------------------------------------------
......................................................................................................................................................................................TCTCTGACTCCATGGCAGAATT..............................................2230.330.33---------------------------------------------------------------------------------------------------------------------------0.33--
......................................................................................................................................................................................TCTCTGACTCCATGGCAG..................................................1830.330.33------0.33-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................TGACCTGCCCCCTTTCT...................................................................1740.250.25----------------------------------------------------------------------------------------------------------------------------0.25-
........................................................................................................................................................GCTTGGAGTGGAACTCTG................................................................................1860.170.17-----------------------------------------------------------------------------------------------------------------------------0.17
...........................................................................................................................................................................................................GGTGAGCTATGAACAG...............................1660.170.17--------------------------------------------------------------0.17---------------------------------------------------------------
........................................................................................................................................................GCTTGGAGTGGAACT...................................................................................1560.170.17---------------------------------------------------------------0.17--------------------------------------------------------------
.................................................................GTTTGGGTGGGGCTA..........................................................................................................................................................................1570.140.14------------------------0.14-----------------------------------------------------------------------------------------------------

Antisense strand
AAGGCAGCATAGCACTGAGTTCTAGATAACTGAGGGGATTTTGCACTTGGATTTGCTGTGCTAAGGTTTGGGTGGGGCTATTACATCTTGCCGGGCTGGGCAAGAGTGAACCCTAGGGGTCAACATCAGTAGCCAGGATTCTGCCATAGGAAGCTTGGAGTGGAACTGACCTGCCCCCTTTCTCTCTGACTCCATGGCAGCTGGGTGAGCTATGAACAGGCCAACTGCAAGGGCGAGCAGTTTGTGTTTG
............................................................................................................................................(((((((.((.((.((((((.((((.............)))).)))))))))))))))))..................................................
......................................................................................................................................135..............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038863(GSM458546)
MM603. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577745(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038861(GSM458544)
MM466. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR189786SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)
SRR040013(GSM532898)
G648T. (cervix)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040024(GSM532909)
G613N. (cervix)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)
SRR038857(GSM458540)
D20. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038862(GSM458545)
MM472. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR038860(GSM458543)
MM426. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
......................................................GCTGTGCTAAGGTTTGGGT................................................................................................................................................................................. 1920.500.50---0.50--------------------------------------------------------------------------------------------------------------------------