ID: hsa-mir-6807
GENE: TRIM28(15)
chr19:59061602-59061793+


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(5)
AGO2.ip
(1)
AGO3.ip
(16)
B-CELL
(10)
BRAIN
(19)
BREAST
(74)
CELL-LINE
(12)
CERVIX
(1)
FIBROBLAST
(6)
HEART
(11)
HELA
(10)
LIVER
(3)
OTHER
(2)
RRP40.ip
(48)
SKIN
(1)
TESTES
(3)
UTERUS
(1)
XRN.ip

Sense strand
TTGCCCAGGATGTGGGCCGCATGTTCAAGCAATTCAACAAGTTAACTGAGGTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCTTGGCCCAGGACAAGGCAGACGTGCAGTCCATCATCGGCCTGCAGCGCTTCTTCGAGAC
...................................................((.((((((((((((.((.((..(((((...(((.....((..........)).....))).))))))).)).)))))).))).))).))...................................................
..................................................51.........................................................................................142................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR189786SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR189787SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
DRR001482(DRX001036)
Hela long total cell fraction, control. (hela)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
DRR001483(DRX001037)
Hela long cytoplasmic cell fraction, control. (hela)
GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR038860(GSM458543)
MM426. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR029128(GSM416757)
H520. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
GSM359202(GSM359202)
hepg2_untreated_a. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189785SRR038857(GSM458540)
D20. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR040015(GSM532900)
G623T. (cervix)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
GSM416733(GSM416733)
HEK293. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
GSM359203(GSM359203)
hepg2_untreated_b. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR029126(GSM416755)
143B. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR029129(GSM416758)
SW480. (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR040011(GSM532896)
G529T. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR040035(GSM532920)
G001T. (cervix)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR037931(GSM510469)
293GFP. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040022(GSM532907)
G575N. (cervix)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
TAX577743(Rovira)
total RNA. (breast)
SRR189784SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191435(GSM715545)
172genomic small RNA (size selected RNA from . (breast)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577744(Rovira)
total RNA. (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040007(GSM532892)
G601T. (cervix)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR040024(GSM532909)
G613N. (cervix)
GSM359212(GSM359212)
hepg2_biotin_hl_2b. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR038858(GSM458541)
MEL202. (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
GSM359211(GSM359211)
hepg2_biotin_hl_2a. (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
GSM359186(GSM359186)
hepg2_untrtd. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040030(GSM532915)
G013N. (cervix)
SRR038863(GSM458546)
MM603. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR029131(GSM416760)
MCF7. (cell line)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189783SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR040029(GSM532914)
G026T. (cervix)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR038854(GSM458537)
MM653. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR029124(GSM416753)
HeLa. (hela)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Paz8D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................................GTGAGCCAGTGGAATGGAGAGG........................................................................................................................221220.00220.00-16.0023.00-47.0025.00-11.0015.001.001.006.004.001.00--1.001.00----3.001.002.00-2.001.002.00-4.00-----1.001.00---1.00--1.00---2.00--4.00---1.002.00-3.00--1.002.00----1.001.002.00-3.00--3.00--2.00----1.00----1.001.00---2.00----2.00-1.00--2.00-1.00---2.00-----1.00--------------------1.00--------------------1.00-------1.001.00--------------1.001.00-------1.00--1.00---------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCTTGGCCCAG..................................................921154.00154.0084.00--56.00---------------7.00-------------7.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGC.......................................................................................................................231131.00131.00-33.0015.00-23.004.00-2.0012.00-1.00--10.00------2.002.00---4.002.002.003.00-----3.00------------2.00-------1.00----------1.00---------1.00----1.00--1.00----1.00-------------------1.00--1.00--1.00---------------------------------------1.00--------------------------------------1.00-------------------------
...................................................TGAGCCAGTGGAATGGAGAGG........................................................................................................................21174.0074.00-7.0011.00-6.0015.002.0016.00----3.00----1.00---1.001.00-----------------------1.00---------1.00------2.00------3.00-------------------1.00-----------------------1.00--------------------------------------------------------------------------------1.00------1.00-----------------
..................................................GTGAGCCAGTGGAATGGAGA..........................................................................................................................20167.0067.00--2.00--2.0012.007.00--1.00---------1.00-1.003.00------------1.001.00-----1.00--4.00-----3.001.00-----2.002.00---2.00-------------2.00---------------1.00-----1.00--1.00-------------2.001.001.00-------1.00-------------------1.00-1.001.00---1.00--1.00-1.001.00----------1.00--------------1.001.00-----------1.00--------------------
...................................................TGAGCCAGTGGAATGGAGAGGC.......................................................................................................................22161.0061.00-29.001.00--3.006.003.005.00-----5.00--1.001.00-----3.001.001.00---1.00--------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCTTGGCCCAGT.................................................93153.00154.0024.00--27.00---------------2.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGCCCAGT.................................................24141.007.00-4.00---1.0010.00--2.002.00-----5.00-------4.00---1.00---2.00-2.00-1.00--------------------------------------1.00-------------------1.00------------------------1.00-------1.00-------------1.00-1.00---------------------------------------1.00-----------------------------------
..................................................GTGAGCCAGTGGAATGGAGAG.........................................................................................................................21136.0036.00-3.002.00-1.001.00----1.00-1.00---1.00------1.00-----------2.00-1.001.004.00-2.00-1.002.00---------2.001.00-----------1.00------------------1.00----------------------1.001.00----------------------------------------1.001.00-----1.00------------------1.00--------------------------1.00---------------
..................................................GTGAGCCAGTGGAATGGAGAGGCT......................................................................................................................24132.0032.00-9.004.00----2.001.001.00----7.00----------1.001.00-----------1.00---1.00--------------------------------1.00---------1.00-----------------------------------------------1.00--1.00-----------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCA......................................................................................................................24128.00131.00-3.003.00-4.001.007.00-1.00-1.00---------1.00-----1.001.001.00---1.00---2.00-----------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGCCCAGA.................................................24127.007.00-12.001.00----1.00-1.00-------------1.00-------6.001.00---1.00-----------------1.00-------------------------------------------------------------------------------------------1.00-------------------------------------------------------------1.00-----------
..................................................GTGAGCCAGTGGAATGGAGAGGCAT.....................................................................................................................25123.00131.00--12.00-3.002.001.00-2.001.00-----------1.00-----------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAG...........................................................................................................................19120.0020.00-----2.00-2.00--1.00--4.00----4.00-2.00----------------1.00-------------------1.00----------------------------------------------1.00-1.00-------------------------1.00---------------------------------------------------------------------------------------
........................................................................................................................ACTGCATTCCTGCTTGGCCCAGT.................................................2317.000.00-3.00---------13.00--------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTT.....................................................................................................................25115.0032.00-2.00----6.002.00----------------------2.00---------1.00------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------1.00--------------
