ID: hsa-mir-6812
GENE: PIGT(10)
chr20:44054014-44054263+


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(4)
AGO2.ip
(1)
AGO3.ip
(8)
B-CELL
(6)
BRAIN
(27)
BREAST
(47)
CELL-LINE
(10)
CERVIX
(1)
FIBROBLAST
(7)
HEART
(2)
HELA
(6)
LIVER
(1)
OTHER
(1)
RRP40.ip
(28)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
TGCTCTCCCTCCCCTTGCCCCCCGCCCGCCGCTCCCCTTTATCAGGTTTAGAGATTGAGCTATGCCTTCTGTTGAAAGGTTTTGAGCCTAAGAGAACATTGGAAACACTGTGTTGCATTGCCCAATACTGCCGGAATGAGGATGGGGTGAGATGGGGAGGAGCAGCCAGTCCTGTCTCACCGCTCTTCCCCTGACCCCAGGTTCCCAGTCTCTGATGGCTCTAACTACTTTGTGCGGCTCTACACGGAGC
..............................................................................................................................................((((((.....((((((((((((.((....)).))....))))))))))..))))))...................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR189782SRR037936(GSM510474)
293cand1. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM956925PAZD5GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR029131(GSM416760)
MCF7. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR040009(GSM532894)
G727T. (cervix)
SRR191579(GSM715689)
102genomic small RNA (size selected RNA from . (breast)
SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037931(GSM510469)
293GFP. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577742(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
GSM532884(GSM532884)
G871T. (cervix)
TAX577740(Rovira)
total RNA. (breast)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR040032(GSM532917)
G603N. (cervix)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)
SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
GSM416733(GSM416733)
HEK293. (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191526(GSM715636)
127genomic small RNA (size selected RNA from . (breast)
SRR040041(GSM532926)
G612T. (cervix)
SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR040028(GSM532913)
G026N. (cervix)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191524(GSM715634)
119genomic small RNA (size selected RNA from . (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM532876(GSM532876)
G547T. (cervix)
...................................................................................................................................................................................CCGCTCTTCCCCTGACCCCAGT.................................................22163.008.003.00----1.00-2.002.004.00-2.00---1.00--1.00---3.00-3.00-1.00--1.00---1.001.00-2.00--2.00--2.002.001.00-1.002.00-2.001.00---2.00-1.00--1.00----1.00--1.001.001.00--1.001.00----------1.00-1.00-----1.00---------1.00---1.001.001.00---1.00---1.00------------1.00-------1.001.00----------
...................................................................................................................................................................................CCGCTCTTCCCCTGACCCCAGA.................................................22116.008.004.00---1.00-1.001.00-------1.00------------------------------1.00---1.00---------------------------1.00-------------------1.00------------------------1.00----------1.00------1.00---1.00---
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAGC....................................................................................25115.0015.003.001.006.00---------------------------1.00----------------------1.00-----------------1.00-------1.00------------------------1.00--------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAGCA...................................................................................26113.0015.00-10.002.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CGCTCTTCCCCTGACCCCAGTT................................................22110.001.003.00-----------------1.00------3.00---1.00----------------------------------------------1.00---------------------------------------------------1.00--------------------
..............................................................................................................................................TGGGGTGAGATGGGGAGGAGCAGC....................................................................................2418.008.004.00----1.00------1.00----------2.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCGCTCTTCCCCTGACCCCAG..................................................2118.008.00-------1.001.00--1.00---------------------1.00-----------------------------------------------------1.00-1.00--------------------1.00-------------------1.00------------------
....................................................................................................................................................................................CGCTCTTCCCCTGACCCCAGT.................................................2117.001.002.00----------1.00---------3.00------------1.00------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TGGGGTGAGATGGGGAGGAGCAGT....................................................................................2416.004.005.00---------------1.00------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAA.....................................................................................2415.001.003.00-----------------------------------------------------------------------------------------------------------------------1.00---------------1.00------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGC.......................................................................................2215.005.00------------------------------------------------2.00--1.00------1.00----------------------------------------------------1.00-------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAG.....................................................................................2414.004.00--------------------1.00-------1.00--------------------------------------------------------------1.00--------------------------------------------------1.00------
..............................................................................................................................................TGGGGTGAGATGGGGAGGAGCAG.....................................................................................2314.004.00-----------------------1.00--------------1.00-------------------1.00-------------------------------------------------------1.00----------------------------------
..............................................................................................................................................TGGGGTGAGATGGGGAGGAGC.......................................................................................2114.004.003.00-------------------------------------------------------------------------------------------------------------------------------------------1.00--------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCATC....................................................................................2514.001.00---4.00-------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCGCTCTTCCCCTGACCCCAGTT................................................2313.008.00----------------------------------------1.00---1.00------1.00-------------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAGTAT..................................................................................2713.004.003.00----------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TGGGGTGAGATGGGGAGGAGCAT.....................................................................................233.000.003.00----------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TGGGGTGAGATGGGGAGGAGCAGCC...................................................................................2513.003.001.00------------1.00-----------------------------------------------------------------------------------------1.00---------------------------------------------
..............................................................................................................................................TGGGGTGAGATGGGGAGGAGCAGCT...................................................................................2513.008.00-------------------3.00---------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAGT....................................................................................2513.004.003.00----------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAG........................................................................................2113.003.00------------1.00-------1.00----------------------------------------1.00---------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAGCT...................................................................................2613.0015.00--2.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................AATGAGGATGGGGTGAGATGGGAA............................................................................................243.000.00----------3.00------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TGGGGTGAGATGGGGAGGAGCAGCTT..................................................................................2612.008.002.00----------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCGCTCTTCCCCTGACCCCAGTAA...............................................2412.008.00--------------------------------------1.00----------------------------------------------------------------------------------------------------1.00---------
..............................................................................................................................................TGGGGTGAGATGGGGAGGAGCAGCCAAT................................................................................282.000.00-----2.00-----------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TGGGGTGAGATGGGGAGGAAATC.....................................................................................232.000.00---2.00-------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAGCC...................................................................................2612.002.00------1.00-------------------------1.00--------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAGCCAGCCC..............................................................................312.000.00-------------2.00---------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAGA....................................................................................2512.004.00------------------1.00-----------1.00----------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TTCCCAGTCTCTGATGGCTCT............................2112.002.00--------------------------1.00------------------------------------------------------------------1.00-------------------------------------------------------
...................................................................................................................................................................................CCGCTCTTCCCCTGACCCCAGATT...............................................2411.008.00-------------------------------------------------------------------------------------1.00---------------------------------------------------------------
...................................................................................................................................................................................CCGCTCTTCCCCTGACCCCAAT.................................................2211.001.00----------------------------------------------------------------------------------------------1.00------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGATTA......................................................................................2311.001.00-----------------------------------------1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CAGTCTCTGATGGCTCT............................1711.001.00----------------------------------------------------------------------------------1.00------------------------------------------------------------------
..............................................................................................................................................TGGGGTGAGATGGGGAGT..........................................................................................181.000.00-----------------------------------------------------------------------------------------------------------------------------------1.00-----------------
............................................................................................................................................GATGGGGTGAGATGGGGAGGAGCT......................................................................................241.000.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TGGGGTGAGATGGGGAGGAGAA......................................................................................221.000.00-------------------------------------------------------------------------------------------------------------------------------------1.00---------------
....................................................................................................................................................................................CGCTCTTCCCCTGACCCCAGAA................................................2211.001.00---------------------------------------------------------------------------------------------------1.00-------------------------------------------------
....................................................................................................................................................................................CGCTCTTCCCCTGACCCCAG..................................................2011.001.00----------------------------1.00------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGA.........................................................................................2011.001.00-----------------------------------------------------------------------------------------------1.00-----------------------------------------------------
........................................................................................................................................................................................................................GGCTCTAACTACTTTGTGCGGC............2211.001.00---------------------------1.00-------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TGGCTCTAACTACTTTGTGCGGCTCTA........2711.001.00-------------------------------------------------------1.00---------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGAA.........................................................................................201.000.00---------------------------------------------------------------------------------1.00-------------------------------------------------------------------
..............................................................................................................................................TGGGGTGAGATGGGGAGGAGT.......................................................................................211.000.00----------------1.00------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CTGATGGCTCTAACTACTTTGTGCGGCT...........2811.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCGCTCTTCCCCTGACCCCAGC.................................................2211.008.00--------------------------------------------------------------------------------------------------------------------------------------------------1.00--
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAGGAT..................................................................................2711.004.001.00----------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCA......................................................................................2311.001.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CGCTCTTCCCCTGACCCCAGTTA...............................................2311.001.00-------------------------------------------------------------------------------------------------------------------------1.00---------------------------
....................................................................................................................................................................................CGCTCTTCCCCTGACCCCATT.................................................211.000.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGA.......................................................................................2211.003.00-----------------------------------------------------------------------------------------------------------------------1.00-----------------------------
..........................................................................................................................................AGGATGGGGTGAGATATC..............................................................................................181.000.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAGCAA..................................................................................2711.0015.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCGCTCTTCCCCTGACCCCATA.................................................2211.001.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................TGAGGATGGGGTGAGATGGGA.............................................................................................211.000.00----------1.00------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAGCCAGTCCTGTCTCACCGCTCTTCCCCTGACCCCAGT.................................................601.000.00-------------------------------------------------------------------------------------------------------------1.00---------------------------------------
...................................................................................................................................................................................CCGCTCTTCCCCTGACCCCAGAA................................................2311.008.001.00----------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................TCACCGCTCTTCCCCTGACA......................................................201.000.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.....TCCCTCCCCTTGCCCCATGT.................................................................................................................................................................................................................................201.000.00--------------------------1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCGCTCTTCCCCTGACCCCA...................................................2011.001.00----------------------------------------1.00------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TGGGGTGAGATGGGGAGGAGAAAA....................................................................................241.000.00-----------------------------------------------------------------------------------1.00-----------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAGCAAA.................................................................................2811.0015.00---------------------------------------------1.00-------------------------------------------------------------------------------------------------------