..................................................GTGAGCCAGTGGAATGGAGAGGT.......................................................................................................................23114.00220.00--4.00-6.00--------1.00-----------------1.00------------------------1.00------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCAA.....................................................................................................................25112.00131.00------9.00--------------------2.00----------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCAT.....................................................................................................................24112.0061.00--4.00-----1.00------------------------------2.00---1.00--------------------------------1.00-------------------------------------------1.00------------------------------------------1.00--------1.00-----------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCT......................................................................................................................23112.0012.00-1.00---2.00-3.00-1.001.001.00----------2.00-----------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGA.......................................................................................................................23112.00220.00-2.005.00-1.00--1.00---------------1.00-------------------------------------------------------------------------------------------------------------------1.00-----1.00--------------------------------------------------------------------------
..........................................................................GTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCTTGGCCCAG..................................................68111.0011.0011.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................CAACAAGTTAACTGAGG.............................................................................................................................................17111.0011.00------------------------------------------------------------1.00---------------1.00---------------------1.00----------------------1.00----1.00---1.00------------------------------------1.00-----1.00--1.00----------------1.00-------------1.00------------
...........................................................................TGGGCAGGGGGAGATGTGAAGGA..............................................................................................23110.0010.00-8.00---------------------------------------------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCAA.....................................................................................................................24110.0061.00-----2.002.00-1.00---------2.00--------------------------3.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCTTGGCCC....................................................90110.0010.0010.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................TCAACAAGTTAACTGAG..............................................................................................................................................1719.009.00----------------------1.00------8.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAG.........................................................................................................................2019.009.00-----2.00-2.00----2.00----------1.00------------------------1.00---------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------
..................................CAACAAGTTAACTGAGGA............................................................................................................................................1818.0011.00------------1.00------------------------------------------------------------------1.00---------------------2.00----------------------1.00--------------------------------------------------1.00-------1.00------------1.00-----------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCAT..........................................................................6818.008.008.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCTTGGCCCA...................................................9118.008.006.00--2.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTG.....................................................................................................................2518.008.00--------1.002.004.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGCCCAG..................................................2317.007.00-1.00--------2.00------1.00----1.00---------------1.00------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGA........................................................................................................................2217.0036.00-------1.00--1.00-1.00-------------------1.00-1.00-----------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------1.00----------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCT.............................................................8117.007.007.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCA......................................................................................................................2316.0061.00-----4.00------------1.00---------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGACAAGGCAGACGTGCA.................................1916.006.00-----------------------------------1.00----1.00---------------------1.00------------------------1.00--------1.00---------------------------------------------------1.00-----------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGC......................................................1916.006.00-------1.00---2.001.00--------2.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCTTGGCCCAGTTT...............................................9516.00154.00---6.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCAAT....................................................................................................................2616.00131.00--------2.00---2.00---------------------------1.00---------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCATC....................................................................................................................2515.0061.00---------------5.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGCCCAGC.................................................2415.007.00---------5.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................TGGGCAGGGGGAGATGTGAAGG...............................................................................................2215.005.00------5.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGC...................................................................7515.005.00---5.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCAA......................................................................725.000.005.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTTT....................................................................................................................2615.0032.00--------2.00--------------------------------1.00-------------------1.00------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCC......................................................................................................................2415.00131.00---------3.00-------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCTTGGCCCAGT.................................................925.000.005.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......AGGATGTGGGCCGCATGTTC......................................................................................................................................................................2014.004.00--------------------------------------1.00---1.00------------1.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCCG.....................................................................................................................2514.00131.00---------4.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGACAAGGCAGACGTGCAGT...............................2114.004.00------------------------------------------------------1.00------1.00------------------------------------------------------------2.00-------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCTTGGCCCAGA.................................................9314.00154.004.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCATT....................................................................................................................2614.00131.00--4.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCGATC...................................................................................................................2714.00131.00---------------4.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CAGTCCATCATCGGCCTGCAGCGCTTCTCCG....313.000.00--------------------------------------------------1.00---------------------2.00---------------------------------------------------------------------------------------------------------------------------------------------------
..................................CAACAAGTTAACTGAGGACA..........................................................................................................................................2013.0011.00-------------------------------------1.00------------------------------1.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------