................................................................................................................................TGCCGGAATGAGGATGGGG.......................................................................................................1911.001.00----------------1.00------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CGCTCTTCCCCTGACCCCAGA.................................................2111.001.00--------------------------------------------------------1.00--------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAGAA...................................................................................2611.004.00---------------------------------------------------------------1.00-------------------------------------------------------------------------------------
..................................................................................................................................................................................................................TCTGATGGCTCTAACTACTTTG..................2211.001.00-----------------------------------------------------------------------------------------------------------------------------------------------1.00-----
......................................................................................................................................................................................................................ATGGCTCTAACTACTTTGTGCGG.............2311.001.00------------------------------------------------------------1.00----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................ACTACTTTGTGCGGCT...........1611.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCGCTCTTCCCCTGACCCCAGAGA...............................................2411.008.00------------------------------------------------------------------------------------------------------------------------------1.00----------------------
...........................................................................................................................................................................................................................TCTAACTACTTTGTGCGGCTCTACACGGA..2911.001.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................AGGATGGGGTGAGATAGGT.............................................................................................191.000.00---------------------------------------------------------1.00-------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCAGTAA..................................................................................2711.004.00-------------------------------------1.00---------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GGTGAGATGGGGAGGAGCAG.....................................................................................2011.001.00-----------------------------------------------------------------1.00-----------------------------------------------------------------------------------
..............................................................................................................................................TGGGGTGAGATGGGGAGGAGCAGTAT..................................................................................2611.004.00-------------------------------------1.00---------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................AGATGGGGAGGAGCAGCCAG.................................................................................2011.001.00-----------------------------------------------------------------------------------------------------------------1.00-----------------------------------
...................................................................................................................................................................................CCGCTCTTCCCCTGACCCCGGA.................................................221.000.00------------------------------------------------------------------------------------------------------------------------------------1.00----------------
...................................................................................................................................................................................CCGCTCTTCCCCTGACCCCAT..................................................2111.001.00---------------------------------------------------------1.00-------------------------------------------------------------------------------------------
.............................................................................................................................................ATGGGGTGAGATGGGGAGGAGCATT....................................................................................2511.001.00--------------------------------------------------------------1.00--------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TGATGGCTCTAACTAC......................1620.500.50---------------------------0.50-------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCGCTCTTCCCCTGACCC.....................................................1820.500.50------0.50----------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................TGCGGCTCTACACG....1430.330.33---------------------------------------------------------------------------------------------------------------------------------------------------0.33-
..............................................................................................................................................TGGGGTGAGATGGGGAGG..........................................................................................1830.330.33--------0.33--------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GGCTCTAACTACTTT...................1570.140.14-----------------------------------------------------------0.14-----------------------------------------------------------------------------------------

Antisense strand
TGCTCTCCCTCCCCTTGCCCCCCGCCCGCCGCTCCCCTTTATCAGGTTTAGAGATTGAGCTATGCCTTCTGTTGAAAGGTTTTGAGCCTAAGAGAACATTGGAAACACTGTGTTGCATTGCCCAATACTGCCGGAATGAGGATGGGGTGAGATGGGGAGGAGCAGCCAGTCCTGTCTCACCGCTCTTCCCCTGACCCCAGGTTCCCAGTCTCTGATGGCTCTAACTACTTTGTGCGGCTCTACACGGAGC
..............................................................................................................................................((((((.....((((((((((((.((....)).))....))))))))))..))))))...................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR189782SRR037936(GSM510474)
293cand1. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM956925PAZD5GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR029131(GSM416760)
MCF7. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR040009(GSM532894)
G727T. (cervix)
SRR191579(GSM715689)
102genomic small RNA (size selected RNA from . (breast)
SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037931(GSM510469)
293GFP. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577742(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
GSM532884(GSM532884)
G871T. (cervix)
TAX577740(Rovira)
total RNA. (breast)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR040032(GSM532917)
G603N. (cervix)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)
SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
GSM416733(GSM416733)
HEK293. (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191526(GSM715636)
127genomic small RNA (size selected RNA from . (breast)
SRR040041(GSM532926)
G612T. (cervix)
SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR040028(GSM532913)
G026N. (cervix)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191524(GSM715634)
119genomic small RNA (size selected RNA from . (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM532876(GSM532876)
G547T. (cervix)
.................CCCCCCGCCCGCCGCGGGG...................................................................................................................................................................................................................... 1919.000.00----4.00-1.00-------3.00--1.00-----------------1.00----------------2.00---------------------1.00---------------1.00----------1.00-------------1.00--1.00-----1.00-------------------1.00----
...................CCCCGCCCGCCGCTCCCCTTTC................................................................................................................................................................................................................. 223.000.00---3.00-------------------------------------------------------------------------------------------------------------------------------------------------