...............................ATTCAACAAGTTAACTGAG..............................................................................................................................................1913.003.00-------------------------------------------------2.00-----------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGATC.....................................................................................................................2513.00220.00---------------3.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGACAAGGCAGACGTGCAG................................2013.003.00--2.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------
......AGGATGTGGGCCGCATGTT.......................................................................................................................................................................1913.003.00----------------------------------------1.00---------------------------------------------------------------------------1.00-----------------------1.00-------------------------------------------------------------------------------
........................................................CAGTGGAATGGAGAGC........................................................................................................................163.000.00------------------------------------------------------------------1.00--------1.00----------------------------------------------------------------------------------------------------------------------------------1.00-------------
..................................................................................................................................................................CATCATCGGCCTGCAGCGC...........1913.003.00--------------3.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCT..........................................................8313.003.00-----------------------------------------------------------------3.00----------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGACAAGGCAGACGTGCAGTC..............................2213.003.00--------------------------------------1.00----------1.00------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAAA..........................................................................................................................2042.502.00-------------------------------------0.50---------------------0.25------------------0.25---------------------------------------------0.25-0.25-----------------------------------------------------------------------------------0.500.25---0.25----
.......................................................................................................................CACTGCATTCCTGCTTGGCC.....................................................2012.002.00------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------1.00-----------------------------
...CCCAGGATGTGGGCCGCATGTAA......................................................................................................................................................................2312.001.00---------------------------------------------------------------------------------------------------------------2.00------------------------------------------------------------------------------------------------------------
..................................................................................................AAGAACTAGGACCCATTCATC.........................................................................2112.002.00----------2.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................CCTGCAGCGCTTCTTCGAGA.2012.002.00---------------------2.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAA.........................................................................................................................2112.0067.00-------------------------------------1.00------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGC................................................................................................................3012.002.00---------1.00----------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCCT.....................................................................................................................2512.00131.00------1.00--1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....CAGGATGTGGGCCGCATGT........................................................................................................................................................................1912.002.00------------------------------------------1.00----------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCTAT....................................................................................................................2512.0012.00-----------------------------------------------------------------------------------------1.00----------------------1.00-----------------------------------------------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGCCCAGTGTT..............................................2712.007.00----------------2.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGCCCATT.................................................242.000.00----------1.00-------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGG.......................................................................................................................2312.00220.00--------------------1.00----------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.......................TTCAAGCAATTCAACAAGTTAACTGAG..............................................................................................................................................2712.002.00--2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....CAGGATGTGGGCCGCATGTTCA.....................................................................................................................................................................2212.002.00-----------------------------------------------------1.00-----------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCATAG...................................................................................................................2712.00131.00--2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................AAGCAATTCAACAAGTTAACTGAGGACA..........................................................................................................................................282.000.00--2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................TGTGGGCAGGGGGAGATGTGA..................................................................................................2112.002.00------------1.00--------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTTC....................................................................................................................2612.0032.00---------2.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGAA......................................................................................................................2312.0074.00--1.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....CAGGATGTGGGCCGCATGTT.......................................................................................................................................................................2012.002.00------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------
.............................................................................................................CCCATTCATCCACTGCATTCCT.............................................................2212.002.00----------------2.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGAAGA..........................................................................................................................202.000.00------------1.00------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGA....................................................................................................................2612.008.00-----------------------------------------------------------1.00------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCGT.....................................................................................................................2412.0061.00--2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................GTGAAGGAAAGAACTCTG....................................................................................182.000.00-------------------------------------------------------------------------------1.00----------------1.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCGC.....................................................................................................................2512.00131.00---------2.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGA............................................................................................................................1842.002.00--0.75---------0.25---------------------------------------------0.50--------------------------------------------------------------------------------------------------------------------------------------------------------0.25----0.25---