.................CCCCCCGCCCGCCGCGCGG...................................................................................................................................................................................................................... 193.000.00----1.00------------------------------1.00---------------------------------------------------------------------------------1.00-------------------------------
.................CCCCCCGCCCGCCGCGGGC...................................................................................................................................................................................................................... 193.000.00--------------1.00--------------------------1.00---------------------------------------------------------------1.00-------------------------------------------
.................CCCCCCGCCCGCCGC.......................................................................................................................................................................................................................... 1503.003.00-------------------------------2.001.00--------------------------------------------------------------------------------------------------------------------
.................CCCCCCGCCCGCCGCGGG....................................................................................................................................................................................................................... 182.000.00-----------------------------------------------------------------------------1.00-----------------------------------------------1.00-----------------------
..............................................................TGCCTTCTGTTGAAAGGC.......................................................................................................................................................................... 181.000.00---------------------------------------------1.00-------------------------------------------------------------------------------------------------------
.GCTCTCCCTCCCCTTTCTG...................................................................................................................................................................................................................................... 191.000.00----------------------------------------------------------------------1.00------------------------------------------------------------------------------
.................CCCCCCGCCCGCCGCTGGA...................................................................................................................................................................................................................... 191.000.00--------------------------------------------------------------------------------------------------------------------------1.00--------------------------
.GCTCTCCCTCCCCTTGTCC...................................................................................................................................................................................................................................... 191.000.00------------------------------------------------------------------1.00----------------------------------------------------------------------------------
................GCCCCCCGCCCGCCGTG......................................................................................................................................................................................................................... 171.000.00------------------------------------------------------------------------------------------------1.00----------------------------------------------------
.................CCCCCCGCCCGCCGCTCGGCG.................................................................................................................................................................................................................... 211.000.00-------------------------------------------------------1.00---------------------------------------------------------------------------------------------
.................CCCCCCGCCCGCCGCTG........................................................................................................................................................................................................................ 171.000.00---------------------------------------------------------------------------1.00-------------------------------------------------------------------------
.GCTCTCCCTCCCCTTGCTCTG.................................................................................................................................................................................................................................... 211.000.00------------1.00----------------------------------------------------------------------------------------------------------------------------------------
.................CCCCCCGCCCGCCGCGCGC...................................................................................................................................................................................................................... 191.000.00----1.00------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GCTCTTCCCCTGACCCCA................................................... 1811.001.00----------------------------------------------------------------------------------------------------1.00------------------------------------------------
....................CCCGCCCGCCGCTCCCCTTATC................................................................................................................................................................................................................ 221.000.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.................CCCCCCGCCCGCCGCGGTG...................................................................................................................................................................................................................... 191.000.00---------------------------------------------------------------------------------------------------------------------------------------1.00-------------
..............................................................................................................TGTTGCATTGCCCAAGCT.......................................................................................................................... 181.000.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------
..............TTGCCCCCCGCCCGCCGCCGG....................................................................................................................................................................................................................... 211.000.00-----------------1.00-----------------------------------------------------------------------------------------------------------------------------------
....................CCCGCCCGCCGCTCCCCTT................................................................................................................................................................................................................... 191.000.00-----------------1.00-----------------------------------------------------------------------------------------------------------------------------------
...............TGCCCCCCGCCCGCCGCGG........................................................................................................................................................................................................................ 191.000.00-------------------------------------------------------------------------------------------------------------------------------1.00---------------------
...............TGCCCCCCGCCCGCCGCGCA....................................................................................................................................................................................................................... 201.000.00-----------------------------------------------------1.00-----------------------------------------------------------------------------------------------
.....................CCGCCCGCCGCTCCCCCG................................................................................................................................................................................................................... 181.000.00-------------------------------------------------------------------------------------------------1.00---------------------------------------------------
...............................................................................................ACATTGGAAACACTGCGGC........................................................................................................................................ 191.000.00--------------------------------------------------------------------------------1.00--------------------------------------------------------------------
...................CCCCGCCCGCCGCTCCC...................................................................................................................................................................................................................... 1760.170.17----------------------------------------------------------------------------------------------------------------------------------------------------0.17