.......................................................................................................................CACTGCATTCCTGCTTGGCCCAAC.................................................242.000.00---------2.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAC.........................................................................................................................2112.0067.00--2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....CCAGGATGTGGGCCGCATG.........................................................................................................................................................................1912.002.00----------------------------------------1.00------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCTTGGCCCAGTA................................................9412.00154.002.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................GCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCTTGGCCCAG..................................................8812.002.00-------------------2.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGA........................................................................................................................2111.009.00-----------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGCCCAGTT................................................2511.007.00--------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGACAAGGCAGACGTCA..................................181.000.00----------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGTTT.....................................................................................................................2511.00220.00--------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................CAACAAGTTAACTGAGGAC...........................................................................................................................................1911.0011.00--------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................GAGCCAGTGGAATGGAGAGG........................................................................................................................2011.001.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGATGC.......................................................................................................................2311.0067.00--------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCAAC....................................................................................................................2611.00131.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................AATTCAACAAGTTAACTGAGGA............................................................................................................................................221.000.00---------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAAAA.......................................................................................................................2311.0067.00-----------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGAAT.....................................................................................................................2411.0074.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGCA...............................................................................................................3111.001.00---------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGT..........................................................................................................................2011.0020.00-------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................CGGCCTGCAGCGCTTCTTC.....1911.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGCCCAGAC................................................2511.007.00------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.........................................................................TGTGGGCAGGGGGAGATGTGAA.................................................................................................2211.001.00-------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................AGCAATTCAACAAGTTAA...................................................................................................................................................1811.001.00---------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCCG.....................................................................................................................2411.0061.00---------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................GGAGATGTGAAGGAAAGAACTAGGACCCA...............................................................................2911.001.00----------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGCGGC.......................................................................................................................2311.0020.00-------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................CATCGGCCTGCAGCG............1511.001.00---------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
...CCCAGGATGTGGGCCGCATGTT.......................................................................................................................................................................2211.001.00-----------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCTTGGCCCCGT.................................................9311.0010.00-------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGACAAGGCAGACGTGCAGGC..............................2211.003.00-------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGA..........................................................................................................................1911.001.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGCGG..................................................................................................................2811.008.00--------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......AGGATGTGGGCCGCATGTTCA.....................................................................................................................................................................2111.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGAT......................................................................................................................2411.00220.00-------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
....................................ACAAGTTAACTGAGGAC...........................................................................................................................................171.000.00---------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
...............................................GAGGTGAGCCAGTGGAATGGACCGG........................................................................................................................251.000.00--------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGACAAGGCAGACGTGCAGTCCA............................2411.001.00------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....CAGGATGTGGGCCGCACG.........................................................................................................................................................................181.000.00-----------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGC........................................................................................................................2211.0036.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGT.......................................................................................................................2211.0074.00-------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................TCAACAAGTTAACTGAGGACAA.........................................................................................................................................221.000.00-----------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGTA......................................................................................................................2411.00220.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................CAACAAGTTAACTGAGGACAA.........................................................................................................................................2111.0011.00-------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCAC.....................................................................................................................2511.00131.00---------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGTAT.....................................................................................................................2511.00220.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................AGCCAGTGGAATGGAGAGG........................................................................................................................1911.001.00-------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGCCCAGTA................................................2511.007.00--------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCTGA....................................................................................................................251.000.00-------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGCCCAGAAT...............................................2611.007.00--------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGTG.........................................................................................................................2111.0020.00----------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
..........................................................................................GTGAAGGAAAGAACTAGGACCCATTC............................................................................2611.001.00------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................TGTGGGCAGGGGGAGATGTGAAG................................................................................................2311.001.00--------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
...CCCAGGATGTGGGCCGCATGT........................................................................................................................................................................2111.001.00-------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCAATC...................................................................................................................2711.00131.00---------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........ATGTGGGCCGCATGTTCAAGCAATTCAACAAG.......................................................................................................................................................3211.001.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................GATGTGAAGGAAAGAATGT......................................................................................191.000.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------
.....CAGGATGTGGGCCGCATGTTCAAGCA.................................................................................................................................................................2611.001.00---------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGACT.....................................................................................................................2511.00220.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................GCAGGGGGAGATGTGAAGGAAAGAACTAGGA...................................................................................3111.001.00---------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGG..................................................................................................................2811.001.00--------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................GGAGATGTGAAGGAAAGAACTAGGA...................................................................................2511.001.00---------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------
..................................................................GAGAGGCTGTGGGCAGGGGGAGATGTGAAGG...............................................................................................3111.001.00----------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCAG.....................................................................................................................2511.00131.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGGGGC.......................................................................................................................2311.0020.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................GGAGATGTGAAGGAAAGAACT.......................................................................................2111.001.00----------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGGGG..................................................................................................................2811.008.00--------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................GGGAGATGTGAAGGAAAGAACTAGG....................................................................................2511.001.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCTAA....................................................................................................................2511.0012.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAT.........................................................................................................................2111.0067.00----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................AGGCTGTGGGCAGGGGGAGAT......................................................................................................2111.001.00------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................CAATTCAACAAGTTAACTGAGGACAA.........................................................................................................................................261.000.00----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGAAAA..........................................................................................................................201.000.00--------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCAC.....................................................................................................................2411.0061.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................GTCCATCATCGGCCTGCAGCGCTTCTTCGAGA.3211.001.00---------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGT....................................................................................................................2611.001.00-------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGCCCAGTAT...............................................2611.007.00---------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGGGT........................................................................................................................2211.0020.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................CCCATTCATCCACTGCATTCCTGA...........................................................2411.001.00-----------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGCCCAGAT................................................2511.007.00---------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................AGGCTGTGGGCAGGGGGGTG.......................................................................................................201.000.00--------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................CCCATTCATCCACTGCATTCCTG............................................................2311.001.00---------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
.................................TCAACAAGTTAACTGAGGACA..........................................................................................................................................211.000.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------
..........TGTGGGCCGCATGTTCAAGC..................................................................................................................................................................2011.001.00--------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGT........................................................................................................................2211.0036.00-----------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................CAGTGGAATGGAGAGGCTGTGGG.................................................................................................................2311.001.00---------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGTAT.....................................................................................................................2411.0074.00--------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTAT....................................................................................................................2611.0032.00-------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGC........................................................................................................................2111.009.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................CAGTGGAATGGAGAGCAC......................................................................................................................181.000.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
.........................................................................................TGTGAAGGAAAGAACTCTG....................................................................................191.000.00-----------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGCTCAG..................................................2311.006.00----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGATCT....................................................................................................................2611.00220.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCAAT....................................................................................................................2511.0061.00---------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCCTA....................................................................................................................2511.0061.00---------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGACAAGGCAGACGTGCAC................................2011.006.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------
...............................................................................................GGAAAGAACTAGGACCCATTCATCC........................................................................2511.001.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCCGT....................................................................................................................2611.00131.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................AATGGAGAGGCTGTGGGCAGGGGGAGATGTGA..................................................................................................3211.001.00---------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................TCAACAAGTTAACTGAGGA............................................................................................................................................191.000.00-----------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGG.................................................................................................................2911.001.00---------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
...........................................................................................TGAAGGAAAGAACTAGG....................................................................................1711.001.00-------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAAA........................................................................................................................2211.0067.00-------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................TCCATCATCGGCCTGCAGCGC...........2111.001.00--------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................TTCAACAAGTTAACTGAGGTGAGCCAGTGGA.................................................................................................................................3111.001.00----------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCGT.....................................................................................................................2511.00131.00------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGTA.......................................................................................................................2311.0036.00-----------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGGCCC....................................................2111.001.00----------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
..........................................................................................GTGAAGGAAAGAACTAGGACCC................................................................................2211.001.00------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................AGGCTGTGGGCAGGGTC..........................................................................................................171.000.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCATT....................................................................................................................2511.0061.00-----------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
.....................TGTTCAAGCAATTCAACAAGTTAACTGAG..............................................................................................................................................2911.001.00----------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTTTT...................................................................................................................2711.0032.00----------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................TGTTCAAGCAATTCAACAAG.......................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCTTGGCCCAGTTTT..............................................9611.00154.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGTAA.....................................................................................................................2511.00220.00----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCAATT...................................................................................................................2711.00131.00---------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGAA............................................................................................................................181.000.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------
.....................................................................................................................................TTGGCCCAGGACAAGGC..........................................1711.001.00--------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGG..........................................................................................................3511.001.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...CCCAGGATGTGGGCCGCATGTTC......................................................................................................................................................................2311.001.00-----------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAGAGGCG......................................................................................................................2411.00131.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................TGTGGGCAGGGGGAGATGGGA..................................................................................................211.000.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGACAAGGCAGACGTGC..................................1811.001.00------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TCATCGGCCTGCAGCGCTTC........2011.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------
...................................................TGAGCCAGTGGAATGGAGAGGAAA.....................................................................................................................2411.0074.00-------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................TCGGCCTGCAGCGCTTCTTCG....2111.001.00---------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................GTGGAATGGAGAGGCTTTT...................................................................................................................191.000.00-----------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................AGGGGGAGATGTGAAGGAAAGAACTAGGACCC................................................................................3211.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
.....CAGGATGTGGGCCGCATGTTCAAGCAATTC.............................................................................................................................................................3011.001.00--------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................GGGAGATGTGAAGGAAAGAACTAGGACC.................................................................................2811.001.00-----------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CACTGCATTCCTGCTTGG.......................................................1880.620.62-----0.12-0.25----0.25---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................CAGTGGAATGGAGAGGCT......................................................................................................................1820.500.50---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------0.50------
...............................................................................................................................................................................CAGCGCTTCTTCGA...1440.500.50----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------0.50-----
..................................CAACAAGTTAACTGAG..............................................................................................................................................1620.500.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------0.50-------
...CCCAGGATGTGGGCCGCA...........................................................................................................................................................................1820.500.50-----------------------------------0.50----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......AGGATGTGGGCCGC............................................................................................................................................................................1460.500.50--------------------------------------------------------------------------------------------------------------------------------0.170.17-----------------------------------------------------------------------------------------0.17
..................................................GTGAGCCAGTGGAATGG.............................................................................................................................1750.400.40-------------------------------------------------------------------------------------------------------------------------------0.20------------------------------------------------------------------------------------------0.20-
..........................................................................................................................TGCATTCCTGCTTGGC......................................................1630.330.33-------------------------0.33--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGATA..........................................................................................................................2040.252.00-----------------------------------------------------------------------------------------------------------------------------0.25----------------------------------------------------------------------------------------------
..................................................GTGAGCCAGTGGAATGGAAAA.........................................................................................................................2140.252.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------0.25--
..................................................GTGAGCCAGTGGAATGGATAGG........................................................................................................................2240.252.00-----------0.25----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................TCGGCCTGCAGCG............1390.110.11-------------------------------------------------------------------------------0.11--------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
TTGCCCAGGATGTGGGCCGCATGTTCAAGCAATTCAACAAGTTAACTGAGGTGAGCCAGTGGAATGGAGAGGCTGTGGGCAGGGGGAGATGTGAAGGAAAGAACTAGGACCCATTCATCCACTGCATTCCTGCTTGGCCCAGGACAAGGCAGACGTGCAGTCCATCATCGGCCTGCAGCGCTTCTTCGAGAC
...................................................((.((((((((((((.((.((..(((((...(((.....((..........)).....))).))))))).)).)))))).))).))).))...................................................
..................................................51.........................................................................................142................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR189786SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR189787SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
DRR001482(DRX001036)
Hela long total cell fraction, control. (hela)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
DRR001483(DRX001037)
Hela long cytoplasmic cell fraction, control. (hela)
GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR038860(GSM458543)
MM426. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR029128(GSM416757)
H520. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
GSM359202(GSM359202)
hepg2_untreated_a. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189785SRR038857(GSM458540)
D20. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR040015(GSM532900)
G623T. (cervix)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
GSM416733(GSM416733)
HEK293. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
GSM359203(GSM359203)
hepg2_untreated_b. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR029126(GSM416755)
143B. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR029129(GSM416758)
SW480. (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR040011(GSM532896)
G529T. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR040035(GSM532920)
G001T. (cervix)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR037931(GSM510469)
293GFP. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040022(GSM532907)
G575N. (cervix)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
TAX577743(Rovira)
total RNA. (breast)
SRR189784SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191435(GSM715545)
172genomic small RNA (size selected RNA from . (breast)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577744(Rovira)
total RNA. (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040007(GSM532892)
G601T. (cervix)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR040024(GSM532909)
G613N. (cervix)
GSM359212(GSM359212)
hepg2_biotin_hl_2b. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR038858(GSM458541)
MEL202. (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
GSM359211(GSM359211)
hepg2_biotin_hl_2a. (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
GSM359186(GSM359186)
hepg2_untrtd. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040030(GSM532915)
G013N. (cervix)
SRR038863(GSM458546)
MM603. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR029131(GSM416760)
MCF7. (cell line)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189783SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR040029(GSM532914)
G026T. (cervix)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR038854(GSM458537)
MM653. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR029124(GSM416753)
HeLa. (hela)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Paz8D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
........................................................................................................................................GCCCAGGACAAGGCAGACTAGA.................................. 221.000.00-------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TGCAGTCCATCATCGGCCT.................. 1911.001.00-----------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------
............................................................................................................................CATTCCTGCTTGGCCGGGC................................................. 191.000.00-----------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................ATCATCGGCCTGCAGCGCC.......... 191.000.00----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TCATCGGCCTGCAGCGC........... 1711.001.00----------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GACAAGGCAGACGTGACA................................ 181.000.00-----------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GACAAGGCAGACGTGACG................................ 181.000.00-----------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
......................................AAGTTAACTGAGGTGAGTTCT..................................................................................................................................... 211.000.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------
..................GCATGTTCAAGCAATTCAACAAG....................................................................................................................................................... 2311.001.00-----------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------
........................................................................................................................................................................CGGCCTGCAGCGCTTCTT...... 1811.001.00------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................TTCCTGCTTGGCCCAACT................................................ 181.000.00-------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................CATCGGCCTGCAGCGCGCA........ 191.000.00----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............GCCGCATGTTCAAG................................................................................................................................................................... 1420.500.50---------------------------------------------------------------------------------------------------------------------------0.50------------------------------------------------------------------------------------------------
.......................................................................................................................................................GACGTGCAGTCCATC.......................... 1520.500.50------------------------------------0.50---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................CTAGGACCCATTCAT.......................................................................... 1550.200.20--------------------------0.20-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................GCATTCCTGCTTGGC...................................................... 1560.170.17------------------------------------------------------------0.17---------------------------------------------------------------------------------------------------------------------------------------------------------------